Click on the log titles below to expand the log entries present in this DC resource.
dclab-export_2024-07-10_13.58.59
{"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc
{
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "da555b79a111704d7e82dbf2c4ffd914",
"name": "M1_20170606_1902_dsRNA_P1_col.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "11:59:19"
}
}
FG_Config.mcf
[Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;
[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;
[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini
[Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6
[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini
[EVENT LOG] fRT-DC V1.06170206
Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 25.1588
Start pulse train for BG Aquisition..
Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 1.93916e+009
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 50 frames Cell Events: 0 mean_circ: 0.939371
Ran for 1050 frames Cell Events: 34 mean_circ: 0.948634
Ran for 1550 frames Cell Events: 52 mean_circ: 0.950648
Ran for 2050 frames Cell Events: 62 mean_circ: 0.948712
Ran for 2550 frames Cell Events: 78 mean_circ: 0.94547
Ran for 3050 frames Cell Events: 102 mean_circ: 0.946235
Ran for 3550 frames Cell Events: 124 mean_circ: 0.947538
Ran for 4050 frames Cell Events: 138 mean_circ: 0.948584
Ran for 6050 frames Cell Events: 196 mean_circ: 0.950118
Ran for 7050 frames Cell Events: 233 mean_circ: 0.949791
Ran for 7550 frames Cell Events: 243 mean_circ: 0.949954
Ran for 8050 frames Cell Events: 256 mean_circ: 0.950393
Ran for 8550 frames Cell Events: 273 mean_circ: 0.950353
Ran for 9050 frames Cell Events: 292 mean_circ: 0.949494
Ran for 9550 frames Cell Events: 313 mean_circ: 0.949305
Ran for 10050 frames Cell Events: 321 mean_circ: 0.949094
Ran for 11050 frames Cell Events: 357 mean_circ: 0.950459
Ran for 11550 frames Cell Events: 378 mean_circ: 0.951266
Ran for 12050 frames Cell Events: 398 mean_circ: 0.951201
Ran for 12550 frames Cell Events: 425 mean_circ: 0.951051
Ran for 13050 frames Cell Events: 437 mean_circ: 0.950792
Ran for 15550 frames Cell Events: 514 mean_circ: 0.950433
Ran for 16050 frames Cell Events: 524 mean_circ: 0.950753
Ran for 16550 frames Cell Events: 536 mean_circ: 0.950872
Ran for 17050 frames Cell Events: 557 mean_circ: 0.951261
Ran for 17550 frames Cell Events: 585 mean_circ: 0.951516
Ran for 18050 frames Cell Events: 606 mean_circ: 0.951471
Ran for 18550 frames Cell Events: 622 mean_circ: 0.951617
Ran for 19050 frames Cell Events: 630 mean_circ: 0.951566
Ran for 19550 frames Cell Events: 643 mean_circ: 0.950808
Ran for 20050 frames Cell Events: 660 mean_circ: 0.950703
Ran for 21050 frames Cell Events: 691 mean_circ: 0.950998
Ran for 22550 frames Cell Events: 723 mean_circ: 0.950646
Ran for 23050 frames Cell Events: 751 mean_circ: 0.950411
Ran for 23550 frames Cell Events: 763 mean_circ: 0.950542
Ran for 24050 frames Cell Events: 780 mean_circ: 0.950622
