Click on the log titles below to expand the log entries present in this DC resource.
dclab-export_2024-07-10_18.07.20
{"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc
{
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "83ed05267401691eb781ac4cc1f36641",
"name": "M1_20170616_1341_dsRNA_O1_col.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "16:07:40"
}
}
dclab-tdms2rtdc-warnings
LimitingExportSizeWarning
in dclab.rtdc_dataset.export line 305:
Not all features have the same length! Limiting output event count to 8145 (max 8146) in '8145'.
FG_Config.mcf
[Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;
[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;
[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini
[Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6
[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini
[EVENT LOG] fRT-DC V1.06170206
Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 24.9457
Start pulse train for BG Aquisition..
Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 2.10616e+008
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 550 frames Cell Events: 8 mean_circ: 0.954469
Ran for 1050 frames Cell Events: 24 mean_circ: 0.94465
Ran for 1550 frames Cell Events: 37 mean_circ: 0.944117
Ran for 2050 frames Cell Events: 52 mean_circ: 0.946745
Ran for 2550 frames Cell Events: 66 mean_circ: 0.945961
Ran for 3550 frames Cell Events: 92 mean_circ: 0.948797
Ran for 4550 frames Cell Events: 118 mean_circ: 0.950313
Ran for 5550 frames Cell Events: 152 mean_circ: 0.950973
Ran for 6050 frames Cell Events: 163 mean_circ: 0.950686
Ran for 6550 frames Cell Events: 171 mean_circ: 0.950755
Ran for 7550 frames Cell Events: 205 mean_circ: 0.949873
Ran for 8050 frames Cell Events: 213 mean_circ: 0.950062
Ran for 8550 frames Cell Events: 224 mean_circ: 0.949849
Ran for 9050 frames Cell Events: 236 mean_circ: 0.950598
Ran for 9550 frames Cell Events: 256 mean_circ: 0.950865
Ran for 10550 frames Cell Events: 283 mean_circ: 0.950471
Ran for 11050 frames Cell Events: 291 mean_circ: 0.950876
Ran for 11550 frames Cell Events: 301 mean_circ: 0.950701
Ran for 12050 frames Cell Events: 320 mean_circ: 0.950759
Ran for 12550 frames Cell Events: 330 mean_circ: 0.950638
Ran for 13050 frames Cell Events: 344 mean_circ: 0.950983
Ran for 13550 frames Cell Events: 360 mean_circ: 0.951081
Ran for 14050 frames Cell Events: 372 mean_circ: 0.950964
Ran for 14550 frames Cell Events: 394 mean_circ: 0.95103
Ran for 15050 frames Cell Events: 403 mean_circ: 0.951195
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Ran for 21050 frames Cell Events: 544 mean_circ: 0.950233
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Ran for 25050 frames Cell Events: 663 mean_circ: 0.948914
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Ran for 33550 frames Cell Events: 876 mean_circ: 0.949249
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Ran for 35050 frames Cell Events: 901 mean_circ: 0.949066
Ran for 35550 frames Cell Events: 914 mean_circ: 0.94911
Ran for 36050 frames Cell Events: 935 mean_circ: 0.948943
Ran for 36550 frames Cell Events: 941 mean_circ: 0.948999
Ran for 37050 frames Cell Events: 952 mean_circ: 0.949127
Ran for 37550 frames Cell Events: 961 mean_circ: 0.949103
Ran for 38550 frames Cell Events: 979 mean_circ: 0.949118
Ran for 39050 frames Cell Events: 994 mean_circ: 0.949192
