Click on the log titles below to expand the log entries present in this DC resource.
dclab-export_2024-07-10_14.01.41
{"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc
{
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "bcb570610558962af82d2f9964d6ebec",
"name": "M1_20170606_1944_dsRNA_P4_col.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "12:02:02"
}
}
dclab-tdms2rtdc-warnings
LimitingExportSizeWarning
in dclab.rtdc_dataset.export line 305:
Not all features have the same length! Limiting output event count to 8724 (max 8725) in '8724'.
FG_Config.mcf
[Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;
[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;
[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini
[Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6
[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini
[EVENT LOG] fRT-DC V1.06170206
Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 25.2315
Start pulse train for BG Aquisition..
Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 1.94168e+009
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 550 frames Cell Events: 8 mean_circ: 0.934123
Ran for 1050 frames Cell Events: 12 mean_circ: 0.929782
Ran for 1550 frames Cell Events: 19 mean_circ: 0.925786
Ran for 3050 frames Cell Events: 52 mean_circ: 0.931387
Ran for 3550 frames Cell Events: 57 mean_circ: 0.926484
Ran for 4050 frames Cell Events: 59 mean_circ: 0.927202
Ran for 5050 frames Cell Events: 75 mean_circ: 0.932076
Ran for 6050 frames Cell Events: 92 mean_circ: 0.933286
Ran for 8050 frames Cell Events: 122 mean_circ: 0.935315
Ran for 8550 frames Cell Events: 129 mean_circ: 0.934995
Ran for 9050 frames Cell Events: 135 mean_circ: 0.935194
Ran for 9550 frames Cell Events: 145 mean_circ: 0.935242
Ran for 11050 frames Cell Events: 172 mean_circ: 0.936268
Ran for 11550 frames Cell Events: 178 mean_circ: 0.936097
Ran for 12550 frames Cell Events: 200 mean_circ: 0.935795
Ran for 13050 frames Cell Events: 214 mean_circ: 0.936565
Ran for 13550 frames Cell Events: 223 mean_circ: 0.937071
Ran for 14050 frames Cell Events: 227 mean_circ: 0.937404
Ran for 14550 frames Cell Events: 235 mean_circ: 0.937172
Ran for 15050 frames Cell Events: 245 mean_circ: 0.937453
Ran for 15550 frames Cell Events: 256 mean_circ: 0.935935
Ran for 16050 frames Cell Events: 262 mean_circ: 0.935366
Ran for 16550 frames Cell Events: 270 mean_circ: 0.934212
Ran for 17050 frames Cell Events: 282 mean_circ: 0.934529
Ran for 17550 frames Cell Events: 290 mean_circ: 0.935105
Ran for 19050 frames Cell Events: 323 mean_circ: 0.935133
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Ran for 20050 frames Cell Events: 345 mean_circ: 0.934902
Ran for 22550 frames Cell Events: 396 mean_circ: 0.935297
Ran for 23050 frames Cell Events: 415 mean_circ: 0.935357
Ran for 23550 frames Cell Events: 428 mean_circ: 0.934523
Ran for 24050 frames Cell Events: 432 mean_circ: 0.934251
Ran for 24550 frames Cell Events: 441 mean_circ: 0.934397
Ran for 25550 frames Cell Events: 443 mean_circ: 0.93433
Ran for 26050 frames Cell Events: 455 mean_circ: 0.934509
Ran for 26550 frames Cell Events: 464 mean_circ: 0.93463
Ran for 27050 frames Cell Events: 480 mean_circ: 0.934908