Ran for 25050 frames Cell Events: 803 mean_circ: 0.950813
Ran for 25550 frames Cell Events: 815 mean_circ: 0.950893
Ran for 26550 frames Cell Events: 857 mean_circ: 0.950814
Ran for 27550 frames Cell Events: 890 mean_circ: 0.951077
Ran for 28050 frames Cell Events: 906 mean_circ: 0.951145
Ran for 28550 frames Cell Events: 912 mean_circ: 0.951148
Ran for 29050 frames Cell Events: 932 mean_circ: 0.951188
Ran for 30050 frames Cell Events: 961 mean_circ: 0.951436
Ran for 30550 frames Cell Events: 973 mean_circ: 0.951387
Ran for 31050 frames Cell Events: 986 mean_circ: 0.951542
Ran for 31550 frames Cell Events: 997 mean_circ: 0.951532
Ran for 32050 frames Cell Events: 1010 mean_circ: 0.951399
Ran for 32550 frames Cell Events: 1029 mean_circ: 0.951531
Ran for 33050 frames Cell Events: 1043 mean_circ: 0.951654
Ran for 33550 frames Cell Events: 1056 mean_circ: 0.9514
Ran for 34050 frames Cell Events: 1076 mean_circ: 0.951336
Ran for 34550 frames Cell Events: 1097 mean_circ: 0.951367
Ran for 35050 frames Cell Events: 1113 mean_circ: 0.951328
Ran for 35550 frames Cell Events: 1128 mean_circ: 0.951455
Ran for 36050 frames Cell Events: 1151 mean_circ: 0.95155
Ran for 36550 frames Cell Events: 1156 mean_circ: 0.951537
Ran for 37550 frames Cell Events: 1188 mean_circ: 0.951476
Ran for 38050 frames Cell Events: 1197 mean_circ: 0.951466
Ran for 38550 frames Cell Events: 1215 mean_circ: 0.951405
Ran for 39050 frames Cell Events: 1239 mean_circ: 0.951369
Ran for 39550 frames Cell Events: 1255 mean_circ: 0.951304
Ran for 40550 frames Cell Events: 1284 mean_circ: 0.951564
Ran for 41050 frames Cell Events: 1297 mean_circ: 0.951711
Ran for 42050 frames Cell Events: 1332 mean_circ: 0.951716
Ran for 42550 frames Cell Events: 1348 mean_circ: 0.951817
Ran for 43550 frames Cell Events: 1384 mean_circ: 0.951738
Ran for 44050 frames Cell Events: 1405 mean_circ: 0.951795
Ran for 44550 frames Cell Events: 1428 mean_circ: 0.951702
Ran for 45050 frames Cell Events: 1442 mean_circ: 0.951655
Ran for 45550 frames Cell Events: 1452 mean_circ: 0.951707
Ran for 46050 frames Cell Events: 1476 mean_circ: 0.951671
Ran for 46550 frames Cell Events: 1490 mean_circ: 0.951508
Ran for 47050 frames Cell Events: 1497 mean_circ: 0.951459
Ran for 49050 frames Cell Events: 1570 mean_circ: 0.951558
Ran for 49550 frames Cell Events: 1579 mean_circ: 0.951635
Ran for 50050 frames Cell Events: 1588 mean_circ: 0.951681
Ran for 50550 frames Cell Events: 1604 mean_circ: 0.951689
Ran for 51050 frames Cell Events: 1625 mean_circ: 0.951668
Ran for 51550 frames Cell Events: 1639 mean_circ: 0.951598
Ran for 52550 frames Cell Events: 1668 mean_circ: 0.951564
Ran for 53050 frames Cell Events: 1693 mean_circ: 0.951495
Ran for 54050 frames Cell Events: 1713 mean_circ: 0.951417
Ran for 55050 frames Cell Events: 1748 mean_circ: 0.951615
Ran for 55550 frames Cell Events: 1755 mean_circ: 0.951616
Ran for 56050 frames Cell Events: 1762 mean_circ: 0.951635
Ran for 56550 frames Cell Events: 1780 mean_circ: 0.951645
