Click on the log titles below to expand the log entries present in this DC resource.
dclab-export_2024-07-10_14.14.42
{"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc
{
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "a47726cdb996aded737269c641ed2f08",
"name": "M1_20170608_1319_dsRNA_T1_col.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "12:15:03"
}
}
dclab-tdms2rtdc-warnings
LimitingExportSizeWarning
in dclab.rtdc_dataset.export line 305:
Not all features have the same length! Limiting output event count to 8454 (max 8455) in '8454'.
FG_Config.mcf
[Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;
[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;
[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini
[Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6
[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini
[EVENT LOG] fRT-DC V1.06170206
Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 24.6802
Start pulse train for BG Aquisition..
Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 2.09138e+009
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 550 frames Cell Events: 9 mean_circ: 0.955519
Ran for 1550 frames Cell Events: 30 mean_circ: 0.956467
Ran for 2050 frames Cell Events: 47 mean_circ: 0.959023
Ran for 3550 frames Cell Events: 70 mean_circ: 0.956818
Ran for 4050 frames Cell Events: 81 mean_circ: 0.95419
Ran for 5050 frames Cell Events: 114 mean_circ: 0.953344
Ran for 5550 frames Cell Events: 131 mean_circ: 0.952701
Ran for 6050 frames Cell Events: 148 mean_circ: 0.954199
Ran for 6550 frames Cell Events: 156 mean_circ: 0.95386
Ran for 7050 frames Cell Events: 166 mean_circ: 0.953304
Ran for 7550 frames Cell Events: 179 mean_circ: 0.952547
Ran for 8050 frames Cell Events: 194 mean_circ: 0.95205
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Ran for 9050 frames Cell Events: 211 mean_circ: 0.952037
Ran for 10050 frames Cell Events: 238 mean_circ: 0.9516
Ran for 11050 frames Cell Events: 280 mean_circ: 0.950266
Ran for 11550 frames Cell Events: 289 mean_circ: 0.949862
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Ran for 13550 frames Cell Events: 351 mean_circ: 0.95034
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Ran for 14550 frames Cell Events: 377 mean_circ: 0.95093
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Ran for 28050 frames Cell Events: 686 mean_circ: 0.950493
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Ran for 29050 frames Cell Events: 704 mean_circ: 0.950843
Ran for 30550 frames Cell Events: 745 mean_circ: 0.951108
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Ran for 31550 frames Cell Events: 767 mean_circ: 0.951033
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Ran for 63550 frames Cell Events: 1538 mean_circ: 0.951011
Ran for 64050 frames Cell Events: 1548 mean_circ: 0.950962
Ran for 64550 frames Cell Events: 1557 mean_circ: 0.950998
Ran for 65050 frames Cell Events: 1571 mean_circ: 0.951155
Ran for 65550 frames Cell Events: 1582 mean_circ: 0.951179
Ran for 66550 frames Cell Events: 1608 mean_circ: 0.950971
Ran for 67050 frames Cell Events: 1617 mean_circ: 0.951003
Ran for 68050 frames Cell Events: 1647 mean_circ: 0.950922
Ran for 68550 frames Cell Events: 1658 mean_circ: 0.950904
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Ran for 72050 frames Cell Events: 1741 mean_circ: 0.95083
Ran for 73550 frames Cell Events: 1785 mean_circ: 0.950699