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Ran for 28550 frames Cell Events: 512 mean_circ: 0.93623
Ran for 29050 frames Cell Events: 525 mean_circ: 0.935583
Ran for 29550 frames Cell Events: 536 mean_circ: 0.935818
Ran for 30050 frames Cell Events: 549 mean_circ: 0.935902
Ran for 30550 frames Cell Events: 557 mean_circ: 0.935934
Ran for 31050 frames Cell Events: 560 mean_circ: 0.93597
Ran for 31550 frames Cell Events: 566 mean_circ: 0.936074
Ran for 32050 frames Cell Events: 572 mean_circ: 0.935897
Ran for 32550 frames Cell Events: 582 mean_circ: 0.935929
Ran for 33050 frames Cell Events: 589 mean_circ: 0.936023
Ran for 33550 frames Cell Events: 599 mean_circ: 0.936171
Ran for 35050 frames Cell Events: 624 mean_circ: 0.936606
Ran for 35550 frames Cell Events: 640 mean_circ: 0.936297
Ran for 36050 frames Cell Events: 650 mean_circ: 0.935862
Ran for 36550 frames Cell Events: 662 mean_circ: 0.935614
Ran for 37550 frames Cell Events: 678 mean_circ: 0.935348
Ran for 38050 frames Cell Events: 683 mean_circ: 0.935489
Ran for 38550 frames Cell Events: 695 mean_circ: 0.93565
Ran for 39050 frames Cell Events: 704 mean_circ: 0.935681
Ran for 39550 frames Cell Events: 713 mean_circ: 0.935735
Ran for 40050 frames Cell Events: 720 mean_circ: 0.936004
Ran for 40550 frames Cell Events: 726 mean_circ: 0.936164
Ran for 41050 frames Cell Events: 733 mean_circ: 0.936147
Ran for 42050 frames Cell Events: 758 mean_circ: 0.935917
Ran for 42550 frames Cell Events: 763 mean_circ: 0.936008
Ran for 43050 frames Cell Events: 776 mean_circ: 0.936058
Ran for 43550 frames Cell Events: 784 mean_circ: 0.93593
Ran for 44050 frames Cell Events: 789 mean_circ: 0.935992
Ran for 44550 frames Cell Events: 800 mean_circ: 0.936174
Ran for 45050 frames Cell Events: 810 mean_circ: 0.936286
Ran for 46550 frames Cell Events: 830 mean_circ: 0.936441
Ran for 48050 frames Cell Events: 851 mean_circ: 0.936093
Ran for 48550 frames Cell Events: 862 mean_circ: 0.935886
Ran for 49050 frames Cell Events: 869 mean_circ: 0.935688
Ran for 49550 frames Cell Events: 874 mean_circ: 0.935396
Ran for 50050 frames Cell Events: 881 mean_circ: 0.935293
Ran for 50550 frames Cell Events: 891 mean_circ: 0.935213
Ran for 51050 frames Cell Events: 898 mean_circ: 0.935258
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Ran for 52050 frames Cell Events: 911 mean_circ: 0.935448
Ran for 52550 frames Cell Events: 921 mean_circ: 0.935535
Ran for 53050 frames Cell Events: 924 mean_circ: 0.935658
Ran for 53550 frames Cell Events: 935 mean_circ: 0.93577
Ran for 54550 frames Cell Events: 948 mean_circ: 0.93609
Ran for 55550 frames Cell Events: 975 mean_circ: 0.936099
Ran for 57550 frames Cell Events: 1007 mean_circ: 0.936363
Ran for 58050 frames Cell Events: 1018 mean_circ: 0.93637
Ran for 59550 frames Cell Events: 1045 mean_circ: 0.936313
Ran for 60050 frames Cell Events: 1055 mean_circ: 0.936318
Ran for 61050 frames Cell Events: 1073 mean_circ: 0.936376
Ran for 61550 frames Cell Events: 1080 mean_circ: 0.936537
Ran for 62550 frames Cell Events: 1108 mean_circ: 0.936792
Ran for 64050 frames Cell Events: 1133 mean_circ: 0.936647
Ran for 64550 frames Cell Events: 1137 mean_circ: 0.936728