Ran for 57050 frames Cell Events: 1794 mean_circ: 0.951554
Ran for 58050 frames Cell Events: 1824 mean_circ: 0.951519
Ran for 59050 frames Cell Events: 1850 mean_circ: 0.951682
Ran for 59550 frames Cell Events: 1858 mean_circ: 0.951695
Ran for 60050 frames Cell Events: 1874 mean_circ: 0.951704
Ran for 60550 frames Cell Events: 1892 mean_circ: 0.95172
Ran for 61050 frames Cell Events: 1911 mean_circ: 0.951719
Ran for 61550 frames Cell Events: 1923 mean_circ: 0.951733
Ran for 62050 frames Cell Events: 1934 mean_circ: 0.95177
Ran for 62550 frames Cell Events: 1948 mean_circ: 0.951698
Ran for 64050 frames Cell Events: 2004 mean_circ: 0.951534
Ran for 64550 frames Cell Events: 2021 mean_circ: 0.951485
Ran for 65050 frames Cell Events: 2027 mean_circ: 0.951422
Ran for 65550 frames Cell Events: 2037 mean_circ: 0.951408
Ran for 66050 frames Cell Events: 2066 mean_circ: 0.951381
Ran for 67050 frames Cell Events: 2101 mean_circ: 0.9514
Ran for 68550 frames Cell Events: 2158 mean_circ: 0.951457
Ran for 69050 frames Cell Events: 2168 mean_circ: 0.951393
Ran for 69550 frames Cell Events: 2189 mean_circ: 0.951281
Ran for 70050 frames Cell Events: 2200 mean_circ: 0.951139
Ran for 70550 frames Cell Events: 2215 mean_circ: 0.951135
Ran for 71550 frames Cell Events: 2267 mean_circ: 0.950957
Ran for 72550 frames Cell Events: 2298 mean_circ: 0.950862
Ran for 73050 frames Cell Events: 2313 mean_circ: 0.95088
Ran for 74550 frames Cell Events: 2376 mean_circ: 0.950909
Ran for 75550 frames Cell Events: 2406 mean_circ: 0.951033
Ran for 76050 frames Cell Events: 2423 mean_circ: 0.951005
Ran for 76550 frames Cell Events: 2436 mean_circ: 0.950942
Ran for 77050 frames Cell Events: 2455 mean_circ: 0.950935
Ran for 78050 frames Cell Events: 2487 mean_circ: 0.950869
Ran for 78550 frames Cell Events: 2501 mean_circ: 0.950828
Ran for 79050 frames Cell Events: 2514 mean_circ: 0.950794
Ran for 79550 frames Cell Events: 2532 mean_circ: 0.950879
Ran for 80050 frames Cell Events: 2548 mean_circ: 0.950927
Ran for 80550 frames Cell Events: 2565 mean_circ: 0.950917
Ran for 81050 frames Cell Events: 2578 mean_circ: 0.950869
Ran for 81550 frames Cell Events: 2591 mean_circ: 0.950849
Ran for 82050 frames Cell Events: 2604 mean_circ: 0.950843
Ran for 82550 frames Cell Events: 2618 mean_circ: 0.950719
Ran for 83050 frames Cell Events: 2639 mean_circ: 0.950705
Ran for 84550 frames Cell Events: 2691 mean_circ: 0.950638
Ran for 85050 frames Cell Events: 2704 mean_circ: 0.950646
Ran for 85550 frames Cell Events: 2711 mean_circ: 0.950631
Ran for 86050 frames Cell Events: 2728 mean_circ: 0.950647
Ran for 86550 frames Cell Events: 2737 mean_circ: 0.950546
Ran for 87050 frames Cell Events: 2755 mean_circ: 0.950508
Ran for 87550 frames Cell Events: 2771 mean_circ: 0.950389
Ran for 88050 frames Cell Events: 2789 mean_circ: 0.950472
Ran for 89050 frames Cell Events: 2815 mean_circ: 0.950457
Ran for 89550 frames Cell Events: 2836 mean_circ: 0.950543
Ran for 90050 frames Cell Events: 2855 mean_circ: 0.950551
