Click on the log titles below to expand the log entries present in this DC resource.
dclab-export_2024-07-10_19.18.48
{"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc
{
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "6b0dadd20c35342f782b5bfce9018e2f",
"name": "M1_20170619_1543_dsRNA_U3_col.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "17:19:14"
}
}
dclab-tdms2rtdc-warnings
LimitingExportSizeWarning
in dclab.rtdc_dataset.export line 305:
Not all features have the same length! Limiting output event count to 10000 (max 10001) in
'10000'.
FG_Config.mcf
[Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;
[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;
[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini
[Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6
[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini
[EVENT LOG] fRT-DC V1.06170206
Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 25.0951
Start pulse train for BG Aquisition..
Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 4.77162e+008
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 550 frames Cell Events: 9 mean_circ: 0.894784
Ran for 2050 frames Cell Events: 56 mean_circ: 0.909348
Ran for 2550 frames Cell Events: 61 mean_circ: 0.911065
Ran for 3050 frames Cell Events: 72 mean_circ: 0.913229
Ran for 3550 frames Cell Events: 83 mean_circ: 0.919968
Ran for 4050 frames Cell Events: 100 mean_circ: 0.916197
Ran for 4550 frames Cell Events: 112 mean_circ: 0.915781
Ran for 5550 frames Cell Events: 144 mean_circ: 0.918478
Ran for 6050 frames Cell Events: 156 mean_circ: 0.915059
Ran for 6550 frames Cell Events: 167 mean_circ: 0.916068
Ran for 7050 frames Cell Events: 174 mean_circ: 0.915891
Ran for 7550 frames Cell Events: 184 mean_circ: 0.915454
Ran for 8550 frames Cell Events: 214 mean_circ: 0.914553
Ran for 9050 frames Cell Events: 220 mean_circ: 0.915375
Ran for 9550 frames Cell Events: 230 mean_circ: 0.915623
Ran for 10050 frames Cell Events: 241 mean_circ: 0.915422
Ran for 10550 frames Cell Events: 254 mean_circ: 0.915476
Ran for 11050 frames Cell Events: 267 mean_circ: 0.91516
Ran for 11550 frames Cell Events: 277 mean_circ: 0.915165
Ran for 12050 frames Cell Events: 289 mean_circ: 0.914915
Ran for 12550 frames Cell Events: 302 mean_circ: 0.91526
Ran for 13050 frames Cell Events: 310 mean_circ: 0.916418
Ran for 13550 frames Cell Events: 320 mean_circ: 0.917085
Ran for 14550 frames Cell Events: 339 mean_circ: 0.917109
Ran for 15550 frames Cell Events: 359 mean_circ: 0.917808
Ran for 16050 frames Cell Events: 378 mean_circ: 0.917284
Ran for 16550 frames Cell Events: 386 mean_circ: 0.917934
Ran for 17050 frames Cell Events: 408 mean_circ: 0.918575
Ran for 17550 frames Cell Events: 416 mean_circ: 0.918695
Ran for 18550 frames Cell Events: 435 mean_circ: 0.918351
Ran for 19050 frames Cell Events: 445 mean_circ: 0.918229
Ran for 19550 frames Cell Events: 449 mean_circ: 0.918223
Ran for 20050 frames Cell Events: 457 mean_circ: 0.918059
Ran for 20550 frames Cell Events: 468 mean_circ: 0.918222
Ran for 21050 frames Cell Events: 485 mean_circ: 0.918391
Ran for 22550 frames Cell Events: 529 mean_circ: 0.917919
Ran for 23050 frames Cell Events: 541 mean_circ: 0.917849
Ran for 23550 frames Cell Events: 544 mean_circ: 0.91794
Ran for 24050 frames Cell Events: 551 mean_circ: 0.918046