Ran for 65550 frames Cell Events: 1157 mean_circ: 0.936592
Ran for 66050 frames Cell Events: 1171 mean_circ: 0.936654
Ran for 66550 frames Cell Events: 1179 mean_circ: 0.936643
Ran for 67050 frames Cell Events: 1184 mean_circ: 0.936648
Ran for 68550 frames Cell Events: 1209 mean_circ: 0.93665
Ran for 69050 frames Cell Events: 1221 mean_circ: 0.936622
Ran for 69550 frames Cell Events: 1228 mean_circ: 0.93673
Ran for 70050 frames Cell Events: 1237 mean_circ: 0.93685
Ran for 70550 frames Cell Events: 1243 mean_circ: 0.936865
Ran for 71550 frames Cell Events: 1252 mean_circ: 0.936801
Ran for 72050 frames Cell Events: 1258 mean_circ: 0.936712
Ran for 72550 frames Cell Events: 1269 mean_circ: 0.936823
Ran for 73550 frames Cell Events: 1282 mean_circ: 0.936887
Ran for 75050 frames Cell Events: 1304 mean_circ: 0.937012
Ran for 75550 frames Cell Events: 1317 mean_circ: 0.937135
Ran for 76050 frames Cell Events: 1325 mean_circ: 0.937195
Ran for 76550 frames Cell Events: 1333 mean_circ: 0.937345
Ran for 77050 frames Cell Events: 1340 mean_circ: 0.937258
Ran for 77550 frames Cell Events: 1347 mean_circ: 0.937323
Ran for 78050 frames Cell Events: 1365 mean_circ: 0.937007
Ran for 78550 frames Cell Events: 1371 mean_circ: 0.93706
Ran for 79050 frames Cell Events: 1377 mean_circ: 0.937067
Ran for 80050 frames Cell Events: 1389 mean_circ: 0.937061
Ran for 80550 frames Cell Events: 1395 mean_circ: 0.937054
Ran for 81050 frames Cell Events: 1400 mean_circ: 0.93712
Ran for 81550 frames Cell Events: 1407 mean_circ: 0.937208
Ran for 82050 frames Cell Events: 1415 mean_circ: 0.937242
Ran for 82550 frames Cell Events: 1422 mean_circ: 0.937177
Ran for 83050 frames Cell Events: 1437 mean_circ: 0.937284
Ran for 84050 frames Cell Events: 1462 mean_circ: 0.937276
Ran for 84550 frames Cell Events: 1467 mean_circ: 0.937389
Ran for 85050 frames Cell Events: 1480 mean_circ: 0.937368
Ran for 86050 frames Cell Events: 1489 mean_circ: 0.937413
Ran for 86550 frames Cell Events: 1497 mean_circ: 0.937455
Ran for 87050 frames Cell Events: 1504 mean_circ: 0.937473
Ran for 87550 frames Cell Events: 1511 mean_circ: 0.937518
Ran for 88050 frames Cell Events: 1516 mean_circ: 0.937381
Ran for 89050 frames Cell Events: 1534 mean_circ: 0.937226
Ran for 89550 frames Cell Events: 1544 mean_circ: 0.937288
Ran for 90050 frames Cell Events: 1554 mean_circ: 0.937203
Ran for 91050 frames Cell Events: 1571 mean_circ: 0.93736
Ran for 92050 frames Cell Events: 1583 mean_circ: 0.937261
Ran for 92550 frames Cell Events: 1589 mean_circ: 0.937171
Ran for 93050 frames Cell Events: 1595 mean_circ: 0.937075
Ran for 93550 frames Cell Events: 1610 mean_circ: 0.937095
Ran for 94050 frames Cell Events: 1620 mean_circ: 0.93699
Ran for 94550 frames Cell Events: 1622 mean_circ: 0.936995
Ran for 95050 frames Cell Events: 1633 mean_circ: 0.9368
Ran for 95550 frames Cell Events: 1639 mean_circ: 0.93684
Ran for 96050 frames Cell Events: 1647 mean_circ: 0.936863
Ran for 96550 frames Cell Events: 1654 mean_circ: 0.936924
Ran for 97050 frames Cell Events: 1659 mean_circ: 0.936891
Ran for 97550 frames Cell Events: 1668 mean_circ: 0.936947
Ran for 98050 frames Cell Events: 1676 mean_circ: 0.93704
Ran for 99050 frames Cell Events: 1695 mean_circ: 0.937145