Ran for 91050 frames Cell Events: 2888 mean_circ: 0.950418
Ran for 91550 frames Cell Events: 2896 mean_circ: 0.950415
Ran for 92550 frames Cell Events: 2923 mean_circ: 0.950445
Ran for 93050 frames Cell Events: 2945 mean_circ: 0.950455
Ran for 93550 frames Cell Events: 2963 mean_circ: 0.950434
Ran for 94550 frames Cell Events: 2993 mean_circ: 0.950416
Ran for 95050 frames Cell Events: 3011 mean_circ: 0.950366
Ran for 95550 frames Cell Events: 3022 mean_circ: 0.950371
Ran for 96050 frames Cell Events: 3036 mean_circ: 0.950264
Ran for 96550 frames Cell Events: 3055 mean_circ: 0.950268
Ran for 98550 frames Cell Events: 3114 mean_circ: 0.950262
Ran for 99550 frames Cell Events: 3153 mean_circ: 0.950305
Ran for 100550 frames Cell Events: 3197 mean_circ: 0.950199
Ran for 101050 frames Cell Events: 3211 mean_circ: 0.950126
Ran for 101550 frames Cell Events: 3224 mean_circ: 0.950126
Ran for 102050 frames Cell Events: 3247 mean_circ: 0.950121
Ran for 102550 frames Cell Events: 3262 mean_circ: 0.950206
Ran for 103550 frames Cell Events: 3286 mean_circ: 0.950205
Ran for 104050 frames Cell Events: 3302 mean_circ: 0.950209
Ran for 104550 frames Cell Events: 3313 mean_circ: 0.950217
Ran for 105050 frames Cell Events: 3331 mean_circ: 0.950202
Ran for 105550 frames Cell Events: 3349 mean_circ: 0.950205
Ran for 106050 frames Cell Events: 3373 mean_circ: 0.950212
Ran for 106550 frames Cell Events: 3388 mean_circ: 0.950139
Ran for 107050 frames Cell Events: 3402 mean_circ: 0.950107
Ran for 107550 frames Cell Events: 3418 mean_circ: 0.950157
Ran for 108050 frames Cell Events: 3431 mean_circ: 0.950143
Ran for 108550 frames Cell Events: 3455 mean_circ: 0.950139
Ran for 109050 frames Cell Events: 3473 mean_circ: 0.950158
Ran for 110050 frames Cell Events: 3496 mean_circ: 0.950198
Ran for 110550 frames Cell Events: 3510 mean_circ: 0.950252
Ran for 111550 frames Cell Events: 3545 mean_circ: 0.950133
Ran for 112050 frames Cell Events: 3563 mean_circ: 0.950087
Ran for 112550 frames Cell Events: 3574 mean_circ: 0.950126
Ran for 114050 frames Cell Events: 3640 mean_circ: 0.950133
Ran for 115050 frames Cell Events: 3666 mean_circ: 0.950033
Ran for 115550 frames Cell Events: 3694 mean_circ: 0.950089
Ran for 116050 frames Cell Events: 3713 mean_circ: 0.950112
Ran for 116550 frames Cell Events: 3734 mean_circ: 0.950154
Ran for 117550 frames Cell Events: 3776 mean_circ: 0.949988
Ran for 118050 frames Cell Events: 3809 mean_circ: 0.949967
Ran for 118550 frames Cell Events: 3826 mean_circ: 0.949993
Ran for 119050 frames Cell Events: 3839 mean_circ: 0.949998
Ran for 119550 frames Cell Events: 3848 mean_circ: 0.950033
Ran for 120550 frames Cell Events: 3875 mean_circ: 0.95001
Ran for 121050 frames Cell Events: 3890 mean_circ: 0.950025
Ran for 121550 frames Cell Events: 3898 mean_circ: 0.950004
Ran for 122550 frames Cell Events: 3921 mean_circ: 0.950021
Ran for 123050 frames Cell Events: 3932 mean_circ: 0.949991
Ran for 123550 frames Cell Events: 3953 mean_circ: 0.94998
