Click on the log titles below to expand the log entries present in this DC resource.
dclab-export_2024-07-10_18.38.49
{"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc
{
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "102e1a319d6288865fb0b821efc09b4f",
"name": "M1_20170618_1352_dsRNA_R4_col.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "16:39:10"
}
}
dclab-tdms2rtdc-warnings
LimitingExportSizeWarning
in dclab.rtdc_dataset.export line 305:
Not all features have the same length! Limiting output event count to 8134 (max 8135) in '8134'.
FG_Config.mcf
[Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;
[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;
[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini
[Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6
[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini
[EVENT LOG] fRT-DC V1.06170206
Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 24.7564
Start pulse train for BG Aquisition..
Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 3.84096e+008
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 550 frames Cell Events: 14 mean_circ: 0.927242
Ran for 1050 frames Cell Events: 26 mean_circ: 0.933748
Ran for 1550 frames Cell Events: 37 mean_circ: 0.9384
Ran for 2050 frames Cell Events: 45 mean_circ: 0.941896
Ran for 2550 frames Cell Events: 61 mean_circ: 0.946908
Ran for 3050 frames Cell Events: 72 mean_circ: 0.942424
Ran for 3550 frames Cell Events: 87 mean_circ: 0.94274
Ran for 4050 frames Cell Events: 101 mean_circ: 0.941814
Ran for 4550 frames Cell Events: 110 mean_circ: 0.94289
Ran for 5050 frames Cell Events: 122 mean_circ: 0.943041
Ran for 6050 frames Cell Events: 155 mean_circ: 0.940486
Ran for 6550 frames Cell Events: 172 mean_circ: 0.94009
Ran for 8050 frames Cell Events: 230 mean_circ: 0.938577
Ran for 8550 frames Cell Events: 247 mean_circ: 0.938576
Ran for 9550 frames Cell Events: 283 mean_circ: 0.93875
Ran for 10550 frames Cell Events: 311 mean_circ: 0.938676
Ran for 11050 frames Cell Events: 331 mean_circ: 0.939121
Ran for 12050 frames Cell Events: 364 mean_circ: 0.940041
Ran for 12550 frames Cell Events: 378 mean_circ: 0.940138
Ran for 13050 frames Cell Events: 392 mean_circ: 0.940457
Ran for 13550 frames Cell Events: 406 mean_circ: 0.940805
Ran for 14050 frames Cell Events: 421 mean_circ: 0.940516
Ran for 15050 frames Cell Events: 450 mean_circ: 0.939244
Ran for 16050 frames Cell Events: 480 mean_circ: 0.939101
Ran for 16550 frames Cell Events: 493 mean_circ: 0.938988
Ran for 17050 frames Cell Events: 502 mean_circ: 0.93848
Ran for 18050 frames Cell Events: 551 mean_circ: 0.937011
Ran for 18550 frames Cell Events: 577 mean_circ: 0.936645
Ran for 19550 frames Cell Events: 619 mean_circ: 0.93641
Ran for 21050 frames Cell Events: 733 mean_circ: 0.934073
Ran for 22550 frames Cell Events: 822 mean_circ: 0.93347
Ran for 23050 frames Cell Events: 840 mean_circ: 0.933603
Ran for 23550 frames Cell Events: 855 mean_circ: 0.933464
Ran for 24050 frames Cell Events: 865 mean_circ: 0.93331