Ran for 74050 frames Cell Events: 1801 mean_circ: 0.950744
Ran for 74550 frames Cell Events: 1816 mean_circ: 0.950791
Ran for 75050 frames Cell Events: 1831 mean_circ: 0.950861
Ran for 75550 frames Cell Events: 1843 mean_circ: 0.950895
Ran for 76050 frames Cell Events: 1860 mean_circ: 0.950903
Ran for 76550 frames Cell Events: 1874 mean_circ: 0.950903
Ran for 77050 frames Cell Events: 1882 mean_circ: 0.950885
Ran for 77550 frames Cell Events: 1896 mean_circ: 0.950872
Ran for 78050 frames Cell Events: 1905 mean_circ: 0.950969
Ran for 78550 frames Cell Events: 1917 mean_circ: 0.950955
Ran for 80050 frames Cell Events: 1956 mean_circ: 0.951102
Ran for 80550 frames Cell Events: 1966 mean_circ: 0.951069
Ran for 81050 frames Cell Events: 1978 mean_circ: 0.950907
Ran for 82050 frames Cell Events: 2004 mean_circ: 0.950951
Ran for 83050 frames Cell Events: 2027 mean_circ: 0.950953
Ran for 85050 frames Cell Events: 2088 mean_circ: 0.950858
Ran for 85550 frames Cell Events: 2095 mean_circ: 0.950868
Ran for 86050 frames Cell Events: 2114 mean_circ: 0.950898
Ran for 86550 frames Cell Events: 2124 mean_circ: 0.950992
Ran for 87050 frames Cell Events: 2145 mean_circ: 0.950993
Ran for 87550 frames Cell Events: 2160 mean_circ: 0.950862
Ran for 89050 frames Cell Events: 2199 mean_circ: 0.950659
Ran for 90050 frames Cell Events: 2223 mean_circ: 0.950814
Ran for 91050 frames Cell Events: 2246 mean_circ: 0.950682
Ran for 91550 frames Cell Events: 2263 mean_circ: 0.950754
Ran for 92050 frames Cell Events: 2271 mean_circ: 0.950843
Ran for 93050 frames Cell Events: 2290 mean_circ: 0.950748
Ran for 93550 frames Cell Events: 2300 mean_circ: 0.950778
Ran for 94050 frames Cell Events: 2307 mean_circ: 0.950798
Ran for 94550 frames Cell Events: 2321 mean_circ: 0.950838
Ran for 95050 frames Cell Events: 2336 mean_circ: 0.950885
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Ran for 97050 frames Cell Events: 2366 mean_circ: 0.951059
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Ran for 102050 frames Cell Events: 2495 mean_circ: 0.951158
Ran for 102550 frames Cell Events: 2506 mean_circ: 0.951108
Ran for 103050 frames Cell Events: 2511 mean_circ: 0.951125
Ran for 103550 frames Cell Events: 2529 mean_circ: 0.950969
Ran for 104050 frames Cell Events: 2548 mean_circ: 0.950905
Ran for 104550 frames Cell Events: 2556 mean_circ: 0.950897
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Ran for 105550 frames Cell Events: 2575 mean_circ: 0.950843
Ran for 107050 frames Cell Events: 2616 mean_circ: 0.950933
Ran for 107550 frames Cell Events: 2623 mean_circ: 0.95097
Ran for 108050 frames Cell Events: 2629 mean_circ: 0.95099
Ran for 108550 frames Cell Events: 2636 mean_circ: 0.951022
Ran for 109050 frames Cell Events: 2651 mean_circ: 0.951035
Ran for 109550 frames Cell Events: 2664 mean_circ: 0.951082
Ran for 110550 frames Cell Events: 2705 mean_circ: 0.950964
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Ran for 111550 frames Cell Events: 2737 mean_circ: 0.950946
Ran for 112050 frames Cell Events: 2758 mean_circ: 0.95092
Ran for 113050 frames Cell Events: 2782 mean_circ: 0.950815
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Ran for 115550 frames Cell Events: 2842 mean_circ: 0.950743
Ran for 116050 frames Cell Events: 2859 mean_circ: 0.950815
Ran for 117050 frames Cell Events: 2884 mean_circ: 0.95083
Ran for 117550 frames Cell Events: 2898 mean_circ: 0.950838
Ran for 118050 frames Cell Events: 2919 mean_circ: 0.950814