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Ran for 40050 frames Cell Events: 1015 mean_circ: 0.949278
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Ran for 61050 frames Cell Events: 1472 mean_circ: 0.949192
Ran for 62050 frames Cell Events: 1499 mean_circ: 0.949255
Ran for 63550 frames Cell Events: 1543 mean_circ: 0.94891
Ran for 64050 frames Cell Events: 1563 mean_circ: 0.948986
Ran for 65050 frames Cell Events: 1596 mean_circ: 0.949123
Ran for 65550 frames Cell Events: 1603 mean_circ: 0.949117
Ran for 66050 frames Cell Events: 1619 mean_circ: 0.94899
Ran for 67050 frames Cell Events: 1651 mean_circ: 0.949168
Ran for 67550 frames Cell Events: 1659 mean_circ: 0.949044
Ran for 68050 frames Cell Events: 1669 mean_circ: 0.949049
Ran for 68550 frames Cell Events: 1682 mean_circ: 0.949159
Ran for 69050 frames Cell Events: 1692 mean_circ: 0.949116
Ran for 70050 frames Cell Events: 1719 mean_circ: 0.94908
Ran for 70550 frames Cell Events: 1731 mean_circ: 0.949128
Ran for 71050 frames Cell Events: 1741 mean_circ: 0.949238
Ran for 72050 frames Cell Events: 1756 mean_circ: 0.949124
Ran for 72550 frames Cell Events: 1771 mean_circ: 0.949121
Ran for 73050 frames Cell Events: 1786 mean_circ: 0.949105
Ran for 75050 frames Cell Events: 1833 mean_circ: 0.94907
Ran for 75550 frames Cell Events: 1846 mean_circ: 0.949187
Ran for 76550 frames Cell Events: 1875 mean_circ: 0.949291
Ran for 77050 frames Cell Events: 1892 mean_circ: 0.949207
Ran for 77550 frames Cell Events: 1905 mean_circ: 0.949164
Ran for 78050 frames Cell Events: 1922 mean_circ: 0.949304
Ran for 78550 frames Cell Events: 1929 mean_circ: 0.949266
Ran for 79050 frames Cell Events: 1936 mean_circ: 0.949285
Ran for 79550 frames Cell Events: 1946 mean_circ: 0.949328
Ran for 80050 frames Cell Events: 1957 mean_circ: 0.949253
Ran for 80550 frames Cell Events: 1970 mean_circ: 0.949331
Ran for 81050 frames Cell Events: 1982 mean_circ: 0.949317
Ran for 82550 frames Cell Events: 2040 mean_circ: 0.949294
Ran for 83550 frames Cell Events: 2067 mean_circ: 0.949207
Ran for 85050 frames Cell Events: 2119 mean_circ: 0.949028
Ran for 85550 frames Cell Events: 2134 mean_circ: 0.948978
Ran for 86050 frames Cell Events: 2149 mean_circ: 0.948786
Ran for 86550 frames Cell Events: 2166 mean_circ: 0.948524
Ran for 87050 frames Cell Events: 2177 mean_circ: 0.948545
Ran for 87550 frames Cell Events: 2187 mean_circ: 0.948499
Ran for 88550 frames Cell Events: 2217 mean_circ: 0.94863
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Ran for 89550 frames Cell Events: 2238 mean_circ: 0.948572
Ran for 90050 frames Cell Events: 2248 mean_circ: 0.948507
Ran for 90550 frames Cell Events: 2260 mean_circ: 0.948427
Ran for 91050 frames Cell Events: 2268 mean_circ: 0.94845
Ran for 91550 frames Cell Events: 2279 mean_circ: 0.948434
Ran for 92050 frames Cell Events: 2292 mean_circ: 0.948382
Ran for 92550 frames Cell Events: 2299 mean_circ: 0.948304
Ran for 93050 frames Cell Events: 2313 mean_circ: 0.948184
Ran for 93550 frames Cell Events: 2328 mean_circ: 0.948249
Ran for 94050 frames Cell Events: 2333 mean_circ: 0.948284
Ran for 95050 frames Cell Events: 2374 mean_circ: 0.948263
Ran for 95550 frames Cell Events: 2382 mean_circ: 0.948297
Ran for 96050 frames Cell Events: 2387 mean_circ: 0.948329
Ran for 97050 frames Cell Events: 2411 mean_circ: 0.948341
Ran for 98050 frames Cell Events: 2437 mean_circ: 0.948293
Ran for 99550 frames Cell Events: 2504 mean_circ: 0.948174