Ran for 24550 frames Cell Events: 872 mean_circ: 0.933475
Ran for 25050 frames Cell Events: 890 mean_circ: 0.93391
Ran for 25550 frames Cell Events: 907 mean_circ: 0.934023
Ran for 26050 frames Cell Events: 927 mean_circ: 0.934456
Ran for 26550 frames Cell Events: 941 mean_circ: 0.934653
Ran for 27550 frames Cell Events: 956 mean_circ: 0.935045
Ran for 28050 frames Cell Events: 971 mean_circ: 0.935439
Ran for 28550 frames Cell Events: 976 mean_circ: 0.935398
Ran for 29050 frames Cell Events: 990 mean_circ: 0.935465
Ran for 30550 frames Cell Events: 1028 mean_circ: 0.935225
Ran for 31550 frames Cell Events: 1055 mean_circ: 0.935275
Ran for 32050 frames Cell Events: 1069 mean_circ: 0.935344
Ran for 33050 frames Cell Events: 1097 mean_circ: 0.935216
Ran for 34050 frames Cell Events: 1116 mean_circ: 0.935451
Ran for 35050 frames Cell Events: 1148 mean_circ: 0.93569
Ran for 35550 frames Cell Events: 1156 mean_circ: 0.935649
Ran for 36050 frames Cell Events: 1169 mean_circ: 0.935825
Ran for 36550 frames Cell Events: 1185 mean_circ: 0.935892
Ran for 37550 frames Cell Events: 1208 mean_circ: 0.935754
Ran for 38050 frames Cell Events: 1223 mean_circ: 0.935991
Ran for 38550 frames Cell Events: 1242 mean_circ: 0.935818
Ran for 39550 frames Cell Events: 1262 mean_circ: 0.935692
Ran for 40050 frames Cell Events: 1280 mean_circ: 0.935278
Ran for 41050 frames Cell Events: 1311 mean_circ: 0.935173
Ran for 42050 frames Cell Events: 1345 mean_circ: 0.935241
Ran for 42550 frames Cell Events: 1356 mean_circ: 0.93525
Ran for 43050 frames Cell Events: 1362 mean_circ: 0.935347
Ran for 45050 frames Cell Events: 1419 mean_circ: 0.935177
Ran for 45550 frames Cell Events: 1432 mean_circ: 0.935418
Ran for 46050 frames Cell Events: 1445 mean_circ: 0.935383
Ran for 46550 frames Cell Events: 1459 mean_circ: 0.935362
Ran for 47550 frames Cell Events: 1499 mean_circ: 0.935552
Ran for 48050 frames Cell Events: 1520 mean_circ: 0.935314
Ran for 49550 frames Cell Events: 1552 mean_circ: 0.935763
Ran for 51050 frames Cell Events: 1602 mean_circ: 0.935693
Ran for 51550 frames Cell Events: 1611 mean_circ: 0.935751
Ran for 52050 frames Cell Events: 1630 mean_circ: 0.935772
Ran for 52550 frames Cell Events: 1638 mean_circ: 0.935847
Ran for 53050 frames Cell Events: 1648 mean_circ: 0.935824
Ran for 54050 frames Cell Events: 1678 mean_circ: 0.935818
Ran for 54550 frames Cell Events: 1691 mean_circ: 0.935817
Ran for 55050 frames Cell Events: 1711 mean_circ: 0.935859
Ran for 56550 frames Cell Events: 1757 mean_circ: 0.935762
Ran for 57050 frames Cell Events: 1763 mean_circ: 0.935764
Ran for 57550 frames Cell Events: 1777 mean_circ: 0.935902
Ran for 58550 frames Cell Events: 1801 mean_circ: 0.936212
Ran for 59050 frames Cell Events: 1813 mean_circ: 0.93649
Ran for 60050 frames Cell Events: 1842 mean_circ: 0.93662
Ran for 60550 frames Cell Events: 1861 mean_circ: 0.936852
Ran for 61050 frames Cell Events: 1878 mean_circ: 0.936981
Ran for 63050 frames Cell Events: 1949 mean_circ: 0.936976
Ran for 64050 frames Cell Events: 1982 mean_circ: 0.93724