Ran for 99550 frames Cell Events: 1699 mean_circ: 0.937132
Ran for 100050 frames Cell Events: 1704 mean_circ: 0.937142
Ran for 100550 frames Cell Events: 1715 mean_circ: 0.937188
Ran for 101050 frames Cell Events: 1723 mean_circ: 0.93721
Ran for 102050 frames Cell Events: 1743 mean_circ: 0.937243
Ran for 102550 frames Cell Events: 1753 mean_circ: 0.937175
Ran for 103050 frames Cell Events: 1758 mean_circ: 0.937126
Ran for 104050 frames Cell Events: 1764 mean_circ: 0.93711
Ran for 104550 frames Cell Events: 1770 mean_circ: 0.93712
Ran for 107550 frames Cell Events: 1824 mean_circ: 0.937396
Ran for 109050 frames Cell Events: 1851 mean_circ: 0.937545
Ran for 109550 frames Cell Events: 1859 mean_circ: 0.93754
Ran for 110550 frames Cell Events: 1884 mean_circ: 0.937472
Ran for 111050 frames Cell Events: 1890 mean_circ: 0.937493
Ran for 111550 frames Cell Events: 1901 mean_circ: 0.937562
Ran for 112050 frames Cell Events: 1912 mean_circ: 0.937516
Ran for 112550 frames Cell Events: 1921 mean_circ: 0.937551
Ran for 113050 frames Cell Events: 1925 mean_circ: 0.937509
Ran for 113550 frames Cell Events: 1936 mean_circ: 0.93741
Ran for 115050 frames Cell Events: 1956 mean_circ: 0.937389
Ran for 116550 frames Cell Events: 1975 mean_circ: 0.937516
Ran for 117050 frames Cell Events: 1981 mean_circ: 0.93738
Ran for 117550 frames Cell Events: 1987 mean_circ: 0.937349
Ran for 118050 frames Cell Events: 1991 mean_circ: 0.937361
Ran for 118550 frames Cell Events: 2003 mean_circ: 0.937407
Ran for 119050 frames Cell Events: 2013 mean_circ: 0.937454
Ran for 119550 frames Cell Events: 2022 mean_circ: 0.937417
Ran for 120050 frames Cell Events: 2029 mean_circ: 0.937423
Ran for 120550 frames Cell Events: 2040 mean_circ: 0.937418
Ran for 121050 frames Cell Events: 2045 mean_circ: 0.937392
Ran for 122050 frames Cell Events: 2059 mean_circ: 0.937428
Ran for 122550 frames Cell Events: 2066 mean_circ: 0.937451
Ran for 123050 frames Cell Events: 2076 mean_circ: 0.937475
Ran for 123550 frames Cell Events: 2092 mean_circ: 0.937433
Ran for 124050 frames Cell Events: 2096 mean_circ: 0.937282
Ran for 125050 frames Cell Events: 2113 mean_circ: 0.937287
Ran for 125550 frames Cell Events: 2125 mean_circ: 0.937219
Ran for 126550 frames Cell Events: 2141 mean_circ: 0.937251
Ran for 127050 frames Cell Events: 2147 mean_circ: 0.937244
Ran for 127550 frames Cell Events: 2151 mean_circ: 0.937184
Ran for 128050 frames Cell Events: 2158 mean_circ: 0.93713
Ran for 128550 frames Cell Events: 2174 mean_circ: 0.937037
Ran for 129550 frames Cell Events: 2194 mean_circ: 0.937133
Ran for 130050 frames Cell Events: 2207 mean_circ: 0.937119
Ran for 130550 frames Cell Events: 2215 mean_circ: 0.937004
Ran for 131050 frames Cell Events: 2225 mean_circ: 0.936866
Ran for 131550 frames Cell Events: 2230 mean_circ: 0.936882
Ran for 132050 frames Cell Events: 2246 mean_circ: 0.936959
Ran for 132550 frames Cell Events: 2251 mean_circ: 0.936985
Ran for 133050 frames Cell Events: 2267 mean_circ: 0.936964
Ran for 133550 frames Cell Events: 2272 mean_circ: 0.936975
Ran for 134550 frames Cell Events: 2292 mean_circ: 0.936915
Ran for 136050 frames Cell Events: 2319 mean_circ: 0.936799