Ran for 124050 frames Cell Events: 3975 mean_circ: 0.950036
Ran for 124550 frames Cell Events: 3986 mean_circ: 0.950064
Ran for 125050 frames Cell Events: 4004 mean_circ: 0.950111
Ran for 125550 frames Cell Events: 4016 mean_circ: 0.950135
Ran for 126550 frames Cell Events: 4044 mean_circ: 0.950146
Ran for 127550 frames Cell Events: 4079 mean_circ: 0.950175
Ran for 128550 frames Cell Events: 4113 mean_circ: 0.950178
Ran for 129550 frames Cell Events: 4145 mean_circ: 0.950113
Ran for 130050 frames Cell Events: 4166 mean_circ: 0.950075
Ran for 130550 frames Cell Events: 4179 mean_circ: 0.950082
Ran for 131050 frames Cell Events: 4200 mean_circ: 0.950115
Ran for 132050 frames Cell Events: 4238 mean_circ: 0.95015
Ran for 132550 frames Cell Events: 4255 mean_circ: 0.950163
Ran for 134550 frames Cell Events: 4321 mean_circ: 0.95021
Ran for 135050 frames Cell Events: 4339 mean_circ: 0.950218
Ran for 135550 frames Cell Events: 4361 mean_circ: 0.950146
Ran for 136050 frames Cell Events: 4372 mean_circ: 0.950195
Ran for 136550 frames Cell Events: 4393 mean_circ: 0.950256
Ran for 137050 frames Cell Events: 4413 mean_circ: 0.950227
Ran for 137550 frames Cell Events: 4424 mean_circ: 0.950198
Ran for 138550 frames Cell Events: 4456 mean_circ: 0.950175
Ran for 139050 frames Cell Events: 4474 mean_circ: 0.950139
Ran for 139550 frames Cell Events: 4493 mean_circ: 0.950107
Ran for 140050 frames Cell Events: 4512 mean_circ: 0.950108
Ran for 140550 frames Cell Events: 4528 mean_circ: 0.950045
Ran for 141050 frames Cell Events: 4542 mean_circ: 0.950084
Ran for 142050 frames Cell Events: 4581 mean_circ: 0.950071
Ran for 142550 frames Cell Events: 4594 mean_circ: 0.950087
Ran for 143050 frames Cell Events: 4609 mean_circ: 0.95007
Ran for 143550 frames Cell Events: 4623 mean_circ: 0.950102
Ran for 144050 frames Cell Events: 4636 mean_circ: 0.950131
Ran for 144550 frames Cell Events: 4653 mean_circ: 0.950122
Ran for 145050 frames Cell Events: 4663 mean_circ: 0.950145
Ran for 145550 frames Cell Events: 4674 mean_circ: 0.950151
Ran for 146050 frames Cell Events: 4683 mean_circ: 0.950163
Ran for 146550 frames Cell Events: 4700 mean_circ: 0.950165
Ran for 147050 frames Cell Events: 4716 mean_circ: 0.950123
Ran for 147550 frames Cell Events: 4735 mean_circ: 0.950127
Ran for 148050 frames Cell Events: 4756 mean_circ: 0.95017
Ran for 148550 frames Cell Events: 4772 mean_circ: 0.950162
Ran for 149050 frames Cell Events: 4795 mean_circ: 0.950131
Ran for 149550 frames Cell Events: 4816 mean_circ: 0.950079
Ran for 151050 frames Cell Events: 4866 mean_circ: 0.95008
Ran for 151550 frames Cell Events: 4880 mean_circ: 0.950058
Ran for 153050 frames Cell Events: 4942 mean_circ: 0.950051
Ran for 153550 frames Cell Events: 4959 mean_circ: 0.9501
Ran for 154050 frames Cell Events: 4966 mean_circ: 0.950122
Ran for 154550 frames Cell Events: 4986 mean_circ: 0.950097
Ran for 155050 frames Cell Events: 5007 mean_circ: 0.950079
Ran for 155550 frames Cell Events: 5027 mean_circ: 0.950145