Ran for 24550 frames Cell Events: 566 mean_circ: 0.918014
Ran for 25550 frames Cell Events: 588 mean_circ: 0.918248
Ran for 26550 frames Cell Events: 615 mean_circ: 0.918407
Ran for 27050 frames Cell Events: 626 mean_circ: 0.918569
Ran for 28050 frames Cell Events: 655 mean_circ: 0.918902
Ran for 28550 frames Cell Events: 669 mean_circ: 0.919171
Ran for 29050 frames Cell Events: 675 mean_circ: 0.919432
Ran for 29550 frames Cell Events: 693 mean_circ: 0.919819
Ran for 30550 frames Cell Events: 712 mean_circ: 0.920465
Ran for 31050 frames Cell Events: 724 mean_circ: 0.920708
Ran for 31550 frames Cell Events: 737 mean_circ: 0.920993
Ran for 32050 frames Cell Events: 743 mean_circ: 0.920912
Ran for 32550 frames Cell Events: 770 mean_circ: 0.921105
Ran for 33050 frames Cell Events: 777 mean_circ: 0.920957
Ran for 33550 frames Cell Events: 784 mean_circ: 0.920648
Ran for 34050 frames Cell Events: 814 mean_circ: 0.920773
Ran for 34550 frames Cell Events: 827 mean_circ: 0.920714
Ran for 35050 frames Cell Events: 840 mean_circ: 0.920828
Ran for 35550 frames Cell Events: 845 mean_circ: 0.920753
Ran for 36050 frames Cell Events: 857 mean_circ: 0.920696
Ran for 36550 frames Cell Events: 876 mean_circ: 0.920584
Ran for 37050 frames Cell Events: 886 mean_circ: 0.920803
Ran for 37550 frames Cell Events: 904 mean_circ: 0.921011
Ran for 38550 frames Cell Events: 925 mean_circ: 0.921389
Ran for 39050 frames Cell Events: 936 mean_circ: 0.92136
Ran for 39550 frames Cell Events: 948 mean_circ: 0.92149
Ran for 40050 frames Cell Events: 972 mean_circ: 0.921571
Ran for 40550 frames Cell Events: 979 mean_circ: 0.921665
Ran for 41050 frames Cell Events: 984 mean_circ: 0.921568
Ran for 42050 frames Cell Events: 1004 mean_circ: 0.921688
Ran for 42550 frames Cell Events: 1025 mean_circ: 0.921748
Ran for 43050 frames Cell Events: 1035 mean_circ: 0.921946
Ran for 43550 frames Cell Events: 1044 mean_circ: 0.922052
Ran for 44050 frames Cell Events: 1058 mean_circ: 0.922016
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Ran for 45550 frames Cell Events: 1085 mean_circ: 0.9219
Ran for 46050 frames Cell Events: 1097 mean_circ: 0.921604
Ran for 46550 frames Cell Events: 1111 mean_circ: 0.921451
Ran for 47050 frames Cell Events: 1120 mean_circ: 0.921147
Ran for 47550 frames Cell Events: 1134 mean_circ: 0.920868
Ran for 48550 frames Cell Events: 1148 mean_circ: 0.920949
Ran for 49050 frames Cell Events: 1157 mean_circ: 0.920982
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Ran for 50050 frames Cell Events: 1173 mean_circ: 0.921011
Ran for 50550 frames Cell Events: 1188 mean_circ: 0.921035
Ran for 51050 frames Cell Events: 1197 mean_circ: 0.9211
Ran for 51550 frames Cell Events: 1209 mean_circ: 0.921267
Ran for 52050 frames Cell Events: 1222 mean_circ: 0.921399
Ran for 52550 frames Cell Events: 1238 mean_circ: 0.921384
Ran for 53050 frames Cell Events: 1253 mean_circ: 0.921439
Ran for 53550 frames Cell Events: 1259 mean_circ: 0.921449
Ran for 54050 frames Cell Events: 1268 mean_circ: 0.921723
Ran for 54550 frames Cell Events: 1278 mean_circ: 0.921637
Ran for 55050 frames Cell Events: 1286 mean_circ: 0.921623
Ran for 56050 frames Cell Events: 1309 mean_circ: 0.921636
Ran for 57550 frames Cell Events: 1342 mean_circ: 0.921324
Ran for 58050 frames Cell Events: 1355 mean_circ: 0.921289