Ran for 64550 frames Cell Events: 1993 mean_circ: 0.937239
Ran for 66050 frames Cell Events: 2036 mean_circ: 0.936953
Ran for 66550 frames Cell Events: 2046 mean_circ: 0.936991
Ran for 67050 frames Cell Events: 2057 mean_circ: 0.937003
Ran for 67550 frames Cell Events: 2075 mean_circ: 0.937
Ran for 68050 frames Cell Events: 2091 mean_circ: 0.936809
Ran for 68550 frames Cell Events: 2100 mean_circ: 0.936821
Ran for 70050 frames Cell Events: 2148 mean_circ: 0.936738
Ran for 70550 frames Cell Events: 2166 mean_circ: 0.936869
Ran for 71550 frames Cell Events: 2194 mean_circ: 0.936959
Ran for 73050 frames Cell Events: 2249 mean_circ: 0.937152
Ran for 74050 frames Cell Events: 2283 mean_circ: 0.936985
Ran for 74550 frames Cell Events: 2300 mean_circ: 0.937131
Ran for 75550 frames Cell Events: 2321 mean_circ: 0.937146
Ran for 76050 frames Cell Events: 2335 mean_circ: 0.937188
Ran for 76550 frames Cell Events: 2350 mean_circ: 0.937241
Ran for 77550 frames Cell Events: 2382 mean_circ: 0.93734
Ran for 79050 frames Cell Events: 2431 mean_circ: 0.937187
Ran for 79550 frames Cell Events: 2440 mean_circ: 0.937135
Ran for 80550 frames Cell Events: 2467 mean_circ: 0.93705
Ran for 81050 frames Cell Events: 2473 mean_circ: 0.937064
Ran for 81550 frames Cell Events: 2489 mean_circ: 0.937094
Ran for 82050 frames Cell Events: 2503 mean_circ: 0.937125
Ran for 83050 frames Cell Events: 2535 mean_circ: 0.937136
Ran for 83550 frames Cell Events: 2544 mean_circ: 0.937128
Ran for 84050 frames Cell Events: 2560 mean_circ: 0.937162
Ran for 84550 frames Cell Events: 2576 mean_circ: 0.93729
Ran for 85050 frames Cell Events: 2595 mean_circ: 0.937251
Ran for 85550 frames Cell Events: 2603 mean_circ: 0.937262
Ran for 86550 frames Cell Events: 2630 mean_circ: 0.93733
Ran for 87050 frames Cell Events: 2642 mean_circ: 0.937409
Ran for 87550 frames Cell Events: 2654 mean_circ: 0.937298
Ran for 88550 frames Cell Events: 2691 mean_circ: 0.937238
Ran for 89050 frames Cell Events: 2711 mean_circ: 0.937219
Ran for 89550 frames Cell Events: 2723 mean_circ: 0.937315
Ran for 90050 frames Cell Events: 2733 mean_circ: 0.937373
Ran for 90550 frames Cell Events: 2744 mean_circ: 0.937384
Ran for 91050 frames Cell Events: 2762 mean_circ: 0.937498
Ran for 91550 frames Cell Events: 2774 mean_circ: 0.937534
Ran for 92050 frames Cell Events: 2788 mean_circ: 0.937479
Ran for 92550 frames Cell Events: 2809 mean_circ: 0.937562
Ran for 93050 frames Cell Events: 2820 mean_circ: 0.937524
Ran for 93550 frames Cell Events: 2831 mean_circ: 0.937534
Ran for 94050 frames Cell Events: 2846 mean_circ: 0.937438
Ran for 94550 frames Cell Events: 2856 mean_circ: 0.937443
Ran for 95050 frames Cell Events: 2863 mean_circ: 0.937457
Ran for 95550 frames Cell Events: 2889 mean_circ: 0.937379
Ran for 96050 frames Cell Events: 2901 mean_circ: 0.937536
Ran for 96550 frames Cell Events: 2912 mean_circ: 0.937631
Ran for 97050 frames Cell Events: 2928 mean_circ: 0.937527
Ran for 97550 frames Cell Events: 2937 mean_circ: 0.937533
Ran for 98550 frames Cell Events: 2970 mean_circ: 0.93763