Ran for 136550 frames Cell Events: 2330 mean_circ: 0.936693
Ran for 137050 frames Cell Events: 2335 mean_circ: 0.936524
Ran for 138050 frames Cell Events: 2355 mean_circ: 0.936482
Ran for 138550 frames Cell Events: 2359 mean_circ: 0.936445
Ran for 139550 frames Cell Events: 2390 mean_circ: 0.936356
Ran for 140050 frames Cell Events: 2398 mean_circ: 0.936313
Ran for 140550 frames Cell Events: 2404 mean_circ: 0.936317
Ran for 141050 frames Cell Events: 2415 mean_circ: 0.936313
Ran for 141550 frames Cell Events: 2427 mean_circ: 0.936268
Ran for 143050 frames Cell Events: 2459 mean_circ: 0.936224
Ran for 145050 frames Cell Events: 2495 mean_circ: 0.936211
Ran for 146050 frames Cell Events: 2514 mean_circ: 0.936246
Ran for 146550 frames Cell Events: 2526 mean_circ: 0.936196
Ran for 147050 frames Cell Events: 2533 mean_circ: 0.936269
Ran for 147550 frames Cell Events: 2543 mean_circ: 0.936319
Ran for 149550 frames Cell Events: 2578 mean_circ: 0.936258
Ran for 150550 frames Cell Events: 2597 mean_circ: 0.93628
Ran for 151050 frames Cell Events: 2608 mean_circ: 0.936331
Ran for 151550 frames Cell Events: 2613 mean_circ: 0.936303
Ran for 152050 frames Cell Events: 2624 mean_circ: 0.936284
Ran for 152550 frames Cell Events: 2631 mean_circ: 0.936279
Ran for 153050 frames Cell Events: 2639 mean_circ: 0.936272
Ran for 154050 frames Cell Events: 2653 mean_circ: 0.936344
Ran for 154550 frames Cell Events: 2669 mean_circ: 0.936493
Ran for 155050 frames Cell Events: 2686 mean_circ: 0.936441
Ran for 155550 frames Cell Events: 2702 mean_circ: 0.9365
Ran for 156050 frames Cell Events: 2711 mean_circ: 0.936559
Ran for 156550 frames Cell Events: 2719 mean_circ: 0.936463
Ran for 158050 frames Cell Events: 2743 mean_circ: 0.936321
Ran for 160050 frames Cell Events: 2774 mean_circ: 0.936394
Ran for 161050 frames Cell Events: 2793 mean_circ: 0.936385
Ran for 162050 frames Cell Events: 2819 mean_circ: 0.936352
Ran for 162550 frames Cell Events: 2831 mean_circ: 0.936428
Ran for 163050 frames Cell Events: 2844 mean_circ: 0.936477
Ran for 163550 frames Cell Events: 2849 mean_circ: 0.93644
Ran for 164550 frames Cell Events: 2865 mean_circ: 0.936394
Ran for 165550 frames Cell Events: 2882 mean_circ: 0.936405
Ran for 166050 frames Cell Events: 2890 mean_circ: 0.936372
Ran for 166550 frames Cell Events: 2896 mean_circ: 0.936406
Ran for 167050 frames Cell Events: 2900 mean_circ: 0.93643
Ran for 167550 frames Cell Events: 2909 mean_circ: 0.936476
Ran for 168050 frames Cell Events: 2920 mean_circ: 0.936437
Ran for 169550 frames Cell Events: 2947 mean_circ: 0.9363
Ran for 170050 frames Cell Events: 2953 mean_circ: 0.936305
Ran for 170550 frames Cell Events: 2963 mean_circ: 0.936347
Ran for 171050 frames Cell Events: 2978 mean_circ: 0.936393
Ran for 172050 frames Cell Events: 2999 mean_circ: 0.936262
Ran for 172550 frames Cell Events: 3008 mean_circ: 0.9362
Ran for 173050 frames Cell Events: 3017 mean_circ: 0.936202
Ran for 173550 frames Cell Events: 3021 mean_circ: 0.936214
Ran for 174050 frames Cell Events: 3042 mean_circ: 0.936206
Ran for 174550 frames Cell Events: 3056 mean_circ: 0.936213
Ran for 175050 frames Cell Events: 3062 mean_circ: 0.936232
Ran for 175550 frames Cell Events: 3075 mean_circ: 0.936232