Ran for 58550 frames Cell Events: 1368 mean_circ: 0.921485
Ran for 59050 frames Cell Events: 1378 mean_circ: 0.921629
Ran for 59550 frames Cell Events: 1391 mean_circ: 0.921606
Ran for 60050 frames Cell Events: 1401 mean_circ: 0.921736
Ran for 60550 frames Cell Events: 1408 mean_circ: 0.921767
Ran for 61050 frames Cell Events: 1419 mean_circ: 0.92189
Ran for 61550 frames Cell Events: 1432 mean_circ: 0.922
Ran for 62050 frames Cell Events: 1444 mean_circ: 0.922002
Ran for 62550 frames Cell Events: 1457 mean_circ: 0.921794
Ran for 63550 frames Cell Events: 1484 mean_circ: 0.921841
Ran for 64050 frames Cell Events: 1498 mean_circ: 0.92188
Ran for 64550 frames Cell Events: 1507 mean_circ: 0.921882
Ran for 65050 frames Cell Events: 1521 mean_circ: 0.921891
Ran for 65550 frames Cell Events: 1531 mean_circ: 0.921649
Ran for 66050 frames Cell Events: 1539 mean_circ: 0.921696
Ran for 66550 frames Cell Events: 1552 mean_circ: 0.921848
Ran for 67050 frames Cell Events: 1560 mean_circ: 0.921894
Ran for 67550 frames Cell Events: 1569 mean_circ: 0.921886
Ran for 68050 frames Cell Events: 1587 mean_circ: 0.921902
Ran for 68550 frames Cell Events: 1595 mean_circ: 0.921863
Ran for 69050 frames Cell Events: 1607 mean_circ: 0.921737
Ran for 69550 frames Cell Events: 1617 mean_circ: 0.921711
Ran for 70050 frames Cell Events: 1625 mean_circ: 0.921673
Ran for 70550 frames Cell Events: 1639 mean_circ: 0.921719
Ran for 71050 frames Cell Events: 1649 mean_circ: 0.921678
Ran for 71550 frames Cell Events: 1658 mean_circ: 0.921736
Ran for 72050 frames Cell Events: 1672 mean_circ: 0.921791
Ran for 72550 frames Cell Events: 1688 mean_circ: 0.921804
Ran for 73050 frames Cell Events: 1698 mean_circ: 0.921672
Ran for 74050 frames Cell Events: 1732 mean_circ: 0.921562
Ran for 74550 frames Cell Events: 1744 mean_circ: 0.921583
Ran for 75050 frames Cell Events: 1753 mean_circ: 0.921591
Ran for 75550 frames Cell Events: 1761 mean_circ: 0.92132
Ran for 76550 frames Cell Events: 1791 mean_circ: 0.921327
Ran for 77050 frames Cell Events: 1805 mean_circ: 0.921541
Ran for 77550 frames Cell Events: 1818 mean_circ: 0.921482
Ran for 78050 frames Cell Events: 1829 mean_circ: 0.921531
Ran for 78550 frames Cell Events: 1837 mean_circ: 0.921442
Ran for 79050 frames Cell Events: 1859 mean_circ: 0.921299
Ran for 79550 frames Cell Events: 1868 mean_circ: 0.921347
Ran for 80050 frames Cell Events: 1882 mean_circ: 0.921212
Ran for 80550 frames Cell Events: 1889 mean_circ: 0.9212
Ran for 81050 frames Cell Events: 1895 mean_circ: 0.921154
Ran for 81550 frames Cell Events: 1903 mean_circ: 0.921111
Ran for 82050 frames Cell Events: 1920 mean_circ: 0.921153
Ran for 83050 frames Cell Events: 1939 mean_circ: 0.921189
Ran for 84050 frames Cell Events: 1964 mean_circ: 0.921409
Ran for 84550 frames Cell Events: 1975 mean_circ: 0.921436
Ran for 85050 frames Cell Events: 1984 mean_circ: 0.921497
Ran for 86550 frames Cell Events: 2008 mean_circ: 0.921493
Ran for 87550 frames Cell Events: 2021 mean_circ: 0.921469
Ran for 88050 frames Cell Events: 2039 mean_circ: 0.921438
Ran for 88550 frames Cell Events: 2049 mean_circ: 0.921269
Ran for 89050 frames Cell Events: 2063 mean_circ: 0.921313
Ran for 90550 frames Cell Events: 2095 mean_circ: 0.921346
Ran for 91050 frames Cell Events: 2107 mean_circ: 0.921252
Ran for 92050 frames Cell Events: 2138 mean_circ: 0.921045