Ran for 99050 frames Cell Events: 2997 mean_circ: 0.937712
Ran for 100550 frames Cell Events: 3023 mean_circ: 0.93757
Ran for 102550 frames Cell Events: 3092 mean_circ: 0.937521
Ran for 103550 frames Cell Events: 3119 mean_circ: 0.937524
Ran for 104050 frames Cell Events: 3128 mean_circ: 0.937524
Ran for 105050 frames Cell Events: 3169 mean_circ: 0.93738
Ran for 105550 frames Cell Events: 3180 mean_circ: 0.937363
Ran for 106050 frames Cell Events: 3194 mean_circ: 0.93736
Ran for 106550 frames Cell Events: 3213 mean_circ: 0.937371
Ran for 107050 frames Cell Events: 3228 mean_circ: 0.937347
Ran for 107550 frames Cell Events: 3243 mean_circ: 0.937383
Ran for 108050 frames Cell Events: 3258 mean_circ: 0.937434
Ran for 108550 frames Cell Events: 3277 mean_circ: 0.937471
Ran for 109050 frames Cell Events: 3298 mean_circ: 0.9375
Ran for 109550 frames Cell Events: 3316 mean_circ: 0.937644
Ran for 110050 frames Cell Events: 3328 mean_circ: 0.937709
Ran for 110550 frames Cell Events: 3338 mean_circ: 0.937744
Ran for 111550 frames Cell Events: 3360 mean_circ: 0.937685
Ran for 112050 frames Cell Events: 3379 mean_circ: 0.937738
Ran for 112550 frames Cell Events: 3387 mean_circ: 0.937726
Ran for 113050 frames Cell Events: 3394 mean_circ: 0.937724
Ran for 113550 frames Cell Events: 3403 mean_circ: 0.937702
Ran for 114050 frames Cell Events: 3420 mean_circ: 0.93769
Ran for 114550 frames Cell Events: 3435 mean_circ: 0.937611
Ran for 115050 frames Cell Events: 3449 mean_circ: 0.937615
Ran for 116050 frames Cell Events: 3485 mean_circ: 0.937547
Ran for 117050 frames Cell Events: 3515 mean_circ: 0.937617
Ran for 117550 frames Cell Events: 3531 mean_circ: 0.93744
Ran for 118050 frames Cell Events: 3545 mean_circ: 0.937497
Ran for 119050 frames Cell Events: 3579 mean_circ: 0.937534
Ran for 120550 frames Cell Events: 3630 mean_circ: 0.937608
Ran for 121050 frames Cell Events: 3662 mean_circ: 0.937499
Ran for 122550 frames Cell Events: 3700 mean_circ: 0.937568
Ran for 123050 frames Cell Events: 3717 mean_circ: 0.937636
Ran for 123550 frames Cell Events: 3733 mean_circ: 0.937675
Ran for 124550 frames Cell Events: 3766 mean_circ: 0.937628
Ran for 126050 frames Cell Events: 3835 mean_circ: 0.937436
Ran for 126550 frames Cell Events: 3849 mean_circ: 0.937526
Ran for 127550 frames Cell Events: 3893 mean_circ: 0.937607
Ran for 128050 frames Cell Events: 3906 mean_circ: 0.937644
Ran for 130050 frames Cell Events: 3973 mean_circ: 0.937759
Ran for 131050 frames Cell Events: 4035 mean_circ: 0.93784
Ran for 132050 frames Cell Events: 4082 mean_circ: 0.937895
Ran for 133050 frames Cell Events: 4120 mean_circ: 0.937891
Ran for 134050 frames Cell Events: 4156 mean_circ: 0.937944
Ran for 134550 frames Cell Events: 4172 mean_circ: 0.937867
Ran for 135050 frames Cell Events: 4195 mean_circ: 0.937743
Ran for 135550 frames Cell Events: 4210 mean_circ: 0.937782
Ran for 136050 frames Cell Events: 4228 mean_circ: 0.937813
Ran for 136550 frames Cell Events: 4246 mean_circ: 0.937767
Ran for 137050 frames Cell Events: 4251 mean_circ: 0.937766