Ran for 157050 frames Cell Events: 5076 mean_circ: 0.950201
Ran for 157550 frames Cell Events: 5086 mean_circ: 0.950211
Ran for 159050 frames Cell Events: 5129 mean_circ: 0.950186
Ran for 159550 frames Cell Events: 5141 mean_circ: 0.950196
Ran for 160050 frames Cell Events: 5151 mean_circ: 0.950208
Ran for 160550 frames Cell Events: 5170 mean_circ: 0.950193
Ran for 161550 frames Cell Events: 5201 mean_circ: 0.950212
Ran for 162050 frames Cell Events: 5215 mean_circ: 0.950209
Ran for 162550 frames Cell Events: 5242 mean_circ: 0.950171
Ran for 163050 frames Cell Events: 5258 mean_circ: 0.950169
Ran for 163550 frames Cell Events: 5275 mean_circ: 0.950162
Ran for 164050 frames Cell Events: 5302 mean_circ: 0.950198
Ran for 164550 frames Cell Events: 5314 mean_circ: 0.950186
Ran for 165050 frames Cell Events: 5332 mean_circ: 0.950218
Ran for 166550 frames Cell Events: 5379 mean_circ: 0.950167
Ran for 167050 frames Cell Events: 5401 mean_circ: 0.95016
Ran for 167550 frames Cell Events: 5414 mean_circ: 0.950187
Ran for 168050 frames Cell Events: 5426 mean_circ: 0.950217
Ran for 168550 frames Cell Events: 5439 mean_circ: 0.950246
Ran for 169050 frames Cell Events: 5451 mean_circ: 0.950248
Ran for 171550 frames Cell Events: 5521 mean_circ: 0.950275
Ran for 172050 frames Cell Events: 5529 mean_circ: 0.950267
Ran for 172550 frames Cell Events: 5545 mean_circ: 0.950226
Ran for 173050 frames Cell Events: 5555 mean_circ: 0.950238
Ran for 173550 frames Cell Events: 5582 mean_circ: 0.950229
Ran for 174050 frames Cell Events: 5590 mean_circ: 0.950192
Ran for 174550 frames Cell Events: 5611 mean_circ: 0.950195
Ran for 175050 frames Cell Events: 5629 mean_circ: 0.95021
Ran for 175550 frames Cell Events: 5650 mean_circ: 0.950252
Ran for 176550 frames Cell Events: 5685 mean_circ: 0.950268
Ran for 177050 frames Cell Events: 5702 mean_circ: 0.950273
Ran for 177550 frames Cell Events: 5718 mean_circ: 0.950246
Ran for 178050 frames Cell Events: 5738 mean_circ: 0.950244
Ran for 178550 frames Cell Events: 5760 mean_circ: 0.950235
Ran for 179050 frames Cell Events: 5780 mean_circ: 0.950244
Ran for 179550 frames Cell Events: 5800 mean_circ: 0.950233
Ran for 180050 frames Cell Events: 5817 mean_circ: 0.950259
Ran for 180550 frames Cell Events: 5842 mean_circ: 0.950296
Ran for 181050 frames Cell Events: 5859 mean_circ: 0.950313
Ran for 181550 frames Cell Events: 5866 mean_circ: 0.950318
Ran for 182050 frames Cell Events: 5878 mean_circ: 0.950314
Ran for 182550 frames Cell Events: 5899 mean_circ: 0.950333
Ran for 183050 frames Cell Events: 5918 mean_circ: 0.950359
Ran for 183550 frames Cell Events: 5942 mean_circ: 0.950363
Ran for 184550 frames Cell Events: 5989 mean_circ: 0.950398
Ran for 186550 frames Cell Events: 6060 mean_circ: 0.95036
Ran for 187050 frames Cell Events: 6074 mean_circ: 0.950389
Ran for 188050 frames Cell Events: 6098 mean_circ: 0.950403
Ran for 188550 frames Cell Events: 6116 mean_circ: 0.95044