Ran for 118550 frames Cell Events: 2935 mean_circ: 0.950851
Ran for 119550 frames Cell Events: 2961 mean_circ: 0.95079
Ran for 120050 frames Cell Events: 2975 mean_circ: 0.950746
Ran for 120550 frames Cell Events: 2987 mean_circ: 0.950724
Ran for 121050 frames Cell Events: 2999 mean_circ: 0.95075
Ran for 121550 frames Cell Events: 3013 mean_circ: 0.95069
Ran for 122050 frames Cell Events: 3016 mean_circ: 0.950674
Ran for 123550 frames Cell Events: 3057 mean_circ: 0.950627
Ran for 124050 frames Cell Events: 3067 mean_circ: 0.950629
Ran for 124550 frames Cell Events: 3078 mean_circ: 0.950663
Ran for 125050 frames Cell Events: 3092 mean_circ: 0.950717
Ran for 125550 frames Cell Events: 3109 mean_circ: 0.950681
Ran for 126050 frames Cell Events: 3121 mean_circ: 0.950703
Ran for 126550 frames Cell Events: 3140 mean_circ: 0.950627
Ran for 127050 frames Cell Events: 3151 mean_circ: 0.95065
Ran for 127550 frames Cell Events: 3161 mean_circ: 0.950675
Ran for 128550 frames Cell Events: 3184 mean_circ: 0.950672
Ran for 129550 frames Cell Events: 3210 mean_circ: 0.950688
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Ran for 130550 frames Cell Events: 3243 mean_circ: 0.9507
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Ran for 131550 frames Cell Events: 3272 mean_circ: 0.950711
Ran for 132050 frames Cell Events: 3302 mean_circ: 0.950646
Ran for 132550 frames Cell Events: 3322 mean_circ: 0.950537
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Ran for 156550 frames Cell Events: 3941 mean_circ: 0.950263
Ran for 157050 frames Cell Events: 3961 mean_circ: 0.950321
Ran for 157550 frames Cell Events: 3977 mean_circ: 0.950249
Ran for 158550 frames Cell Events: 4009 mean_circ: 0.950248
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Ran for 161550 frames Cell Events: 4070 mean_circ: 0.950308
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Ran for 163550 frames Cell Events: 4111 mean_circ: 0.950236
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Ran for 166050 frames Cell Events: 4176 mean_circ: 0.950251
Ran for 167050 frames Cell Events: 4195 mean_circ: 0.95026
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Ran for 171550 frames Cell Events: 4325 mean_circ: 0.950192
Ran for 172050 frames Cell Events: 4340 mean_circ: 0.950154
Ran for 172550 frames Cell Events: 4349 mean_circ: 0.950179
Ran for 173050 frames Cell Events: 4361 mean_circ: 0.950186
Ran for 173550 frames Cell Events: 4369 mean_circ: 0.950213
Ran for 174050 frames Cell Events: 4385 mean_circ: 0.950223
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Ran for 176550 frames Cell Events: 4448 mean_circ: 0.950212
Ran for 177050 frames Cell Events: 4460 mean_circ: 0.950201
Ran for 177550 frames Cell Events: 4472 mean_circ: 0.950159
Ran for 178050 frames Cell Events: 4485 mean_circ: 0.950166
Ran for 179050 frames Cell Events: 4512 mean_circ: 0.950204
Ran for 179550 frames Cell Events: 4522 mean_circ: 0.950199
Ran for 180050 frames Cell Events: 4532 mean_circ: 0.9502
Ran for 180550 frames Cell Events: 4549 mean_circ: 0.950251
Ran for 181050 frames Cell Events: 4561 mean_circ: 0.9502
Ran for 181550 frames Cell Events: 4575 mean_circ: 0.950226
Ran for 182050 frames Cell Events: 4586 mean_circ: 0.950265
Ran for 183050 frames Cell Events: 4614 mean_circ: 0.950255
Ran for 183550 frames Cell Events: 4628 mean_circ: 0.950215
Ran for 184050 frames Cell Events: 4647 mean_circ: 0.950265