Ran for 137550 frames Cell Events: 4261 mean_circ: 0.93775
Ran for 138050 frames Cell Events: 4274 mean_circ: 0.937736
Ran for 138550 frames Cell Events: 4289 mean_circ: 0.937722
Ran for 139050 frames Cell Events: 4301 mean_circ: 0.937727
Ran for 139550 frames Cell Events: 4314 mean_circ: 0.937742
Ran for 140050 frames Cell Events: 4330 mean_circ: 0.93772
Ran for 141050 frames Cell Events: 4367 mean_circ: 0.937715
Ran for 141550 frames Cell Events: 4392 mean_circ: 0.937579
Ran for 142050 frames Cell Events: 4409 mean_circ: 0.937508
Ran for 143550 frames Cell Events: 4444 mean_circ: 0.937483
Ran for 144050 frames Cell Events: 4464 mean_circ: 0.93753
Ran for 144550 frames Cell Events: 4475 mean_circ: 0.937478
Ran for 145050 frames Cell Events: 4499 mean_circ: 0.937496
Ran for 145550 frames Cell Events: 4521 mean_circ: 0.937469
Ran for 146050 frames Cell Events: 4534 mean_circ: 0.937514
Ran for 146550 frames Cell Events: 4545 mean_circ: 0.937462
Ran for 147050 frames Cell Events: 4553 mean_circ: 0.937506
Ran for 147550 frames Cell Events: 4571 mean_circ: 0.937564
Ran for 148550 frames Cell Events: 4597 mean_circ: 0.937458
Ran for 149050 frames Cell Events: 4609 mean_circ: 0.937485
Ran for 149550 frames Cell Events: 4625 mean_circ: 0.937472
Ran for 150050 frames Cell Events: 4648 mean_circ: 0.937472
Ran for 150550 frames Cell Events: 4669 mean_circ: 0.937461
Ran for 151050 frames Cell Events: 4683 mean_circ: 0.937468
Ran for 151550 frames Cell Events: 4699 mean_circ: 0.937446
Ran for 152550 frames Cell Events: 4731 mean_circ: 0.937433
Ran for 153050 frames Cell Events: 4745 mean_circ: 0.937389
Ran for 153550 frames Cell Events: 4751 mean_circ: 0.937326
Ran for 154050 frames Cell Events: 4759 mean_circ: 0.937358
Ran for 154550 frames Cell Events: 4781 mean_circ: 0.937387
Ran for 155050 frames Cell Events: 4796 mean_circ: 0.937308
Ran for 155550 frames Cell Events: 4803 mean_circ: 0.937292
Ran for 156050 frames Cell Events: 4820 mean_circ: 0.93733
Ran for 156550 frames Cell Events: 4832 mean_circ: 0.937331
Ran for 157050 frames Cell Events: 4847 mean_circ: 0.93737
Ran for 157550 frames Cell Events: 4860 mean_circ: 0.937393
Ran for 158550 frames Cell Events: 4909 mean_circ: 0.937369
Ran for 160050 frames Cell Events: 4960 mean_circ: 0.937467
Ran for 160550 frames Cell Events: 4988 mean_circ: 0.937393
Ran for 161550 frames Cell Events: 5023 mean_circ: 0.937376
Ran for 162050 frames Cell Events: 5039 mean_circ: 0.937337
Ran for 162550 frames Cell Events: 5056 mean_circ: 0.93735
Ran for 163050 frames Cell Events: 5075 mean_circ: 0.937297
Ran for 163550 frames Cell Events: 5084 mean_circ: 0.93728
Ran for 164050 frames Cell Events: 5097 mean_circ: 0.93725
Ran for 164550 frames Cell Events: 5106 mean_circ: 0.937244
Ran for 165050 frames Cell Events: 5119 mean_circ: 0.937278
Ran for 166050 frames Cell Events: 5163 mean_circ: 0.937128
Ran for 166550 frames Cell Events: 5179 mean_circ: 0.937107
Ran for 167050 frames Cell Events: 5199 mean_circ: 0.937149
Ran for 167550 frames Cell Events: 5216 mean_circ: 0.937095
Ran for 168050 frames Cell Events: 5235 mean_circ: 0.937066
