Click on the log titles below to expand the log entries present in this DC resource.
dclab-export_2024-07-10_16.46.49
{"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc
{
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "a7304414004f4768f4a5e3b2eea19439",
"name": "M1_20170612_1716_dsRNA_T8_col.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "14:47:14"
}
}
dclab-tdms2rtdc-warnings
LimitingExportSizeWarning
in dclab.rtdc_dataset.export line 305:
Not all features have the same length! Limiting output event count to 10001 (max 10002) in
'10001'.
FG_Config.mcf
[Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;
[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;
[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini
[Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6
[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini
[EVENT LOG] fRT-DC V1.06170206
Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 24.6172
Start pulse train for BG Aquisition..
Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 2.45118e+009
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 1050 frames Cell Events: 40 mean_circ: 0.954947
Ran for 3050 frames Cell Events: 114 mean_circ: 0.948588
Ran for 3550 frames Cell Events: 126 mean_circ: 0.949349
Ran for 5050 frames Cell Events: 166 mean_circ: 0.949765
Ran for 5550 frames Cell Events: 183 mean_circ: 0.948776
Ran for 6550 frames Cell Events: 219 mean_circ: 0.948356
Ran for 7550 frames Cell Events: 270 mean_circ: 0.946029
Ran for 8050 frames Cell Events: 288 mean_circ: 0.945836
Ran for 9550 frames Cell Events: 344 mean_circ: 0.947033
Ran for 10050 frames Cell Events: 363 mean_circ: 0.947342
Ran for 11050 frames Cell Events: 402 mean_circ: 0.947109
Ran for 11550 frames Cell Events: 411 mean_circ: 0.94716
Ran for 12050 frames Cell Events: 431 mean_circ: 0.946869
Ran for 12550 frames Cell Events: 452 mean_circ: 0.947568
Ran for 14050 frames Cell Events: 520 mean_circ: 0.947864
Ran for 14550 frames Cell Events: 533 mean_circ: 0.948266
Ran for 15550 frames Cell Events: 557 mean_circ: 0.947971
Ran for 16050 frames Cell Events: 573 mean_circ: 0.947956
Ran for 17050 frames Cell Events: 602 mean_circ: 0.947877
Ran for 17550 frames Cell Events: 611 mean_circ: 0.947869
Ran for 18550 frames Cell Events: 649 mean_circ: 0.947952
Ran for 19550 frames Cell Events: 675 mean_circ: 0.947759
Ran for 20050 frames Cell Events: 696 mean_circ: 0.947777
Ran for 20550 frames Cell Events: 711 mean_circ: 0.947811
Ran for 23050 frames Cell Events: 792 mean_circ: 0.947132
Ran for 25550 frames Cell Events: 897 mean_circ: 0.946978
Ran for 26050 frames Cell Events: 906 mean_circ: 0.946745
Ran for 26550 frames Cell Events: 929 mean_circ: 0.946837
Ran for 27550 frames Cell Events: 967 mean_circ: 0.946203
Ran for 28050 frames Cell Events: 979 mean_circ: 0.94616
Ran for 28550 frames Cell Events: 1001 mean_circ: 0.946252
Ran for 29550 frames Cell Events: 1029 mean_circ: 0.946296
Ran for 30050 frames Cell Events: 1049 mean_circ: 0.946431
Ran for 30550 frames Cell Events: 1068 mean_circ: 0.946405
Ran for 31050 frames Cell Events: 1080 mean_circ: 0.946283
Ran for 32050 frames Cell Events: 1103 mean_circ: 0.946194
Ran for 32550 frames Cell Events: 1114 mean_circ: 0.946115
Ran for 33050 frames Cell Events: 1134 mean_circ: 0.946079
Ran for 34050 frames Cell Events: 1173 mean_circ: 0.945769