Ran for 100050 frames Cell Events: 2518 mean_circ: 0.948171
Ran for 101050 frames Cell Events: 2546 mean_circ: 0.947958
Ran for 101550 frames Cell Events: 2558 mean_circ: 0.947999
Ran for 102050 frames Cell Events: 2569 mean_circ: 0.947916
Ran for 103050 frames Cell Events: 2595 mean_circ: 0.947879
Ran for 104050 frames Cell Events: 2622 mean_circ: 0.94788
Ran for 104550 frames Cell Events: 2632 mean_circ: 0.947937
Ran for 105050 frames Cell Events: 2641 mean_circ: 0.947967
Ran for 105550 frames Cell Events: 2653 mean_circ: 0.947994
Ran for 106050 frames Cell Events: 2667 mean_circ: 0.947981
Ran for 106550 frames Cell Events: 2675 mean_circ: 0.947855
Ran for 107050 frames Cell Events: 2683 mean_circ: 0.947893
Ran for 107550 frames Cell Events: 2693 mean_circ: 0.947919
Ran for 108050 frames Cell Events: 2701 mean_circ: 0.947904
Ran for 108550 frames Cell Events: 2716 mean_circ: 0.947893
Ran for 109050 frames Cell Events: 2725 mean_circ: 0.947882
Ran for 109550 frames Cell Events: 2732 mean_circ: 0.947918
Ran for 110050 frames Cell Events: 2748 mean_circ: 0.947915
Ran for 111050 frames Cell Events: 2779 mean_circ: 0.947938
Ran for 111550 frames Cell Events: 2796 mean_circ: 0.947981
Ran for 113050 frames Cell Events: 2841 mean_circ: 0.947936
Ran for 113550 frames Cell Events: 2851 mean_circ: 0.948006
Ran for 114050 frames Cell Events: 2865 mean_circ: 0.948001
Ran for 114550 frames Cell Events: 2879 mean_circ: 0.948015
Ran for 115050 frames Cell Events: 2893 mean_circ: 0.948084
Ran for 115550 frames Cell Events: 2915 mean_circ: 0.948029
Ran for 116050 frames Cell Events: 2923 mean_circ: 0.948018
Ran for 116550 frames Cell Events: 2935 mean_circ: 0.948017
Ran for 117050 frames Cell Events: 2947 mean_circ: 0.948015
Ran for 118050 frames Cell Events: 2973 mean_circ: 0.948085
Ran for 118550 frames Cell Events: 2985 mean_circ: 0.948111
Ran for 119050 frames Cell Events: 2995 mean_circ: 0.948098
Ran for 119550 frames Cell Events: 3001 mean_circ: 0.948052
Ran for 120550 frames Cell Events: 3025 mean_circ: 0.947945
Ran for 121050 frames Cell Events: 3038 mean_circ: 0.947937
Ran for 121550 frames Cell Events: 3057 mean_circ: 0.947938
Ran for 122550 frames Cell Events: 3096 mean_circ: 0.94786
Ran for 123050 frames Cell Events: 3106 mean_circ: 0.94788
Ran for 124050 frames Cell Events: 3141 mean_circ: 0.947958
Ran for 124550 frames Cell Events: 3156 mean_circ: 0.947965
Ran for 125050 frames Cell Events: 3171 mean_circ: 0.947921
Ran for 125550 frames Cell Events: 3181 mean_circ: 0.947888
Ran for 126050 frames Cell Events: 3192 mean_circ: 0.947887
Ran for 126550 frames Cell Events: 3207 mean_circ: 0.947875
Ran for 127050 frames Cell Events: 3210 mean_circ: 0.947877
Ran for 128050 frames Cell Events: 3233 mean_circ: 0.947936
Ran for 128550 frames Cell Events: 3242 mean_circ: 0.947983
Ran for 129050 frames Cell Events: 3260 mean_circ: 0.948024
Ran for 129550 frames Cell Events: 3272 mean_circ: 0.948019
Ran for 130050 frames Cell Events: 3288 mean_circ: 0.948002
Ran for 130550 frames Cell Events: 3304 mean_circ: 0.948007
Ran for 131550 frames Cell Events: 3339 mean_circ: 0.948008
Ran for 132550 frames Cell Events: 3369 mean_circ: 0.948042
Ran for 133050 frames Cell Events: 3387 mean_circ: 0.948049
Ran for 133550 frames Cell Events: 3402 mean_circ: 0.948024
Ran for 134050 frames Cell Events: 3416 mean_circ: 0.948021
Ran for 134550 frames Cell Events: 3424 mean_circ: 0.948043