Ran for 92550 frames Cell Events: 2154 mean_circ: 0.921014
Ran for 93550 frames Cell Events: 2184 mean_circ: 0.920881
Ran for 94050 frames Cell Events: 2194 mean_circ: 0.920699
Ran for 94550 frames Cell Events: 2202 mean_circ: 0.920599
Ran for 95050 frames Cell Events: 2209 mean_circ: 0.920566
Ran for 95550 frames Cell Events: 2214 mean_circ: 0.92063
Ran for 97050 frames Cell Events: 2253 mean_circ: 0.920718
Ran for 97550 frames Cell Events: 2268 mean_circ: 0.920777
Ran for 98050 frames Cell Events: 2278 mean_circ: 0.920709
Ran for 98550 frames Cell Events: 2292 mean_circ: 0.920701
Ran for 99050 frames Cell Events: 2299 mean_circ: 0.920716
Ran for 100050 frames Cell Events: 2333 mean_circ: 0.920682
Ran for 100550 frames Cell Events: 2346 mean_circ: 0.920743
Ran for 101550 frames Cell Events: 2372 mean_circ: 0.920668
Ran for 102050 frames Cell Events: 2392 mean_circ: 0.920714
Ran for 102550 frames Cell Events: 2402 mean_circ: 0.920448
Ran for 103050 frames Cell Events: 2417 mean_circ: 0.920508
Ran for 103550 frames Cell Events: 2436 mean_circ: 0.920292
Ran for 104550 frames Cell Events: 2458 mean_circ: 0.920432
Ran for 105550 frames Cell Events: 2476 mean_circ: 0.920422
Ran for 106050 frames Cell Events: 2486 mean_circ: 0.920493
Ran for 106550 frames Cell Events: 2497 mean_circ: 0.920441
Ran for 107550 frames Cell Events: 2522 mean_circ: 0.920459
Ran for 108050 frames Cell Events: 2535 mean_circ: 0.920452
Ran for 108550 frames Cell Events: 2540 mean_circ: 0.920382
Ran for 109050 frames Cell Events: 2550 mean_circ: 0.920452
Ran for 109550 frames Cell Events: 2560 mean_circ: 0.920468
Ran for 110550 frames Cell Events: 2585 mean_circ: 0.92048
Ran for 111050 frames Cell Events: 2594 mean_circ: 0.92049
Ran for 111550 frames Cell Events: 2605 mean_circ: 0.920435
Ran for 112050 frames Cell Events: 2618 mean_circ: 0.920207
Ran for 112550 frames Cell Events: 2628 mean_circ: 0.920207
Ran for 113050 frames Cell Events: 2635 mean_circ: 0.920154
Ran for 113550 frames Cell Events: 2653 mean_circ: 0.920195
Ran for 114050 frames Cell Events: 2659 mean_circ: 0.920256
Ran for 114550 frames Cell Events: 2676 mean_circ: 0.920256
Ran for 115050 frames Cell Events: 2685 mean_circ: 0.920306
Ran for 115550 frames Cell Events: 2693 mean_circ: 0.920358
Ran for 116050 frames Cell Events: 2714 mean_circ: 0.92029
Ran for 116550 frames Cell Events: 2726 mean_circ: 0.92032
Ran for 117050 frames Cell Events: 2740 mean_circ: 0.920282
Ran for 117550 frames Cell Events: 2752 mean_circ: 0.920206
Ran for 118550 frames Cell Events: 2774 mean_circ: 0.920213
Ran for 119550 frames Cell Events: 2792 mean_circ: 0.920277
Ran for 120050 frames Cell Events: 2803 mean_circ: 0.92027
Ran for 120550 frames Cell Events: 2811 mean_circ: 0.920286
Ran for 121050 frames Cell Events: 2816 mean_circ: 0.920318
Ran for 121550 frames Cell Events: 2828 mean_circ: 0.92035
Ran for 122550 frames Cell Events: 2845 mean_circ: 0.920345
Ran for 123050 frames Cell Events: 2853 mean_circ: 0.920356
Ran for 123550 frames Cell Events: 2860 mean_circ: 0.920368
Ran for 124050 frames Cell Events: 2867 mean_circ: 0.920294
Ran for 124550 frames Cell Events: 2880 mean_circ: 0.920262
Ran for 125050 frames Cell Events: 2892 mean_circ: 0.920344
Ran for 125550 frames Cell Events: 2906 mean_circ: 0.920407
Ran for 126050 frames Cell Events: 2911 mean_circ: 0.920381