Ran for 34550 frames Cell Events: 1191 mean_circ: 0.945825
Ran for 35050 frames Cell Events: 1205 mean_circ: 0.945931
Ran for 35550 frames Cell Events: 1222 mean_circ: 0.946029
Ran for 36050 frames Cell Events: 1231 mean_circ: 0.94587
Ran for 38050 frames Cell Events: 1299 mean_circ: 0.945455
Ran for 39050 frames Cell Events: 1335 mean_circ: 0.94529
Ran for 39550 frames Cell Events: 1344 mean_circ: 0.945379
Ran for 40050 frames Cell Events: 1363 mean_circ: 0.945342
Ran for 41050 frames Cell Events: 1398 mean_circ: 0.945516
Ran for 41550 frames Cell Events: 1415 mean_circ: 0.945399
Ran for 42050 frames Cell Events: 1436 mean_circ: 0.945297
Ran for 42550 frames Cell Events: 1443 mean_circ: 0.945186
Ran for 43550 frames Cell Events: 1496 mean_circ: 0.945245
Ran for 44550 frames Cell Events: 1543 mean_circ: 0.945251
Ran for 45050 frames Cell Events: 1570 mean_circ: 0.945398
Ran for 45550 frames Cell Events: 1587 mean_circ: 0.945249
Ran for 46550 frames Cell Events: 1617 mean_circ: 0.945348
Ran for 47050 frames Cell Events: 1638 mean_circ: 0.945249
Ran for 47550 frames Cell Events: 1647 mean_circ: 0.945341
Ran for 49050 frames Cell Events: 1736 mean_circ: 0.945607
Ran for 49550 frames Cell Events: 1756 mean_circ: 0.945699
Ran for 50550 frames Cell Events: 1801 mean_circ: 0.945768
Ran for 51050 frames Cell Events: 1813 mean_circ: 0.945836
Ran for 52550 frames Cell Events: 1876 mean_circ: 0.94585
Ran for 54050 frames Cell Events: 1941 mean_circ: 0.945783
Ran for 54550 frames Cell Events: 1959 mean_circ: 0.94582
Ran for 55550 frames Cell Events: 1991 mean_circ: 0.945793
Ran for 56050 frames Cell Events: 2004 mean_circ: 0.945707
Ran for 57550 frames Cell Events: 2067 mean_circ: 0.94574
Ran for 58050 frames Cell Events: 2082 mean_circ: 0.945726
Ran for 59050 frames Cell Events: 2108 mean_circ: 0.945862
Ran for 59550 frames Cell Events: 2132 mean_circ: 0.945957
Ran for 60550 frames Cell Events: 2165 mean_circ: 0.945834
Ran for 61550 frames Cell Events: 2198 mean_circ: 0.945747
Ran for 62550 frames Cell Events: 2231 mean_circ: 0.945811
Ran for 64550 frames Cell Events: 2307 mean_circ: 0.945857
Ran for 66550 frames Cell Events: 2382 mean_circ: 0.945829
Ran for 67050 frames Cell Events: 2404 mean_circ: 0.945864
Ran for 67550 frames Cell Events: 2419 mean_circ: 0.945777
Ran for 68550 frames Cell Events: 2455 mean_circ: 0.945856
Ran for 69050 frames Cell Events: 2465 mean_circ: 0.945835
Ran for 69550 frames Cell Events: 2472 mean_circ: 0.945909
Ran for 70050 frames Cell Events: 2499 mean_circ: 0.945909
Ran for 71050 frames Cell Events: 2550 mean_circ: 0.94592
Ran for 71550 frames Cell Events: 2564 mean_circ: 0.945944
Ran for 72050 frames Cell Events: 2577 mean_circ: 0.946014
Ran for 73550 frames Cell Events: 2620 mean_circ: 0.945958
Ran for 74050 frames Cell Events: 2632 mean_circ: 0.945993
Ran for 74550 frames Cell Events: 2664 mean_circ: 0.946111
Ran for 77550 frames Cell Events: 2767 mean_circ: 0.945564
Ran for 78050 frames Cell Events: 2778 mean_circ: 0.945614
Ran for 78550 frames Cell Events: 2796 mean_circ: 0.945578
Ran for 80050 frames Cell Events: 2863 mean_circ: 0.945338
Ran for 80550 frames Cell Events: 2882 mean_circ: 0.945397
Ran for 81050 frames Cell Events: 2901 mean_circ: 0.945478
Ran for 81550 frames Cell Events: 2921 mean_circ: 0.945513