Ran for 189050 frames Cell Events: 6131 mean_circ: 0.950384
Ran for 189550 frames Cell Events: 6151 mean_circ: 0.950366
Ran for 190050 frames Cell Events: 6167 mean_circ: 0.950386
Ran for 190550 frames Cell Events: 6182 mean_circ: 0.95039
Ran for 191050 frames Cell Events: 6206 mean_circ: 0.950377
Ran for 191550 frames Cell Events: 6221 mean_circ: 0.950366
Ran for 193050 frames Cell Events: 6276 mean_circ: 0.950377
Ran for 194050 frames Cell Events: 6300 mean_circ: 0.950376
Ran for 195050 frames Cell Events: 6330 mean_circ: 0.950391
Ran for 195550 frames Cell Events: 6348 mean_circ: 0.950365
Ran for 196050 frames Cell Events: 6366 mean_circ: 0.950368
Ran for 197050 frames Cell Events: 6406 mean_circ: 0.95039
Ran for 199550 frames Cell Events: 6503 mean_circ: 0.950381
Ran for 200550 frames Cell Events: 6548 mean_circ: 0.9504
Ran for 202050 frames Cell Events: 6591 mean_circ: 0.950417
Ran for 202550 frames Cell Events: 6600 mean_circ: 0.950432
Ran for 204050 frames Cell Events: 6647 mean_circ: 0.950492
Ran for 204550 frames Cell Events: 6659 mean_circ: 0.950484
Ran for 205050 frames Cell Events: 6671 mean_circ: 0.950478
Ran for 205550 frames Cell Events: 6677 mean_circ: 0.950482
Ran for 206050 frames Cell Events: 6695 mean_circ: 0.950489
Ran for 207550 frames Cell Events: 6737 mean_circ: 0.95047
Ran for 208050 frames Cell Events: 6748 mean_circ: 0.950424
Ran for 209050 frames Cell Events: 6779 mean_circ: 0.950476
Ran for 209550 frames Cell Events: 6792 mean_circ: 0.950462
Ran for 210050 frames Cell Events: 6817 mean_circ: 0.950467
Ran for 210550 frames Cell Events: 6836 mean_circ: 0.950461
Ran for 211550 frames Cell Events: 6868 mean_circ: 0.950407
Ran for 212050 frames Cell Events: 6878 mean_circ: 0.95038
Ran for 212550 frames Cell Events: 6894 mean_circ: 0.950394
Ran for 213050 frames Cell Events: 6915 mean_circ: 0.950389
Ran for 213550 frames Cell Events: 6926 mean_circ: 0.950404
Ran for 214050 frames Cell Events: 6941 mean_circ: 0.9504
Ran for 214550 frames Cell Events: 6958 mean_circ: 0.950343
Ran for 215050 frames Cell Events: 6972 mean_circ: 0.950359
Ran for 215550 frames Cell Events: 7001 mean_circ: 0.950322
Ran for 216050 frames Cell Events: 7023 mean_circ: 0.950329
Ran for 216550 frames Cell Events: 7039 mean_circ: 0.950336
Ran for 217050 frames Cell Events: 7053 mean_circ: 0.950367
Ran for 217550 frames Cell Events: 7067 mean_circ: 0.950327
Ran for 218050 frames Cell Events: 7088 mean_circ: 0.950318
Ran for 218550 frames Cell Events: 7108 mean_circ: 0.950338
Ran for 219050 frames Cell Events: 7124 mean_circ: 0.950388
Ran for 220550 frames Cell Events: 7174 mean_circ: 0.950363
Ran for 221050 frames Cell Events: 7199 mean_circ: 0.950342
Ran for 221550 frames Cell Events: 7221 mean_circ: 0.950297
Ran for 222550 frames Cell Events: 7266 mean_circ: 0.950309
Ran for 223550 frames Cell Events: 7308 mean_circ: 0.950248
Ran for 224050 frames Cell Events: 7331 mean_circ: 0.950203
Ran for 224550 frames Cell Events: 7347 mean_circ: 0.95018