Ran for 135050 frames Cell Events: 3432 mean_circ: 0.948058
Ran for 136050 frames Cell Events: 3454 mean_circ: 0.948068
Ran for 136550 frames Cell Events: 3461 mean_circ: 0.948103
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Ran for 142050 frames Cell Events: 3589 mean_circ: 0.948102
Ran for 142550 frames Cell Events: 3599 mean_circ: 0.948088
Ran for 143050 frames Cell Events: 3624 mean_circ: 0.94805
Ran for 143550 frames Cell Events: 3636 mean_circ: 0.947971
Ran for 144550 frames Cell Events: 3653 mean_circ: 0.94796
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Ran for 146050 frames Cell Events: 3686 mean_circ: 0.947976
Ran for 146550 frames Cell Events: 3699 mean_circ: 0.947994
Ran for 147050 frames Cell Events: 3715 mean_circ: 0.948024
Ran for 148050 frames Cell Events: 3742 mean_circ: 0.947931
Ran for 149050 frames Cell Events: 3765 mean_circ: 0.947833
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Ran for 156050 frames Cell Events: 3958 mean_circ: 0.947836
Ran for 156550 frames Cell Events: 3966 mean_circ: 0.947856
Ran for 157550 frames Cell Events: 3994 mean_circ: 0.947848
Ran for 158550 frames Cell Events: 4024 mean_circ: 0.947882
Ran for 159050 frames Cell Events: 4036 mean_circ: 0.947901
Ran for 159550 frames Cell Events: 4046 mean_circ: 0.947941
Ran for 160550 frames Cell Events: 4072 mean_circ: 0.947959
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Ran for 162550 frames Cell Events: 4127 mean_circ: 0.94797
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Ran for 163550 frames Cell Events: 4154 mean_circ: 0.948007
Ran for 164050 frames Cell Events: 4170 mean_circ: 0.94802
Ran for 164550 frames Cell Events: 4175 mean_circ: 0.948025
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Ran for 165550 frames Cell Events: 4197 mean_circ: 0.948042
Ran for 166050 frames Cell Events: 4208 mean_circ: 0.948073
Ran for 166550 frames Cell Events: 4230 mean_circ: 0.948144
Ran for 167050 frames Cell Events: 4244 mean_circ: 0.948125
Ran for 168050 frames Cell Events: 4284 mean_circ: 0.948157
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Ran for 169050 frames Cell Events: 4312 mean_circ: 0.948241
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Ran for 171050 frames Cell Events: 4374 mean_circ: 0.948282
Ran for 171550 frames Cell Events: 4387 mean_circ: 0.948292
Ran for 173050 frames Cell Events: 4444 mean_circ: 0.948364
Ran for 173550 frames Cell Events: 4465 mean_circ: 0.948369
Ran for 174050 frames Cell Events: 4472 mean_circ: 0.948386
Ran for 174550 frames Cell Events: 4480 mean_circ: 0.948336
Ran for 175050 frames Cell Events: 4489 mean_circ: 0.94834
Ran for 175550 frames Cell Events: 4506 mean_circ: 0.948339
Ran for 177050 frames Cell Events: 4541 mean_circ: 0.948388
Ran for 177550 frames Cell Events: 4553 mean_circ: 0.948334
Ran for 178050 frames Cell Events: 4566 mean_circ: 0.948331
Ran for 178550 frames Cell Events: 4577 mean_circ: 0.948346
Ran for 179550 frames Cell Events: 4603 mean_circ: 0.948349
Ran for 180550 frames Cell Events: 4631 mean_circ: 0.948367
Ran for 181550 frames Cell Events: 4659 mean_circ: 0.948255
Ran for 182050 frames Cell Events: 4671 mean_circ: 0.948273
Ran for 183550 frames Cell Events: 4700 mean_circ: 0.948262
Ran for 185050 frames Cell Events: 4736 mean_circ: 0.948332
Ran for 185550 frames Cell Events: 4745 mean_circ: 0.948365
Ran for 187550 frames Cell Events: 4811 mean_circ: 0.94841