Ran for 82050 frames Cell Events: 2938 mean_circ: 0.94556
Ran for 83050 frames Cell Events: 2980 mean_circ: 0.945541
Ran for 83550 frames Cell Events: 2998 mean_circ: 0.945465
Ran for 84550 frames Cell Events: 3033 mean_circ: 0.945428
Ran for 85050 frames Cell Events: 3044 mean_circ: 0.945437
Ran for 85550 frames Cell Events: 3064 mean_circ: 0.945304
Ran for 86550 frames Cell Events: 3100 mean_circ: 0.945337
Ran for 87050 frames Cell Events: 3117 mean_circ: 0.945365
Ran for 87550 frames Cell Events: 3128 mean_circ: 0.945381
Ran for 88050 frames Cell Events: 3144 mean_circ: 0.945263
Ran for 88550 frames Cell Events: 3169 mean_circ: 0.945248
Ran for 89550 frames Cell Events: 3203 mean_circ: 0.945217
Ran for 90550 frames Cell Events: 3236 mean_circ: 0.945245
Ran for 91050 frames Cell Events: 3252 mean_circ: 0.945337
Ran for 92050 frames Cell Events: 3285 mean_circ: 0.94546
Ran for 92550 frames Cell Events: 3311 mean_circ: 0.945479
Ran for 93050 frames Cell Events: 3331 mean_circ: 0.945376
Ran for 94550 frames Cell Events: 3386 mean_circ: 0.945357
Ran for 95050 frames Cell Events: 3405 mean_circ: 0.945422
Ran for 96050 frames Cell Events: 3436 mean_circ: 0.945344
Ran for 96550 frames Cell Events: 3452 mean_circ: 0.945367
Ran for 97050 frames Cell Events: 3472 mean_circ: 0.945373
Ran for 98550 frames Cell Events: 3544 mean_circ: 0.945383
Ran for 100050 frames Cell Events: 3598 mean_circ: 0.945442
Ran for 100550 frames Cell Events: 3606 mean_circ: 0.945482
Ran for 101050 frames Cell Events: 3617 mean_circ: 0.945472
Ran for 101550 frames Cell Events: 3634 mean_circ: 0.945508
Ran for 102050 frames Cell Events: 3656 mean_circ: 0.945574
Ran for 106050 frames Cell Events: 3813 mean_circ: 0.945769
Ran for 106550 frames Cell Events: 3832 mean_circ: 0.945809
Ran for 107050 frames Cell Events: 3845 mean_circ: 0.945792
Ran for 107550 frames Cell Events: 3872 mean_circ: 0.945875
Ran for 108050 frames Cell Events: 3880 mean_circ: 0.945893
Ran for 109050 frames Cell Events: 3910 mean_circ: 0.945868
Ran for 109550 frames Cell Events: 3924 mean_circ: 0.945895
Ran for 110050 frames Cell Events: 3941 mean_circ: 0.945858
Ran for 110550 frames Cell Events: 3957 mean_circ: 0.945829
Ran for 111050 frames Cell Events: 3987 mean_circ: 0.945882
Ran for 112050 frames Cell Events: 4021 mean_circ: 0.94592
Ran for 113050 frames Cell Events: 4072 mean_circ: 0.945892
Ran for 113550 frames Cell Events: 4089 mean_circ: 0.945929
Ran for 114050 frames Cell Events: 4110 mean_circ: 0.945924
Ran for 114550 frames Cell Events: 4131 mean_circ: 0.945859
Ran for 116550 frames Cell Events: 4187 mean_circ: 0.946027
Ran for 117050 frames Cell Events: 4213 mean_circ: 0.946007
Ran for 117550 frames Cell Events: 4228 mean_circ: 0.94602
Ran for 118050 frames Cell Events: 4251 mean_circ: 0.94607
Ran for 118550 frames Cell Events: 4262 mean_circ: 0.946056
Ran for 119050 frames Cell Events: 4280 mean_circ: 0.94607
Ran for 119550 frames Cell Events: 4297 mean_circ: 0.946064
Ran for 120050 frames Cell Events: 4309 mean_circ: 0.946053
Ran for 120550 frames Cell Events: 4322 mean_circ: 0.94606
Ran for 121050 frames Cell Events: 4336 mean_circ: 0.945994
Ran for 122050 frames Cell Events: 4360 mean_circ: 0.946033
Ran for 122550 frames Cell Events: 4377 mean_circ: 0.946076
Ran for 123050 frames Cell Events: 4387 mean_circ: 0.94609
Ran for 123550 frames Cell Events: 4417 mean_circ: 0.94609