Ran for 168550 frames Cell Events: 5258 mean_circ: 0.937112
Ran for 169050 frames Cell Events: 5270 mean_circ: 0.937126
Ran for 169550 frames Cell Events: 5276 mean_circ: 0.93712
Ran for 170550 frames Cell Events: 5311 mean_circ: 0.937124
Ran for 171050 frames Cell Events: 5328 mean_circ: 0.937173
Ran for 172050 frames Cell Events: 5359 mean_circ: 0.937142
Ran for 172550 frames Cell Events: 5388 mean_circ: 0.937109
Ran for 173050 frames Cell Events: 5409 mean_circ: 0.936982
Ran for 173550 frames Cell Events: 5426 mean_circ: 0.936963
Ran for 174050 frames Cell Events: 5442 mean_circ: 0.936904
Ran for 174550 frames Cell Events: 5467 mean_circ: 0.936789
Ran for 175050 frames Cell Events: 5493 mean_circ: 0.936794
Ran for 176050 frames Cell Events: 5539 mean_circ: 0.936727
Ran for 176550 frames Cell Events: 5559 mean_circ: 0.936736
Ran for 177050 frames Cell Events: 5586 mean_circ: 0.936806
Ran for 177550 frames Cell Events: 5614 mean_circ: 0.936851
Ran for 178050 frames Cell Events: 5631 mean_circ: 0.936808
Ran for 178550 frames Cell Events: 5647 mean_circ: 0.936844
Ran for 179550 frames Cell Events: 5675 mean_circ: 0.936827
Ran for 180050 frames Cell Events: 5684 mean_circ: 0.936825
Ran for 181050 frames Cell Events: 5719 mean_circ: 0.936863
Ran for 182050 frames Cell Events: 5752 mean_circ: 0.936903
Ran for 183050 frames Cell Events: 5794 mean_circ: 0.936925
Ran for 184550 frames Cell Events: 5856 mean_circ: 0.936779
Ran for 185050 frames Cell Events: 5871 mean_circ: 0.936811
Ran for 185550 frames Cell Events: 5885 mean_circ: 0.93677
Ran for 186550 frames Cell Events: 5912 mean_circ: 0.936798
Ran for 187050 frames Cell Events: 5925 mean_circ: 0.936769
Ran for 187550 frames Cell Events: 5940 mean_circ: 0.936749
Ran for 188550 frames Cell Events: 5977 mean_circ: 0.936786
Ran for 189050 frames Cell Events: 5988 mean_circ: 0.936701
Ran for 189550 frames Cell Events: 6008 mean_circ: 0.936738
Ran for 190550 frames Cell Events: 6081 mean_circ: 0.936557
Ran for 191550 frames Cell Events: 6136 mean_circ: 0.936487
Ran for 192550 frames Cell Events: 6198 mean_circ: 0.936317
Ran for 193050 frames Cell Events: 6219 mean_circ: 0.936196
Ran for 193550 frames Cell Events: 6237 mean_circ: 0.936113
Ran for 194050 frames Cell Events: 6257 mean_circ: 0.936138
Ran for 194550 frames Cell Events: 6273 mean_circ: 0.936113
Ran for 195550 frames Cell Events: 6312 mean_circ: 0.936025
Ran for 196550 frames Cell Events: 6344 mean_circ: 0.936087
Ran for 197050 frames Cell Events: 6362 mean_circ: 0.936071
Ran for 198050 frames Cell Events: 6402 mean_circ: 0.936102
Ran for 198550 frames Cell Events: 6425 mean_circ: 0.936095
Ran for 199050 frames Cell Events: 6436 mean_circ: 0.936098
Ran for 200550 frames Cell Events: 6483 mean_circ: 0.936093
Ran for 201550 frames Cell Events: 6510 mean_circ: 0.936028
Ran for 202050 frames Cell Events: 6525 mean_circ: 0.936057
Ran for 202550 frames Cell Events: 6557 mean_circ: 0.936078
Ran for 203550 frames Cell Events: 6578 mean_circ: 0.936089
Ran for 204050 frames Cell Events: 6594 mean_circ: 0.936112