Ran for 184550 frames Cell Events: 4666 mean_circ: 0.950242
Ran for 185050 frames Cell Events: 4681 mean_circ: 0.950232
Ran for 186050 frames Cell Events: 4708 mean_circ: 0.950282
Ran for 186550 frames Cell Events: 4716 mean_circ: 0.950293
Ran for 187550 frames Cell Events: 4746 mean_circ: 0.950392
Ran for 188550 frames Cell Events: 4776 mean_circ: 0.950417
Ran for 189050 frames Cell Events: 4797 mean_circ: 0.950416
Ran for 189550 frames Cell Events: 4815 mean_circ: 0.95036
Ran for 190050 frames Cell Events: 4831 mean_circ: 0.950384
Ran for 190550 frames Cell Events: 4844 mean_circ: 0.95039
Ran for 191050 frames Cell Events: 4857 mean_circ: 0.950436
Ran for 191550 frames Cell Events: 4872 mean_circ: 0.95047
Ran for 192050 frames Cell Events: 4884 mean_circ: 0.950457
Ran for 192550 frames Cell Events: 4899 mean_circ: 0.950451
Ran for 193050 frames Cell Events: 4920 mean_circ: 0.950476
Ran for 194050 frames Cell Events: 4947 mean_circ: 0.950478
Ran for 194550 frames Cell Events: 4955 mean_circ: 0.950482
Ran for 197050 frames Cell Events: 5029 mean_circ: 0.950482
Ran for 197550 frames Cell Events: 5042 mean_circ: 0.950494
Ran for 198550 frames Cell Events: 5073 mean_circ: 0.950488
Ran for 199050 frames Cell Events: 5079 mean_circ: 0.950496
Ran for 199550 frames Cell Events: 5090 mean_circ: 0.950505
Ran for 200550 frames Cell Events: 5108 mean_circ: 0.950542
Ran for 201050 frames Cell Events: 5122 mean_circ: 0.950556
Ran for 201550 frames Cell Events: 5136 mean_circ: 0.950566
Ran for 202050 frames Cell Events: 5158 mean_circ: 0.950591
Ran for 204050 frames Cell Events: 5214 mean_circ: 0.950587
Ran for 205050 frames Cell Events: 5241 mean_circ: 0.950613
Ran for 206050 frames Cell Events: 5267 mean_circ: 0.95058
Ran for 207050 frames Cell Events: 5295 mean_circ: 0.950536
Ran for 207550 frames Cell Events: 5306 mean_circ: 0.950558
Ran for 208050 frames Cell Events: 5316 mean_circ: 0.950557
Ran for 208550 frames Cell Events: 5330 mean_circ: 0.950549
Ran for 209050 frames Cell Events: 5346 mean_circ: 0.950549
Ran for 210050 frames Cell Events: 5380 mean_circ: 0.95056
Ran for 211050 frames Cell Events: 5415 mean_circ: 0.950543
Ran for 211550 frames Cell Events: 5428 mean_circ: 0.950523
Ran for 212050 frames Cell Events: 5449 mean_circ: 0.950429
Ran for 212550 frames Cell Events: 5462 mean_circ: 0.950449
Ran for 213050 frames Cell Events: 5476 mean_circ: 0.95047
Ran for 213550 frames Cell Events: 5490 mean_circ: 0.950447
Ran for 214050 frames Cell Events: 5501 mean_circ: 0.950454
Ran for 214550 frames Cell Events: 5516 mean_circ: 0.950472
Ran for 215050 frames Cell Events: 5523 mean_circ: 0.950467
Ran for 215550 frames Cell Events: 5537 mean_circ: 0.950446
Ran for 217050 frames Cell Events: 5595 mean_circ: 0.950325
Ran for 217550 frames Cell Events: 5606 mean_circ: 0.950318
Ran for 218050 frames Cell Events: 5624 mean_circ: 0.950313
Ran for 218550 frames Cell Events: 5642 mean_circ: 0.950357
Ran for 219550 frames Cell Events: 5661 mean_circ: 0.950309
Ran for 220050 frames Cell Events: 5675 mean_circ: 0.950281
Ran for 221050 frames Cell Events: 5689 mean_circ: 0.950319
Ran for 221550 frames Cell Events: 5706 mean_circ: 0.950342
Ran for 222050 frames Cell Events: 5720 mean_circ: 0.950326
Ran for 222550 frames Cell Events: 5738 mean_circ: 0.950329
Ran for 223050 frames Cell Events: 5760 mean_circ: 0.950354
Ran for 224050 frames Cell Events: 5798 mean_circ: 0.950315