Ran for 124050 frames Cell Events: 4429 mean_circ: 0.946063
Ran for 124550 frames Cell Events: 4449 mean_circ: 0.946121
Ran for 125050 frames Cell Events: 4466 mean_circ: 0.946048
Ran for 125550 frames Cell Events: 4489 mean_circ: 0.946069
Ran for 126050 frames Cell Events: 4503 mean_circ: 0.946064
Ran for 126550 frames Cell Events: 4524 mean_circ: 0.946103
Ran for 127050 frames Cell Events: 4535 mean_circ: 0.946124
Ran for 127550 frames Cell Events: 4554 mean_circ: 0.946061
Ran for 128550 frames Cell Events: 4584 mean_circ: 0.946105
Ran for 129050 frames Cell Events: 4591 mean_circ: 0.946122
Ran for 129550 frames Cell Events: 4607 mean_circ: 0.946111
Ran for 130050 frames Cell Events: 4622 mean_circ: 0.946074
Ran for 130550 frames Cell Events: 4627 mean_circ: 0.946058
Ran for 131050 frames Cell Events: 4641 mean_circ: 0.946054
Ran for 131550 frames Cell Events: 4657 mean_circ: 0.94606
Ran for 132550 frames Cell Events: 4691 mean_circ: 0.946091
Ran for 134050 frames Cell Events: 4741 mean_circ: 0.946134
Ran for 134550 frames Cell Events: 4755 mean_circ: 0.946124
Ran for 135050 frames Cell Events: 4769 mean_circ: 0.946134
Ran for 137050 frames Cell Events: 4836 mean_circ: 0.946055
Ran for 137550 frames Cell Events: 4850 mean_circ: 0.946086
Ran for 138050 frames Cell Events: 4877 mean_circ: 0.946108
Ran for 138550 frames Cell Events: 4889 mean_circ: 0.94613
Ran for 140050 frames Cell Events: 4945 mean_circ: 0.946139
Ran for 141050 frames Cell Events: 4980 mean_circ: 0.946121
Ran for 141550 frames Cell Events: 5006 mean_circ: 0.946136
Ran for 142550 frames Cell Events: 5040 mean_circ: 0.946194
Ran for 143550 frames Cell Events: 5094 mean_circ: 0.946153
Ran for 144050 frames Cell Events: 5105 mean_circ: 0.946194
Ran for 145550 frames Cell Events: 5160 mean_circ: 0.946202
Ran for 146050 frames Cell Events: 5186 mean_circ: 0.946259
Ran for 146550 frames Cell Events: 5207 mean_circ: 0.946287
Ran for 148050 frames Cell Events: 5255 mean_circ: 0.946289
Ran for 149050 frames Cell Events: 5291 mean_circ: 0.946248
Ran for 152050 frames Cell Events: 5397 mean_circ: 0.946283
Ran for 152550 frames Cell Events: 5419 mean_circ: 0.946308
Ran for 153050 frames Cell Events: 5439 mean_circ: 0.946342
Ran for 154050 frames Cell Events: 5484 mean_circ: 0.946375
Ran for 154550 frames Cell Events: 5516 mean_circ: 0.946402
Ran for 155550 frames Cell Events: 5552 mean_circ: 0.946386
Ran for 156550 frames Cell Events: 5594 mean_circ: 0.946323
Ran for 157050 frames Cell Events: 5612 mean_circ: 0.946301
Ran for 157550 frames Cell Events: 5623 mean_circ: 0.946298
Ran for 158050 frames Cell Events: 5644 mean_circ: 0.946328
Ran for 159550 frames Cell Events: 5698 mean_circ: 0.946423
Ran for 162550 frames Cell Events: 5829 mean_circ: 0.946375
Ran for 163050 frames Cell Events: 5844 mean_circ: 0.946321
Ran for 164050 frames Cell Events: 5874 mean_circ: 0.946311
Ran for 164550 frames Cell Events: 5884 mean_circ: 0.946342
Ran for 165050 frames Cell Events: 5897 mean_circ: 0.946375
Ran for 165550 frames Cell Events: 5927 mean_circ: 0.94638
Ran for 166550 frames Cell Events: 5969 mean_circ: 0.946323
Ran for 167050 frames Cell Events: 5987 mean_circ: 0.946359
Ran for 167550 frames Cell Events: 6001 mean_circ: 0.946366
Ran for 168050 frames Cell Events: 6020 mean_circ: 0.946391