Ran for 204550 frames Cell Events: 6615 mean_circ: 0.936114
Ran for 205050 frames Cell Events: 6633 mean_circ: 0.936055
Ran for 206550 frames Cell Events: 6693 mean_circ: 0.936
Ran for 207050 frames Cell Events: 6701 mean_circ: 0.93603
Ran for 207550 frames Cell Events: 6711 mean_circ: 0.935993
Ran for 208050 frames Cell Events: 6721 mean_circ: 0.936005
Ran for 208550 frames Cell Events: 6735 mean_circ: 0.935992
Ran for 209550 frames Cell Events: 6777 mean_circ: 0.93599
Ran for 210050 frames Cell Events: 6787 mean_circ: 0.936012
Ran for 210550 frames Cell Events: 6802 mean_circ: 0.936024
Ran for 211550 frames Cell Events: 6844 mean_circ: 0.936014
Ran for 212050 frames Cell Events: 6862 mean_circ: 0.936064
Ran for 212550 frames Cell Events: 6883 mean_circ: 0.936092
Ran for 214050 frames Cell Events: 6943 mean_circ: 0.93604
Ran for 214550 frames Cell Events: 6962 mean_circ: 0.936047
Ran for 215050 frames Cell Events: 6974 mean_circ: 0.936045
Ran for 215550 frames Cell Events: 6985 mean_circ: 0.936084
Ran for 216050 frames Cell Events: 7003 mean_circ: 0.936077
Ran for 218050 frames Cell Events: 7068 mean_circ: 0.936154
Ran for 218550 frames Cell Events: 7088 mean_circ: 0.936102
Ran for 219050 frames Cell Events: 7099 mean_circ: 0.936123
Ran for 220050 frames Cell Events: 7129 mean_circ: 0.936087
Ran for 221550 frames Cell Events: 7177 mean_circ: 0.936087
Ran for 222050 frames Cell Events: 7189 mean_circ: 0.936109
Ran for 223050 frames Cell Events: 7236 mean_circ: 0.936207
Ran for 223550 frames Cell Events: 7246 mean_circ: 0.936223
Ran for 224050 frames Cell Events: 7268 mean_circ: 0.93618
Ran for 224550 frames Cell Events: 7301 mean_circ: 0.936201
Ran for 225550 frames Cell Events: 7352 mean_circ: 0.936201
Ran for 226050 frames Cell Events: 7363 mean_circ: 0.936192
Ran for 226550 frames Cell Events: 7379 mean_circ: 0.936184
Ran for 227050 frames Cell Events: 7395 mean_circ: 0.936247
Ran for 228050 frames Cell Events: 7426 mean_circ: 0.936222
Ran for 228550 frames Cell Events: 7438 mean_circ: 0.936212
Ran for 229050 frames Cell Events: 7448 mean_circ: 0.936226
Ran for 230050 frames Cell Events: 7485 mean_circ: 0.936169
Ran for 231050 frames Cell Events: 7519 mean_circ: 0.936172
Ran for 231550 frames Cell Events: 7533 mean_circ: 0.936113
Ran for 232050 frames Cell Events: 7549 mean_circ: 0.936125
Ran for 232550 frames Cell Events: 7564 mean_circ: 0.93614
Ran for 233050 frames Cell Events: 7578 mean_circ: 0.93607
Ran for 233550 frames Cell Events: 7592 mean_circ: 0.936091
Ran for 234050 frames Cell Events: 7608 mean_circ: 0.936147
Ran for 234550 frames Cell Events: 7620 mean_circ: 0.936106
Ran for 235050 frames Cell Events: 7636 mean_circ: 0.936134
Ran for 236050 frames Cell Events: 7672 mean_circ: 0.936141
Ran for 236550 frames Cell Events: 7688 mean_circ: 0.93618
Ran for 237050 frames Cell Events: 7695 mean_circ: 0.936151
Ran for 237550 frames Cell Events: 7710 mean_circ: 0.93617
Ran for 238050 frames Cell Events: 7721 mean_circ: 0.936171
Ran for 239050 frames Cell Events: 7755 mean_circ: 0.93621