Ran for 224550 frames Cell Events: 5811 mean_circ: 0.950302
Ran for 225050 frames Cell Events: 5826 mean_circ: 0.950278
Ran for 225550 frames Cell Events: 5845 mean_circ: 0.950289
Ran for 226050 frames Cell Events: 5861 mean_circ: 0.95025
Ran for 226550 frames Cell Events: 5869 mean_circ: 0.950267
Ran for 227050 frames Cell Events: 5880 mean_circ: 0.950262
Ran for 227550 frames Cell Events: 5894 mean_circ: 0.950259
Ran for 228050 frames Cell Events: 5922 mean_circ: 0.950312
Ran for 229050 frames Cell Events: 5949 mean_circ: 0.950299
Ran for 230050 frames Cell Events: 5967 mean_circ: 0.950305
Ran for 230550 frames Cell Events: 5986 mean_circ: 0.950324
Ran for 231050 frames Cell Events: 5998 mean_circ: 0.950351
Ran for 231550 frames Cell Events: 6010 mean_circ: 0.950326
Ran for 232050 frames Cell Events: 6021 mean_circ: 0.950333
Ran for 232550 frames Cell Events: 6040 mean_circ: 0.950381
Ran for 233050 frames Cell Events: 6059 mean_circ: 0.950369
Ran for 233550 frames Cell Events: 6076 mean_circ: 0.950382
Ran for 234050 frames Cell Events: 6096 mean_circ: 0.950391
Ran for 235050 frames Cell Events: 6116 mean_circ: 0.950388
Ran for 235550 frames Cell Events: 6126 mean_circ: 0.950406
Ran for 236050 frames Cell Events: 6131 mean_circ: 0.950419
Ran for 237050 frames Cell Events: 6164 mean_circ: 0.950447
Ran for 237550 frames Cell Events: 6176 mean_circ: 0.950476
Ran for 238050 frames Cell Events: 6189 mean_circ: 0.95047
Ran for 238550 frames Cell Events: 6205 mean_circ: 0.950453
Ran for 239050 frames Cell Events: 6223 mean_circ: 0.950466
Ran for 239550 frames Cell Events: 6236 mean_circ: 0.950477
Ran for 240050 frames Cell Events: 6249 mean_circ: 0.950467
Ran for 240550 frames Cell Events: 6263 mean_circ: 0.950492
Ran for 241050 frames Cell Events: 6276 mean_circ: 0.950483
Ran for 241550 frames Cell Events: 6284 mean_circ: 0.950491
Ran for 242550 frames Cell Events: 6314 mean_circ: 0.950449
Ran for 243050 frames Cell Events: 6323 mean_circ: 0.950444
Ran for 244050 frames Cell Events: 6342 mean_circ: 0.950473
Ran for 244550 frames Cell Events: 6359 mean_circ: 0.950447
Ran for 245550 frames Cell Events: 6396 mean_circ: 0.950473
Ran for 246050 frames Cell Events: 6410 mean_circ: 0.950456
Ran for 247050 frames Cell Events: 6438 mean_circ: 0.950459
Ran for 247550 frames Cell Events: 6456 mean_circ: 0.950436
Ran for 248050 frames Cell Events: 6478 mean_circ: 0.950434
Ran for 248550 frames Cell Events: 6493 mean_circ: 0.950457
Ran for 249050 frames Cell Events: 6504 mean_circ: 0.95046
Ran for 249550 frames Cell Events: 6532 mean_circ: 0.950462
Ran for 250550 frames Cell Events: 6563 mean_circ: 0.950358
Ran for 251050 frames Cell Events: 6569 mean_circ: 0.95036
Ran for 252050 frames Cell Events: 6596 mean_circ: 0.950349
Ran for 254050 frames Cell Events: 6662 mean_circ: 0.950379
Ran for 254550 frames Cell Events: 6678 mean_circ: 0.950369
Ran for 255550 frames Cell Events: 6705 mean_circ: 0.950336
Ran for 256050 frames Cell Events: 6725 mean_circ: 0.950359
Ran for 256550 frames Cell Events: 6745 mean_circ: 0.950366
Ran for 257050 frames Cell Events: 6758 mean_circ: 0.950391
Ran for 257550 frames Cell Events: 6773 mean_circ: 0.950364
Ran for 258050 frames Cell Events: 6785 mean_circ: 0.950349
Ran for 259050 frames Cell Events: 6814 mean_circ: 0.950357
Ran for 260050 frames Cell Events: 6835 mean_circ: 0.950391
Ran for 261050 frames Cell Events: 6856 mean_circ: 0.950384
Ran for 261550 frames Cell Events: 6872 mean_circ: 0.9504