Ran for 188050 frames Cell Events: 4823 mean_circ: 0.948437
Ran for 188550 frames Cell Events: 4838 mean_circ: 0.948472
Ran for 189050 frames Cell Events: 4852 mean_circ: 0.948487
Ran for 189550 frames Cell Events: 4870 mean_circ: 0.948527
Ran for 190050 frames Cell Events: 4886 mean_circ: 0.948511
Ran for 190550 frames Cell Events: 4898 mean_circ: 0.948539
Ran for 191550 frames Cell Events: 4937 mean_circ: 0.948567
Ran for 192050 frames Cell Events: 4947 mean_circ: 0.948575
Ran for 192550 frames Cell Events: 4962 mean_circ: 0.948523
Ran for 193050 frames Cell Events: 4981 mean_circ: 0.948515
Ran for 193550 frames Cell Events: 5005 mean_circ: 0.948484
Ran for 194550 frames Cell Events: 5043 mean_circ: 0.948549
Ran for 195050 frames Cell Events: 5055 mean_circ: 0.948562
Ran for 196050 frames Cell Events: 5082 mean_circ: 0.948583
Ran for 196550 frames Cell Events: 5096 mean_circ: 0.948588
Ran for 197050 frames Cell Events: 5112 mean_circ: 0.948605
Ran for 197550 frames Cell Events: 5131 mean_circ: 0.94862
Ran for 198050 frames Cell Events: 5140 mean_circ: 0.948629
Ran for 198550 frames Cell Events: 5157 mean_circ: 0.948632
Ran for 199050 frames Cell Events: 5168 mean_circ: 0.948609
Ran for 199550 frames Cell Events: 5184 mean_circ: 0.948647
Ran for 201550 frames Cell Events: 5256 mean_circ: 0.948729
Ran for 202050 frames Cell Events: 5263 mean_circ: 0.948746
Ran for 202550 frames Cell Events: 5276 mean_circ: 0.948744
Ran for 203050 frames Cell Events: 5288 mean_circ: 0.948759
Ran for 203550 frames Cell Events: 5307 mean_circ: 0.94877
Ran for 204050 frames Cell Events: 5317 mean_circ: 0.948772
Ran for 204550 frames Cell Events: 5326 mean_circ: 0.948782
Ran for 205050 frames Cell Events: 5344 mean_circ: 0.948789
Ran for 205550 frames Cell Events: 5364 mean_circ: 0.948742
Ran for 206050 frames Cell Events: 5377 mean_circ: 0.948686
Ran for 206550 frames Cell Events: 5396 mean_circ: 0.948726
Ran for 207050 frames Cell Events: 5408 mean_circ: 0.948726
Ran for 207550 frames Cell Events: 5416 mean_circ: 0.948737
Ran for 208550 frames Cell Events: 5457 mean_circ: 0.948714
Ran for 209050 frames Cell Events: 5470 mean_circ: 0.948685
Ran for 209550 frames Cell Events: 5486 mean_circ: 0.948674
Ran for 210550 frames Cell Events: 5505 mean_circ: 0.948712
Ran for 211050 frames Cell Events: 5516 mean_circ: 0.948734
Ran for 211550 frames Cell Events: 5519 mean_circ: 0.948742
Ran for 212050 frames Cell Events: 5535 mean_circ: 0.948771
Ran for 212550 frames Cell Events: 5543 mean_circ: 0.948774
Ran for 213050 frames Cell Events: 5549 mean_circ: 0.948787
Ran for 214050 frames Cell Events: 5582 mean_circ: 0.948758
Ran for 214550 frames Cell Events: 5595 mean_circ: 0.94876
Ran for 215550 frames Cell Events: 5623 mean_circ: 0.948695
Ran for 216050 frames Cell Events: 5642 mean_circ: 0.948702
Ran for 216550 frames Cell Events: 5658 mean_circ: 0.948722
Ran for 217550 frames Cell Events: 5672 mean_circ: 0.948741
Ran for 218050 frames Cell Events: 5687 mean_circ: 0.948697
Ran for 218550 frames Cell Events: 5694 mean_circ: 0.948691
Ran for 220050 frames Cell Events: 5731 mean_circ: 0.948657
Ran for 220550 frames Cell Events: 5742 mean_circ: 0.948623
Ran for 221050 frames Cell Events: 5752 mean_circ: 0.948592
Ran for 221550 frames Cell Events: 5763 mean_circ: 0.948591
Ran for 222050 frames Cell Events: 5783 mean_circ: 0.948634
Ran for 222550 frames Cell Events: 5795 mean_circ: 0.948645