Ran for 176550 frames Cell Events: 3091 mean_circ: 0.93624
Ran for 177050 frames Cell Events: 3101 mean_circ: 0.936229
Ran for 177550 frames Cell Events: 3110 mean_circ: 0.936197
Ran for 178050 frames Cell Events: 3122 mean_circ: 0.936143
Ran for 178550 frames Cell Events: 3135 mean_circ: 0.936199
Ran for 180050 frames Cell Events: 3166 mean_circ: 0.936271
Ran for 181050 frames Cell Events: 3184 mean_circ: 0.936322
Ran for 181550 frames Cell Events: 3188 mean_circ: 0.936346
Ran for 182550 frames Cell Events: 3205 mean_circ: 0.936261
Ran for 183050 frames Cell Events: 3214 mean_circ: 0.936245
Ran for 183550 frames Cell Events: 3225 mean_circ: 0.936269
Ran for 184050 frames Cell Events: 3230 mean_circ: 0.936207
Ran for 185050 frames Cell Events: 3253 mean_circ: 0.936184
Ran for 186050 frames Cell Events: 3270 mean_circ: 0.93609
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Ran for 427550 frames Cell Events: 7924 mean_circ: 0.934753
Ran for 428550 frames Cell Events: 7944 mean_circ: 0.934697
Ran for 429050 frames Cell Events: 7949 mean_circ: 0.934725
Ran for 429550 frames Cell Events: 7959 mean_circ: 0.93474
Ran for 431550 frames Cell Events: 7992 mean_circ: 0.934678
Ran for 432050 frames Cell Events: 8004 mean_circ: 0.934682
Ran for 432550 frames Cell Events: 8014 mean_circ: 0.934717
Ran for 433050 frames Cell Events: 8026 mean_circ: 0.934713
Ran for 433550 frames Cell Events: 8036 mean_circ: 0.934718
Ran for 434050 frames Cell Events: 8044 mean_circ: 0.934726
Ran for 434550 frames Cell Events: 8055 mean_circ: 0.934718
Ran for 435050 frames Cell Events: 8065 mean_circ: 0.934731
Ran for 435550 frames Cell Events: 8075 mean_circ: 0.934713
Ran for 436050 frames Cell Events: 8083 mean_circ: 0.934733
Ran for 436550 frames Cell Events: 8092 mean_circ: 0.934752
Ran for 437050 frames Cell Events: 8111 mean_circ: 0.934758
Ran for 438550 frames Cell Events: 8146 mean_circ: 0.934758
Ran for 440550 frames Cell Events: 8181 mean_circ: 0.934735
Ran for 441050 frames Cell Events: 8186 mean_circ: 0.934739
Ran for 442550 frames Cell Events: 8222 mean_circ: 0.934713
Ran for 443050 frames Cell Events: 8230 mean_circ: 0.9347
Ran for 443550 frames Cell Events: 8242 mean_circ: 0.934695
Ran for 444550 frames Cell Events: 8268 mean_circ: 0.934657
Ran for 445050 frames Cell Events: 8281 mean_circ: 0.934662
Ran for 445550 frames Cell Events: 8287 mean_circ: 0.934657
Ran for 446550 frames Cell Events: 8303 mean_circ: 0.934632
Ran for 447050 frames Cell Events: 8314 mean_circ: 0.934631
Ran for 448050 frames Cell Events: 8331 mean_circ: 0.934668
Ran for 449050 frames Cell Events: 8347 mean_circ: 0.934681
Ran for 449550 frames Cell Events: 8365 mean_circ: 0.93466
Ran for 450050 frames Cell Events: 8372 mean_circ: 0.934629
Ran for 451050 frames Cell Events: 8386 mean_circ: 0.934603
Ran for 451550 frames Cell Events: 8392 mean_circ: 0.934596
Ran for 452050 frames Cell Events: 8398 mean_circ: 0.934591
Ran for 452550 frames Cell Events: 8412 mean_circ: 0.934601
Ran for 453050 frames Cell Events: 8419 mean_circ: 0.9346
Ran for 453550 frames Cell Events: 8428 mean_circ: 0.934608
Ran for 454050 frames Cell Events: 8438 mean_circ: 0.934598
Ran for 454550 frames Cell Events: 8453 mean_circ: 0.934585