Ran for 262050 frames Cell Events: 6885 mean_circ: 0.95042
Ran for 262550 frames Cell Events: 6901 mean_circ: 0.950438
Ran for 263550 frames Cell Events: 6941 mean_circ: 0.950411
Ran for 264050 frames Cell Events: 6953 mean_circ: 0.950423
Ran for 264550 frames Cell Events: 6965 mean_circ: 0.95041
Ran for 265550 frames Cell Events: 6995 mean_circ: 0.950429
Ran for 267050 frames Cell Events: 7043 mean_circ: 0.950463
Ran for 267550 frames Cell Events: 7051 mean_circ: 0.950442
Ran for 268050 frames Cell Events: 7064 mean_circ: 0.950452
Ran for 268550 frames Cell Events: 7077 mean_circ: 0.950454
Ran for 269050 frames Cell Events: 7095 mean_circ: 0.950443
Ran for 270050 frames Cell Events: 7125 mean_circ: 0.950436
Ran for 270550 frames Cell Events: 7143 mean_circ: 0.950386
Ran for 271050 frames Cell Events: 7151 mean_circ: 0.950376
Ran for 271550 frames Cell Events: 7170 mean_circ: 0.9504
Ran for 272050 frames Cell Events: 7184 mean_circ: 0.950412
Ran for 272550 frames Cell Events: 7197 mean_circ: 0.950438
Ran for 273050 frames Cell Events: 7211 mean_circ: 0.950456
Ran for 273550 frames Cell Events: 7218 mean_circ: 0.950456
Ran for 274050 frames Cell Events: 7233 mean_circ: 0.950461
Ran for 274550 frames Cell Events: 7254 mean_circ: 0.95049
Ran for 275050 frames Cell Events: 7265 mean_circ: 0.950488
Ran for 275550 frames Cell Events: 7275 mean_circ: 0.950486
Ran for 276050 frames Cell Events: 7287 mean_circ: 0.950458
Ran for 276550 frames Cell Events: 7303 mean_circ: 0.950454
Ran for 277050 frames Cell Events: 7315 mean_circ: 0.950451
Ran for 277550 frames Cell Events: 7329 mean_circ: 0.950458
Ran for 278550 frames Cell Events: 7361 mean_circ: 0.95049
Ran for 279550 frames Cell Events: 7391 mean_circ: 0.950501
Ran for 280550 frames Cell Events: 7421 mean_circ: 0.950545
Ran for 281050 frames Cell Events: 7427 mean_circ: 0.950563
Ran for 282550 frames Cell Events: 7460 mean_circ: 0.9506
Ran for 283050 frames Cell Events: 7474 mean_circ: 0.950599
Ran for 284550 frames Cell Events: 7511 mean_circ: 0.950513
Ran for 285050 frames Cell Events: 7525 mean_circ: 0.950494
Ran for 285550 frames Cell Events: 7534 mean_circ: 0.95049
Ran for 286050 frames Cell Events: 7548 mean_circ: 0.950492
Ran for 286550 frames Cell Events: 7561 mean_circ: 0.950477
Ran for 287050 frames Cell Events: 7582 mean_circ: 0.950471
Ran for 287550 frames Cell Events: 7596 mean_circ: 0.950481
Ran for 288550 frames Cell Events: 7617 mean_circ: 0.950514
Ran for 289050 frames Cell Events: 7633 mean_circ: 0.950516
Ran for 289550 frames Cell Events: 7657 mean_circ: 0.950503
Ran for 290050 frames Cell Events: 7680 mean_circ: 0.950509
Ran for 291550 frames Cell Events: 7726 mean_circ: 0.950489
Ran for 292050 frames Cell Events: 7743 mean_circ: 0.950503
Ran for 292550 frames Cell Events: 7756 mean_circ: 0.950518
Ran for 293050 frames Cell Events: 7766 mean_circ: 0.950524
Ran for 293550 frames Cell Events: 7777 mean_circ: 0.950522
Ran for 294050 frames Cell Events: 7796 mean_circ: 0.950511
Ran for 294550 frames Cell Events: 7807 mean_circ: 0.95053
Ran for 295050 frames Cell Events: 7814 mean_circ: 0.950522
Ran for 295550 frames Cell Events: 7827 mean_circ: 0.950513
Ran for 296050 frames Cell Events: 7842 mean_circ: 0.950506
Ran for 296550 frames Cell Events: 7861 mean_circ: 0.950535
Ran for 298050 frames Cell Events: 7898 mean_circ: 0.950567
Ran for 298550 frames Cell Events: 7912 mean_circ: 0.950532