Ran for 223050 frames Cell Events: 5806 mean_circ: 0.94866
Ran for 224050 frames Cell Events: 5823 mean_circ: 0.948639
Ran for 224550 frames Cell Events: 5837 mean_circ: 0.94862
Ran for 225050 frames Cell Events: 5849 mean_circ: 0.948612
Ran for 225550 frames Cell Events: 5860 mean_circ: 0.948625
Ran for 226050 frames Cell Events: 5868 mean_circ: 0.948622
Ran for 226550 frames Cell Events: 5886 mean_circ: 0.948628
Ran for 227050 frames Cell Events: 5893 mean_circ: 0.948637
Ran for 227550 frames Cell Events: 5904 mean_circ: 0.948655
Ran for 228550 frames Cell Events: 5928 mean_circ: 0.948553
Ran for 229050 frames Cell Events: 5938 mean_circ: 0.948573
Ran for 229550 frames Cell Events: 5956 mean_circ: 0.948576
Ran for 231050 frames Cell Events: 5992 mean_circ: 0.948656
Ran for 231550 frames Cell Events: 6006 mean_circ: 0.948677
Ran for 232050 frames Cell Events: 6029 mean_circ: 0.948697
Ran for 233050 frames Cell Events: 6061 mean_circ: 0.948685
Ran for 234050 frames Cell Events: 6084 mean_circ: 0.948684
Ran for 234550 frames Cell Events: 6096 mean_circ: 0.948672
Ran for 235050 frames Cell Events: 6108 mean_circ: 0.948655
Ran for 236050 frames Cell Events: 6129 mean_circ: 0.948664
Ran for 236550 frames Cell Events: 6139 mean_circ: 0.948669
Ran for 237050 frames Cell Events: 6148 mean_circ: 0.948671
Ran for 237550 frames Cell Events: 6161 mean_circ: 0.948659
Ran for 238050 frames Cell Events: 6172 mean_circ: 0.948651
Ran for 238550 frames Cell Events: 6187 mean_circ: 0.948685
Ran for 239050 frames Cell Events: 6208 mean_circ: 0.948695
Ran for 239550 frames Cell Events: 6222 mean_circ: 0.948696
Ran for 240550 frames Cell Events: 6250 mean_circ: 0.9487
Ran for 241050 frames Cell Events: 6265 mean_circ: 0.948639
Ran for 241550 frames Cell Events: 6274 mean_circ: 0.948643
Ran for 242050 frames Cell Events: 6291 mean_circ: 0.948651
Ran for 242550 frames Cell Events: 6308 mean_circ: 0.948669
Ran for 243550 frames Cell Events: 6342 mean_circ: 0.948635
Ran for 244050 frames Cell Events: 6351 mean_circ: 0.94865
Ran for 245050 frames Cell Events: 6380 mean_circ: 0.948647
Ran for 246550 frames Cell Events: 6411 mean_circ: 0.948675
Ran for 247050 frames Cell Events: 6424 mean_circ: 0.948683
Ran for 248050 frames Cell Events: 6452 mean_circ: 0.948687
Ran for 248550 frames Cell Events: 6465 mean_circ: 0.948706
Ran for 250550 frames Cell Events: 6525 mean_circ: 0.948725
Ran for 251050 frames Cell Events: 6538 mean_circ: 0.948714
Ran for 253050 frames Cell Events: 6594 mean_circ: 0.94867
Ran for 253550 frames Cell Events: 6607 mean_circ: 0.948678
Ran for 254050 frames Cell Events: 6618 mean_circ: 0.948697
Ran for 255550 frames Cell Events: 6659 mean_circ: 0.948724
Ran for 256050 frames Cell Events: 6679 mean_circ: 0.948765
Ran for 256550 frames Cell Events: 6689 mean_circ: 0.948756
Ran for 257050 frames Cell Events: 6705 mean_circ: 0.948748
Ran for 257550 frames Cell Events: 6717 mean_circ: 0.948723
Ran for 258050 frames Cell Events: 6731 mean_circ: 0.948733
Ran for 258550 frames Cell Events: 6743 mean_circ: 0.94872
Ran for 259550 frames Cell Events: 6779 mean_circ: 0.94873
Ran for 260550 frames Cell Events: 6811 mean_circ: 0.948773
Ran for 261050 frames Cell Events: 6821 mean_circ: 0.948778
Ran for 261550 frames Cell Events: 6834 mean_circ: 0.948787
Ran for 262050 frames Cell Events: 6842 mean_circ: 0.948788
Ran for 262550 frames Cell Events: 6853 mean_circ: 0.948781