Ran for 240050 frames Cell Events: 7798 mean_circ: 0.936125
Ran for 240550 frames Cell Events: 7816 mean_circ: 0.936142
Ran for 241050 frames Cell Events: 7829 mean_circ: 0.93613
Ran for 241550 frames Cell Events: 7846 mean_circ: 0.936158
Ran for 242050 frames Cell Events: 7858 mean_circ: 0.936158
Ran for 242550 frames Cell Events: 7873 mean_circ: 0.936166
Ran for 243550 frames Cell Events: 7906 mean_circ: 0.936039
Ran for 245050 frames Cell Events: 7954 mean_circ: 0.936045
Ran for 245550 frames Cell Events: 7970 mean_circ: 0.936085
Ran for 246050 frames Cell Events: 7980 mean_circ: 0.936049
Ran for 247050 frames Cell Events: 8002 mean_circ: 0.936035
Ran for 248050 frames Cell Events: 8036 mean_circ: 0.936002
Ran for 248550 frames Cell Events: 8052 mean_circ: 0.935979
Ran for 249050 frames Cell Events: 8062 mean_circ: 0.935974
Ran for 249550 frames Cell Events: 8074 mean_circ: 0.935976
Ran for 250050 frames Cell Events: 8089 mean_circ: 0.935967
Ran for 251050 frames Cell Events: 8117 mean_circ: 0.935992
End this measurment..
Stopping time: 3.84221e+008
****************************************
Measurement finished
Mean Circularitiy: 0.935986
Mean Area: 672.287
Mean FL-1 intensity: 3027.95
Mean FL-2 intensity: 3880.88
Mean FL-3 intensity: 0
frames processed: 250137
Total Time: 125744ms
Number of Runs (new bg img) 0
Frames collected: 251375
Skipped frames: 4028
Rescued Frames: 579997
Samples DAQ: 62843641
Samples written: 125687190
Samples per Channel: 62843595
FPS: 1999.09
Samples per second: 499772
Expected samples/s: 500000
Events: 8135
Events per second: 64.6947
jumped back (PMT): 5371
#Frames read, frequency
# 0 frames :345738
# 1 frames :139754
# 2 frames :5045
# 3 frames :1829
# 4 frames :900
# 5 frames :355
# 6 frames :1437
# 7 frames :2070
# 8 frames :915
# 9 frames :611
# 10 frames :1511
# 11 frames :528
# 12 frames :461
# 13 frames :254
# 14 frames :195
# 15 frames :170
# 16 frames :159
# 17 frames :105
# 18 frames :92
# 19 frames :64
# 20 frames :67
# 21 frames :79
# 22 frames :59
# 23 frames :54
# 24 frames :35
# 25 frames :24
# 26 frames :19
# 27 frames :17
# 28 frames :11
# 29 frames :10
# 30 frames :10
# 31 frames :5
# 32 frames :5
# 33 frames :5
# 34 frames :6
# 35 frames :6
# 36 frames :7
# 37 frames :4
# 38 frames :4
# 39 frames :3
# 40 frames :5
# 41 frames :1
# 42 frames :2
# 43 frames :3
# 44 frames :1
# 45 frames :3
# 46 frames :2
# 49 frames :1
# 50 frames :2
# 51 frames :2
# 54 frames :1
# 58 frames :2
# 59 frames :1
# 60 frames :1
# 64 frames :1
# 66 frames :1
# 73 frames :1
# 76 frames :1
M1_para.ini
[General]
Measurement Number = 1
Flow Rate [ul/s] = 0.04
Region = "Channel"
Channel width = 20
Current LED = 100
[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 6
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0
#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 24.7564
parameters.txt
#fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 6
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 300
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0