Ran for 168550 frames Cell Events: 6037 mean_circ: 0.946396
Ran for 169550 frames Cell Events: 6067 mean_circ: 0.946402
Ran for 170050 frames Cell Events: 6083 mean_circ: 0.946416
Ran for 171550 frames Cell Events: 6135 mean_circ: 0.946518
Ran for 173050 frames Cell Events: 6196 mean_circ: 0.946551
Ran for 173550 frames Cell Events: 6210 mean_circ: 0.946589
Ran for 174050 frames Cell Events: 6226 mean_circ: 0.946572
Ran for 175050 frames Cell Events: 6264 mean_circ: 0.946577
Ran for 176550 frames Cell Events: 6332 mean_circ: 0.946567
Ran for 177050 frames Cell Events: 6351 mean_circ: 0.946561
Ran for 178050 frames Cell Events: 6387 mean_circ: 0.946522
Ran for 179050 frames Cell Events: 6425 mean_circ: 0.946569
Ran for 179550 frames Cell Events: 6437 mean_circ: 0.946566
Ran for 180050 frames Cell Events: 6452 mean_circ: 0.946608
Ran for 181050 frames Cell Events: 6497 mean_circ: 0.946589
Ran for 182050 frames Cell Events: 6527 mean_circ: 0.946543
Ran for 182550 frames Cell Events: 6548 mean_circ: 0.946529
Ran for 184050 frames Cell Events: 6621 mean_circ: 0.946526
Ran for 185550 frames Cell Events: 6680 mean_circ: 0.946592
Ran for 186050 frames Cell Events: 6689 mean_circ: 0.946607
Ran for 186550 frames Cell Events: 6704 mean_circ: 0.946616
Ran for 187050 frames Cell Events: 6723 mean_circ: 0.946602
Ran for 187550 frames Cell Events: 6743 mean_circ: 0.946628
Ran for 188050 frames Cell Events: 6768 mean_circ: 0.946628
Ran for 188550 frames Cell Events: 6790 mean_circ: 0.946636
Ran for 189050 frames Cell Events: 6804 mean_circ: 0.946584
Ran for 189550 frames Cell Events: 6830 mean_circ: 0.946567
Ran for 190550 frames Cell Events: 6879 mean_circ: 0.946496
Ran for 191550 frames Cell Events: 6904 mean_circ: 0.946517
Ran for 192050 frames Cell Events: 6930 mean_circ: 0.946476
Ran for 192550 frames Cell Events: 6950 mean_circ: 0.946475
Ran for 193050 frames Cell Events: 6962 mean_circ: 0.946448
Ran for 194050 frames Cell Events: 6980 mean_circ: 0.946433
Ran for 194550 frames Cell Events: 7001 mean_circ: 0.946477
Ran for 195050 frames Cell Events: 7015 mean_circ: 0.946462
Ran for 196050 frames Cell Events: 7047 mean_circ: 0.946448
Ran for 196550 frames Cell Events: 7057 mean_circ: 0.946461
Ran for 197050 frames Cell Events: 7083 mean_circ: 0.946499
Ran for 197550 frames Cell Events: 7098 mean_circ: 0.9465
Ran for 198050 frames Cell Events: 7114 mean_circ: 0.946501
Ran for 200050 frames Cell Events: 7211 mean_circ: 0.946579
Ran for 200550 frames Cell Events: 7228 mean_circ: 0.946576
Ran for 201550 frames Cell Events: 7274 mean_circ: 0.946602
Ran for 202550 frames Cell Events: 7303 mean_circ: 0.94663
Ran for 203050 frames Cell Events: 7328 mean_circ: 0.946651
Ran for 204550 frames Cell Events: 7390 mean_circ: 0.94661
Ran for 205050 frames Cell Events: 7410 mean_circ: 0.946568
Ran for 205550 frames Cell Events: 7437 mean_circ: 0.946557
Ran for 206050 frames Cell Events: 7453 mean_circ: 0.946565
Ran for 206550 frames Cell Events: 7472 mean_circ: 0.94659
Ran for 207550 frames Cell Events: 7515 mean_circ: 0.946617
Ran for 208050 frames Cell Events: 7532 mean_circ: 0.946641
Ran for 209050 frames Cell Events: 7576 mean_circ: 0.946649
Ran for 209550 frames Cell Events: 7598 mean_circ: 0.946623
Ran for 211550 frames Cell Events: 7685 mean_circ: 0.946578
Ran for 212050 frames Cell Events: 7711 mean_circ: 0.946548