Ran for 299050 frames Cell Events: 7920 mean_circ: 0.950528
Ran for 299550 frames Cell Events: 7927 mean_circ: 0.950509
Ran for 300050 frames Cell Events: 7942 mean_circ: 0.950513
Ran for 302050 frames Cell Events: 7997 mean_circ: 0.950488
Ran for 302550 frames Cell Events: 8012 mean_circ: 0.950448
Ran for 303050 frames Cell Events: 8017 mean_circ: 0.950435
Ran for 303550 frames Cell Events: 8028 mean_circ: 0.950435
Ran for 304050 frames Cell Events: 8047 mean_circ: 0.950414
Ran for 305550 frames Cell Events: 8082 mean_circ: 0.950439
Ran for 306550 frames Cell Events: 8108 mean_circ: 0.95043
Ran for 307050 frames Cell Events: 8122 mean_circ: 0.950417
Ran for 307550 frames Cell Events: 8130 mean_circ: 0.950398
Ran for 308550 frames Cell Events: 8159 mean_circ: 0.950412
Ran for 309050 frames Cell Events: 8178 mean_circ: 0.950396
Ran for 309550 frames Cell Events: 8187 mean_circ: 0.950373
Ran for 310050 frames Cell Events: 8196 mean_circ: 0.950373
Ran for 310550 frames Cell Events: 8208 mean_circ: 0.950366
Ran for 311050 frames Cell Events: 8221 mean_circ: 0.950341
Ran for 311550 frames Cell Events: 8241 mean_circ: 0.950356
Ran for 312050 frames Cell Events: 8258 mean_circ: 0.950355
Ran for 312550 frames Cell Events: 8276 mean_circ: 0.950331
Ran for 314050 frames Cell Events: 8325 mean_circ: 0.950296
Ran for 315050 frames Cell Events: 8359 mean_circ: 0.950303
Ran for 316050 frames Cell Events: 8397 mean_circ: 0.950199
Ran for 316550 frames Cell Events: 8414 mean_circ: 0.950212
Ran for 317050 frames Cell Events: 8428 mean_circ: 0.950216
Ran for 317550 frames Cell Events: 8442 mean_circ: 0.950209
End this measurment..
Stopping time: 2.09154e+009
****************************************
Measurement finished
Mean Circularitiy: 0.950214
Mean Area: 634.363
Mean FL-1 intensity: 4280.7
Mean FL-2 intensity: 5575.65
Mean FL-3 intensity: 0
frames processed: 315798
Total Time: 159041ms
Number of Runs (new bg img) 0
Frames collected: 317967
Skipped frames: 8425
Rescued Frames: 324522
Samples DAQ: 79491847
Samples written: 158983444
Samples per Channel: 79491722
FPS: 1999.28
Samples per second: 499820
Expected samples/s: 500000
Events: 8455
Events per second: 53.1625
jumped back (PMT): 5457
#Frames read, frequency
# 0 frames :428764
# 1 frames :186562
# 2 frames :6018
# 3 frames :2294
# 4 frames :1140
# 5 frames :524
# 6 frames :1861
# 7 frames :2424
# 8 frames :1336
# 9 frames :760
# 10 frames :1052
# 11 frames :736
# 12 frames :574
# 13 frames :326
# 14 frames :255
# 15 frames :184
# 16 frames :195
# 17 frames :140
# 18 frames :132
# 19 frames :94
# 20 frames :92
# 21 frames :109
# 22 frames :74
# 23 frames :62
# 24 frames :33
# 25 frames :23
# 26 frames :17
# 27 frames :13
# 28 frames :15
# 29 frames :12
# 30 frames :9
# 31 frames :7
# 32 frames :5
# 33 frames :6
# 34 frames :6
# 35 frames :2
# 36 frames :4
# 37 frames :2
# 38 frames :1
# 39 frames :1
# 40 frames :2
# 45 frames :2
# 47 frames :1
# 52 frames :1
M1_para.ini
[General]
Measurement Number = 1
Flow Rate [ul/s] = 0.04
Region = "Channel"
Channel width = 20
Current LED = 100
[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 6
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0
#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 24.6802
parameters.txt
#fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 6
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 300
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0