Ran for 225050 frames Cell Events: 7368 mean_circ: 0.950178
Ran for 225550 frames Cell Events: 7387 mean_circ: 0.950198
Ran for 226050 frames Cell Events: 7404 mean_circ: 0.950163
Ran for 227050 frames Cell Events: 7432 mean_circ: 0.9501
Ran for 227550 frames Cell Events: 7454 mean_circ: 0.950061
Ran for 228550 frames Cell Events: 7497 mean_circ: 0.950018
Ran for 229050 frames Cell Events: 7511 mean_circ: 0.950035
Ran for 231050 frames Cell Events: 7604 mean_circ: 0.950043
Ran for 232050 frames Cell Events: 7637 mean_circ: 0.950066
Ran for 232550 frames Cell Events: 7657 mean_circ: 0.950074
Ran for 233550 frames Cell Events: 7699 mean_circ: 0.950115
Ran for 235550 frames Cell Events: 7773 mean_circ: 0.950041
Ran for 236550 frames Cell Events: 7820 mean_circ: 0.950036
Ran for 237050 frames Cell Events: 7837 mean_circ: 0.950076
Ran for 237550 frames Cell Events: 7857 mean_circ: 0.950088
Ran for 238550 frames Cell Events: 7896 mean_circ: 0.950127
Ran for 239550 frames Cell Events: 7937 mean_circ: 0.950083
Ran for 240050 frames Cell Events: 7961 mean_circ: 0.950076
Ran for 241050 frames Cell Events: 7999 mean_circ: 0.950042
Ran for 241550 frames Cell Events: 8014 mean_circ: 0.950055
Ran for 242050 frames Cell Events: 8041 mean_circ: 0.950067
End this measurment..
Stopping time: 1.93928e+009
****************************************
Measurement finished
Mean Circularitiy: 0.950033
Mean Area: 627.085
Mean FL-1 intensity: 4054.69
Mean FL-2 intensity: 4898.28
Mean FL-3 intensity: 0
frames processed: 240957
Total Time: 121181ms
Number of Runs (new bg img) 0
Frames collected: 242200
Skipped frames: 121456
Rescued Frames: 2474233
Samples DAQ: 60550273
Samples written: 121099778
Samples per Channel: 60549889
FPS: 1998.66
Samples per second: 499664
Expected samples/s: 500000
Events: 8048
Events per second: 66.413
jumped back (PMT): 5218
#Frames read, frequency
# 0 frames :325363
# 1 frames :142158
# 2 frames :4691
# 3 frames :1472
# 4 frames :861
# 5 frames :2439
# 6 frames :2123
# 7 frames :1462
# 8 frames :731
# 9 frames :476
# 10 frames :558
# 11 frames :408
# 12 frames :339
# 13 frames :266
# 14 frames :178
# 15 frames :125
# 16 frames :138
# 17 frames :99
# 18 frames :102
# 19 frames :75
# 20 frames :57
# 21 frames :63
# 22 frames :48
# 23 frames :25
# 24 frames :22
# 25 frames :16
# 26 frames :18
# 27 frames :9
# 28 frames :12
# 29 frames :10
# 30 frames :4
# 31 frames :7
# 32 frames :2
# 33 frames :4
# 34 frames :2
# 35 frames :2
# 37 frames :1
# 38 frames :1
# 40 frames :1
# 62 frames :1
M1_para.ini
[General]
Measurement Number = 1
Flow Rate [ul/s] = 0.04
Region = "Channel"
Channel width = 20
Current LED = 100
[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 6
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0
#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 25.1588
parameters.txt
#fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 6
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 300
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0