Ran for 212550 frames Cell Events: 7737 mean_circ: 0.946525
Ran for 213050 frames Cell Events: 7758 mean_circ: 0.946524
Ran for 213550 frames Cell Events: 7788 mean_circ: 0.946546
Ran for 214050 frames Cell Events: 7809 mean_circ: 0.946544
Ran for 215050 frames Cell Events: 7860 mean_circ: 0.946533
Ran for 215550 frames Cell Events: 7893 mean_circ: 0.946517
Ran for 216050 frames Cell Events: 7905 mean_circ: 0.94655
Ran for 216550 frames Cell Events: 7923 mean_circ: 0.94654
Ran for 217050 frames Cell Events: 7944 mean_circ: 0.946567
Ran for 218050 frames Cell Events: 8010 mean_circ: 0.946579
Ran for 220050 frames Cell Events: 8091 mean_circ: 0.946569
Ran for 221050 frames Cell Events: 8127 mean_circ: 0.946617
Ran for 221550 frames Cell Events: 8143 mean_circ: 0.946635
Ran for 222050 frames Cell Events: 8164 mean_circ: 0.946639
Ran for 223550 frames Cell Events: 8226 mean_circ: 0.946587
Ran for 225050 frames Cell Events: 8291 mean_circ: 0.946548
Ran for 225550 frames Cell Events: 8307 mean_circ: 0.94656
Ran for 226550 frames Cell Events: 8337 mean_circ: 0.946576
Ran for 227550 frames Cell Events: 8375 mean_circ: 0.946555
Ran for 228050 frames Cell Events: 8391 mean_circ: 0.946569
Ran for 228550 frames Cell Events: 8407 mean_circ: 0.946565
Ran for 230550 frames Cell Events: 8488 mean_circ: 0.94655
Ran for 232050 frames Cell Events: 8544 mean_circ: 0.946582
Ran for 233050 frames Cell Events: 8576 mean_circ: 0.94659
Ran for 235050 frames Cell Events: 8654 mean_circ: 0.946515
Ran for 235550 frames Cell Events: 8675 mean_circ: 0.946506
Ran for 236550 frames Cell Events: 8701 mean_circ: 0.946521
Ran for 238050 frames Cell Events: 8760 mean_circ: 0.946512
Ran for 239050 frames Cell Events: 8802 mean_circ: 0.946513
Ran for 241550 frames Cell Events: 8886 mean_circ: 0.94655
Ran for 242050 frames Cell Events: 8895 mean_circ: 0.946564
Ran for 242550 frames Cell Events: 8916 mean_circ: 0.946595
Ran for 243550 frames Cell Events: 8951 mean_circ: 0.946632
Ran for 244050 frames Cell Events: 8975 mean_circ: 0.946631
Ran for 244550 frames Cell Events: 8988 mean_circ: 0.94663
Ran for 245550 frames Cell Events: 9024 mean_circ: 0.946641
Ran for 246550 frames Cell Events: 9056 mean_circ: 0.946618
Ran for 247050 frames Cell Events: 9069 mean_circ: 0.946644
Ran for 247550 frames Cell Events: 9086 mean_circ: 0.946636
Ran for 248050 frames Cell Events: 9096 mean_circ: 0.946643
Ran for 248550 frames Cell Events: 9110 mean_circ: 0.946648
Ran for 249050 frames Cell Events: 9124 mean_circ: 0.946657
Ran for 249550 frames Cell Events: 9136 mean_circ: 0.94665
Ran for 250050 frames Cell Events: 9156 mean_circ: 0.946642
Ran for 250550 frames Cell Events: 9172 mean_circ: 0.946651
Ran for 251050 frames Cell Events: 9189 mean_circ: 0.946653
Ran for 251550 frames Cell Events: 9204 mean_circ: 0.946667
Ran for 252050 frames Cell Events: 9220 mean_circ: 0.946654
Ran for 253050 frames Cell Events: 9264 mean_circ: 0.946652
Ran for 253550 frames Cell Events: 9282 mean_circ: 0.946651
Ran for 254550 frames Cell Events: 9331 mean_circ: 0.946646
Ran for 255550 frames Cell Events: 9369 mean_circ: 0.946651
Ran for 256050 frames Cell Events: 9380 mean_circ: 0.94666
Ran for 256550 frames Cell Events: 9396 mean_circ: 0.946657
Ran for 257050 frames Cell Events: 9412 mean_circ: 0.946641
Ran for 257550 frames Cell Events: 9425 mean_circ: 0.946625