Ran for 263050 frames Cell Events: 6867 mean_circ: 0.948795
Ran for 263550 frames Cell Events: 6881 mean_circ: 0.948799
Ran for 264050 frames Cell Events: 6896 mean_circ: 0.94881
Ran for 264550 frames Cell Events: 6908 mean_circ: 0.948822
Ran for 266050 frames Cell Events: 6953 mean_circ: 0.948853
Ran for 267050 frames Cell Events: 6980 mean_circ: 0.948881
Ran for 268050 frames Cell Events: 6999 mean_circ: 0.948867
Ran for 269050 frames Cell Events: 7029 mean_circ: 0.948868
Ran for 269550 frames Cell Events: 7045 mean_circ: 0.948863
Ran for 270050 frames Cell Events: 7069 mean_circ: 0.948866
Ran for 270550 frames Cell Events: 7077 mean_circ: 0.948877
Ran for 271050 frames Cell Events: 7087 mean_circ: 0.94888
Ran for 271550 frames Cell Events: 7100 mean_circ: 0.948873
Ran for 272050 frames Cell Events: 7107 mean_circ: 0.948849
Ran for 272550 frames Cell Events: 7120 mean_circ: 0.94885
Ran for 273050 frames Cell Events: 7133 mean_circ: 0.948874
Ran for 273550 frames Cell Events: 7148 mean_circ: 0.948876
Ran for 275050 frames Cell Events: 7194 mean_circ: 0.948863
Ran for 275550 frames Cell Events: 7210 mean_circ: 0.948867
Ran for 276050 frames Cell Events: 7215 mean_circ: 0.94887
Ran for 276550 frames Cell Events: 7224 mean_circ: 0.948867
Ran for 277050 frames Cell Events: 7239 mean_circ: 0.948879
Ran for 277550 frames Cell Events: 7247 mean_circ: 0.948885
Ran for 278050 frames Cell Events: 7260 mean_circ: 0.948867
Ran for 278550 frames Cell Events: 7272 mean_circ: 0.948866
Ran for 279050 frames Cell Events: 7285 mean_circ: 0.948872
Ran for 279550 frames Cell Events: 7294 mean_circ: 0.948878
Ran for 280050 frames Cell Events: 7298 mean_circ: 0.948881
Ran for 280550 frames Cell Events: 7308 mean_circ: 0.948898
Ran for 281050 frames Cell Events: 7318 mean_circ: 0.948916
Ran for 281550 frames Cell Events: 7329 mean_circ: 0.948897
Ran for 282050 frames Cell Events: 7340 mean_circ: 0.948906
Ran for 282550 frames Cell Events: 7348 mean_circ: 0.948906
Ran for 283050 frames Cell Events: 7371 mean_circ: 0.948869
Ran for 283550 frames Cell Events: 7388 mean_circ: 0.948903
Ran for 284050 frames Cell Events: 7407 mean_circ: 0.948935
Ran for 284550 frames Cell Events: 7425 mean_circ: 0.948944
Ran for 285550 frames Cell Events: 7446 mean_circ: 0.948981
Ran for 286050 frames Cell Events: 7465 mean_circ: 0.948961
Ran for 286550 frames Cell Events: 7477 mean_circ: 0.948921
Ran for 287050 frames Cell Events: 7492 mean_circ: 0.948939
Ran for 287550 frames Cell Events: 7503 mean_circ: 0.948931
Ran for 288050 frames Cell Events: 7510 mean_circ: 0.948933
Ran for 288550 frames Cell Events: 7529 mean_circ: 0.948938
Ran for 289550 frames Cell Events: 7559 mean_circ: 0.948908
Ran for 290050 frames Cell Events: 7571 mean_circ: 0.948915
Ran for 290550 frames Cell Events: 7580 mean_circ: 0.948916
Ran for 291050 frames Cell Events: 7596 mean_circ: 0.94892
Ran for 291550 frames Cell Events: 7609 mean_circ: 0.948913
Ran for 293050 frames Cell Events: 7653 mean_circ: 0.948906
Ran for 293550 frames Cell Events: 7668 mean_circ: 0.948908
Ran for 294550 frames Cell Events: 7702 mean_circ: 0.94891
Ran for 295550 frames Cell Events: 7728 mean_circ: 0.948903
Ran for 296550 frames Cell Events: 7753 mean_circ: 0.948914
Ran for 297050 frames Cell Events: 7766 mean_circ: 0.948932
Ran for 297550 frames Cell Events: 7775 mean_circ: 0.948934
Ran for 298050 frames Cell Events: 7790 mean_circ: 0.948941