Ran for 455050 frames Cell Events: 8460 mean_circ: 0.934569
Ran for 455550 frames Cell Events: 8472 mean_circ: 0.934561
Ran for 456050 frames Cell Events: 8481 mean_circ: 0.934538
Ran for 456550 frames Cell Events: 8487 mean_circ: 0.934539
Ran for 457050 frames Cell Events: 8506 mean_circ: 0.934523
Ran for 457550 frames Cell Events: 8514 mean_circ: 0.934519
Ran for 458050 frames Cell Events: 8520 mean_circ: 0.934524
Ran for 458550 frames Cell Events: 8532 mean_circ: 0.934474
Ran for 459050 frames Cell Events: 8539 mean_circ: 0.93447
Ran for 459550 frames Cell Events: 8549 mean_circ: 0.934472
Ran for 460550 frames Cell Events: 8570 mean_circ: 0.934464
Ran for 461050 frames Cell Events: 8577 mean_circ: 0.934455
Ran for 461550 frames Cell Events: 8585 mean_circ: 0.934446
Ran for 462550 frames Cell Events: 8601 mean_circ: 0.934426
Ran for 464050 frames Cell Events: 8626 mean_circ: 0.93443
Ran for 465550 frames Cell Events: 8658 mean_circ: 0.934444
Ran for 466050 frames Cell Events: 8664 mean_circ: 0.934429
Ran for 467050 frames Cell Events: 8679 mean_circ: 0.934427
Ran for 467550 frames Cell Events: 8694 mean_circ: 0.934418
Ran for 468050 frames Cell Events: 8703 mean_circ: 0.934419
Ran for 468550 frames Cell Events: 8706 mean_circ: 0.934413
End this measurment..
Stopping time: 1.94192e+009
****************************************
Measurement finished
Mean Circularitiy: 0.934391
Mean Area: 739.556
Mean FL-1 intensity: 4644.66
Mean FL-2 intensity: 5923.22
Mean FL-3 intensity: 0
frames processed: 467324
Total Time: 234878ms
Number of Runs (new bg img) 0
Frames collected: 469533
Skipped frames: 132362
Rescued Frames: 3231209
Samples DAQ: 117385805
Samples written: 234766244
Samples per Channel: 117383122
FPS: 1999.05
Samples per second: 499761
Expected samples/s: 500000
Events: 8725
Events per second: 37.1469
jumped back (PMT): 5354
#Frames read, frequency
# 0 frames :646388
# 1 frames :264013
# 2 frames :6946
# 3 frames :3572
# 4 frames :2405
# 5 frames :1674
# 6 frames :2007
# 7 frames :2047
# 8 frames :1560
# 9 frames :1119
# 10 frames :832
# 11 frames :795
# 12 frames :896
# 13 frames :785
# 14 frames :654
# 15 frames :499
# 16 frames :432
# 17 frames :345
# 18 frames :358
# 19 frames :322
# 20 frames :287
# 21 frames :210
# 22 frames :148
# 23 frames :101
# 24 frames :70
# 25 frames :54
# 26 frames :69
# 27 frames :40
# 28 frames :51
# 29 frames :69
# 30 frames :57
# 31 frames :42
# 32 frames :26
# 33 frames :18
# 34 frames :13
# 35 frames :8
# 36 frames :6
# 37 frames :6
# 38 frames :6
# 39 frames :4
# 40 frames :2
# 41 frames :2
# 42 frames :1
# 43 frames :4
# 44 frames :4
# 47 frames :2
# 49 frames :1
# 50 frames :1
# 59 frames :1
# 62 frames :1
# 67 frames :1
M1_para.ini
[General]
Measurement Number = 1
Flow Rate [ul/s] = 0.04
Region = "Channel"
Channel width = 20
Current LED = 100
[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 6
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0
#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 25.2315
parameters.txt
#fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 6
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 300
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0