Ran for 258550 frames Cell Events: 9464 mean_circ: 0.946589
Ran for 259550 frames Cell Events: 9491 mean_circ: 0.946608
Ran for 260050 frames Cell Events: 9506 mean_circ: 0.946596
Ran for 260550 frames Cell Events: 9524 mean_circ: 0.946614
Ran for 261050 frames Cell Events: 9559 mean_circ: 0.946614
Ran for 261550 frames Cell Events: 9578 mean_circ: 0.946654
Ran for 262050 frames Cell Events: 9593 mean_circ: 0.946666
Ran for 262550 frames Cell Events: 9616 mean_circ: 0.946672
Ran for 263050 frames Cell Events: 9627 mean_circ: 0.946645
Ran for 263550 frames Cell Events: 9637 mean_circ: 0.946641
Ran for 264050 frames Cell Events: 9647 mean_circ: 0.946638
Ran for 266050 frames Cell Events: 9736 mean_circ: 0.946672
Ran for 266550 frames Cell Events: 9756 mean_circ: 0.946662
Ran for 268050 frames Cell Events: 9811 mean_circ: 0.946638
Ran for 268550 frames Cell Events: 9819 mean_circ: 0.94664
Ran for 270550 frames Cell Events: 9917 mean_circ: 0.946595
Ran for 271050 frames Cell Events: 9929 mean_circ: 0.946572
Ran for 271550 frames Cell Events: 9949 mean_circ: 0.946531
Ran for 272050 frames Cell Events: 9973 mean_circ: 0.946549
End this measurment.
because stop condition (time/nr of cells) was met
Stopping time: 2.45132e+009
****************************************
Measurement finished
Mean Circularitiy: 0.946548
Mean Area: 650.285
Mean FL-1 intensity: 3154.86
Mean FL-2 intensity: 3723.01
Mean FL-3 intensity: 0
frames processed: 271745
Total Time: 136607ms
Number of Runs (new bg img) 0
Frames collected: 273038
Skipped frames: 11102
Rescued Frames: 1279757
Samples DAQ: 68263258
Samples written: 136518860
Samples per Channel: 68259430
FPS: 1998.71
Samples per second: 499677
Expected samples/s: 500000
Events: 10002
Events per second: 73.2173
jumped back (PMT): 5256
#Frames read, frequency
# 0 frames :402907
# 1 frames :122566
# 2 frames :5188
# 3 frames :2392
# 4 frames :1315
# 5 frames :705
# 6 frames :799
# 7 frames :2087
# 8 frames :1389
# 9 frames :1001
# 10 frames :978
# 11 frames :1024
# 12 frames :745
# 13 frames :487
# 14 frames :327
# 15 frames :286
# 16 frames :252
# 17 frames :222
# 18 frames :214
# 19 frames :169
# 20 frames :147
# 21 frames :104
# 22 frames :91
# 23 frames :78
# 24 frames :64
# 25 frames :49
# 26 frames :48
# 27 frames :39
# 28 frames :40
# 29 frames :36
# 30 frames :36
# 31 frames :17
# 32 frames :17
# 33 frames :22
# 34 frames :13
# 35 frames :13
# 36 frames :9
# 37 frames :9
# 38 frames :9
# 39 frames :7
# 40 frames :1
# 41 frames :9
# 42 frames :5
# 43 frames :7
# 44 frames :3
# 45 frames :8
# 46 frames :5
# 47 frames :5
# 48 frames :1
# 49 frames :1
# 50 frames :2
# 51 frames :4
# 52 frames :1
# 53 frames :2
# 54 frames :2
# 56 frames :2
# 58 frames :1
# 59 frames :1
# 60 frames :2
# 61 frames :1
# 62 frames :2
# 65 frames :1
# 66 frames :1
# 70 frames :1
# 88 frames :1
M1_para.ini
[General]
Measurement Number = 1
Flow Rate [ul/s] = 0.04
Region = "Channel"
Channel width = 20
Current LED = 100
[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 6
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0
#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 24.6172
parameters.txt
#fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 6
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 300
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0