Ran for 298550 frames Cell Events: 7805 mean_circ: 0.948965
Ran for 299050 frames Cell Events: 7821 mean_circ: 0.948955
Ran for 299550 frames Cell Events: 7841 mean_circ: 0.94897
Ran for 300050 frames Cell Events: 7858 mean_circ: 0.948995
Ran for 300550 frames Cell Events: 7879 mean_circ: 0.94895
Ran for 301050 frames Cell Events: 7888 mean_circ: 0.948959
Ran for 301550 frames Cell Events: 7901 mean_circ: 0.948952
Ran for 302050 frames Cell Events: 7915 mean_circ: 0.948931
Ran for 302550 frames Cell Events: 7927 mean_circ: 0.94892
Ran for 303050 frames Cell Events: 7943 mean_circ: 0.948884
Ran for 304050 frames Cell Events: 7966 mean_circ: 0.94889
Ran for 304550 frames Cell Events: 7976 mean_circ: 0.94891
Ran for 305050 frames Cell Events: 7985 mean_circ: 0.948912
Ran for 305550 frames Cell Events: 7995 mean_circ: 0.948891
Ran for 306050 frames Cell Events: 8004 mean_circ: 0.948878
Ran for 306550 frames Cell Events: 8010 mean_circ: 0.948885
Ran for 307050 frames Cell Events: 8025 mean_circ: 0.948827
Ran for 307550 frames Cell Events: 8039 mean_circ: 0.948826
Ran for 308050 frames Cell Events: 8057 mean_circ: 0.948856
Ran for 308550 frames Cell Events: 8066 mean_circ: 0.948849
Ran for 309050 frames Cell Events: 8078 mean_circ: 0.948863
Ran for 309550 frames Cell Events: 8088 mean_circ: 0.948885
Ran for 310050 frames Cell Events: 8094 mean_circ: 0.948836
Ran for 310550 frames Cell Events: 8106 mean_circ: 0.948826
Ran for 311050 frames Cell Events: 8120 mean_circ: 0.948821
Ran for 311550 frames Cell Events: 8131 mean_circ: 0.948825
End this measurment..
Stopping time: 2.10773e+008
****************************************
Measurement finished
Mean Circularitiy: 0.948807
Mean Area: 568.263
Mean FL-1 intensity: 3156.91
Mean FL-2 intensity: 4085.26
Mean FL-3 intensity: 0
frames processed: 312279
Total Time: 156273ms
Number of Runs (new bg img) 0
Frames collected: 312439
Skipped frames: 3028
Rescued Frames: 601740
Samples DAQ: 78109692
Samples written: 156219038
Samples per Channel: 78109519
FPS: 1999.32
Samples per second: 499828
Expected samples/s: 500000
Events: 8146
Events per second: 52.1268
jumped back (PMT): 6624
#Frames read, frequency
# 0 frames :421502
# 1 frames :181962
# 2 frames :6901
# 3 frames :2181
# 4 frames :1410
# 5 frames :555
# 6 frames :1095
# 7 frames :2363
# 8 frames :1257
# 9 frames :970
# 10 frames :1781
# 11 frames :700
# 12 frames :564
# 13 frames :321
# 14 frames :229
# 15 frames :201
# 16 frames :195
# 17 frames :164
# 18 frames :129
# 19 frames :83
# 20 frames :75
# 21 frames :47
# 22 frames :39
# 23 frames :31
# 24 frames :23
# 25 frames :15
# 26 frames :12
# 27 frames :10
# 28 frames :6
# 29 frames :9
# 30 frames :11
# 31 frames :6
# 32 frames :3
# 33 frames :3
# 34 frames :1
# 36 frames :3
# 37 frames :2
# 39 frames :2
# 42 frames :1
# 44 frames :1
# 45 frames :1
# 49 frames :1
# 51 frames :1
# 53 frames :1
# 56 frames :1
M1_para.ini
[General]
Measurement Number = 1
Flow Rate [ul/s] = 0.04
Region = "Channel"
Channel width = 20
Current LED = 100
[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 6
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0
#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 24.9457
parameters.txt
#fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 6
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 300
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0