Ran for 126550 frames Cell Events: 2916 mean_circ: 0.920402
Ran for 128050 frames Cell Events: 2953 mean_circ: 0.920587
Ran for 128550 frames Cell Events: 2967 mean_circ: 0.920549
Ran for 129050 frames Cell Events: 2982 mean_circ: 0.920483
Ran for 130050 frames Cell Events: 3002 mean_circ: 0.920508
Ran for 130550 frames Cell Events: 3013 mean_circ: 0.920499
Ran for 131050 frames Cell Events: 3029 mean_circ: 0.920489
Ran for 131550 frames Cell Events: 3042 mean_circ: 0.920551
Ran for 132050 frames Cell Events: 3056 mean_circ: 0.920597
Ran for 133050 frames Cell Events: 3080 mean_circ: 0.920652
Ran for 133550 frames Cell Events: 3093 mean_circ: 0.920707
Ran for 134050 frames Cell Events: 3105 mean_circ: 0.920554
Ran for 134550 frames Cell Events: 3123 mean_circ: 0.920577
Ran for 135050 frames Cell Events: 3147 mean_circ: 0.920571
Ran for 135550 frames Cell Events: 3159 mean_circ: 0.920665
Ran for 136050 frames Cell Events: 3170 mean_circ: 0.920707
Ran for 136550 frames Cell Events: 3183 mean_circ: 0.920733
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Ran for 138050 frames Cell Events: 3237 mean_circ: 0.920774
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Ran for 139550 frames Cell Events: 3268 mean_circ: 0.920823
Ran for 141050 frames Cell Events: 3337 mean_circ: 0.920913
Ran for 142050 frames Cell Events: 3368 mean_circ: 0.921221
Ran for 142550 frames Cell Events: 3383 mean_circ: 0.921262
Ran for 143550 frames Cell Events: 3416 mean_circ: 0.921301
Ran for 144050 frames Cell Events: 3434 mean_circ: 0.921169
Ran for 144550 frames Cell Events: 3444 mean_circ: 0.92112
Ran for 145050 frames Cell Events: 3454 mean_circ: 0.921076
Ran for 145550 frames Cell Events: 3464 mean_circ: 0.921114
Ran for 146050 frames Cell Events: 3471 mean_circ: 0.921194
Ran for 146550 frames Cell Events: 3475 mean_circ: 0.921217
Ran for 147050 frames Cell Events: 3486 mean_circ: 0.921186
Ran for 147550 frames Cell Events: 3496 mean_circ: 0.921169
Ran for 148550 frames Cell Events: 3519 mean_circ: 0.921287
Ran for 149050 frames Cell Events: 3534 mean_circ: 0.921244
Ran for 149550 frames Cell Events: 3547 mean_circ: 0.921241
Ran for 150050 frames Cell Events: 3554 mean_circ: 0.921249
Ran for 150550 frames Cell Events: 3570 mean_circ: 0.921294
Ran for 151050 frames Cell Events: 3579 mean_circ: 0.921248
Ran for 151550 frames Cell Events: 3595 mean_circ: 0.92122
Ran for 152550 frames Cell Events: 3617 mean_circ: 0.92115
Ran for 153050 frames Cell Events: 3627 mean_circ: 0.921155
Ran for 153550 frames Cell Events: 3636 mean_circ: 0.921142
Ran for 154050 frames Cell Events: 3653 mean_circ: 0.921133
Ran for 154550 frames Cell Events: 3668 mean_circ: 0.921
Ran for 156050 frames Cell Events: 3709 mean_circ: 0.920832
Ran for 157050 frames Cell Events: 3738 mean_circ: 0.920779
Ran for 157550 frames Cell Events: 3747 mean_circ: 0.920672
Ran for 158050 frames Cell Events: 3761 mean_circ: 0.920638
Ran for 158550 frames Cell Events: 3770 mean_circ: 0.920543
Ran for 159050 frames Cell Events: 3780 mean_circ: 0.920619
Ran for 159550 frames Cell Events: 3789 mean_circ: 0.920526
Ran for 160550 frames Cell Events: 3822 mean_circ: 0.920623
Ran for 161050 frames Cell Events: 3836 mean_circ: 0.920553
Ran for 161550 frames Cell Events: 3847 mean_circ: 0.920554
Ran for 162050 frames Cell Events: 3858 mean_circ: 0.920552
Ran for 162550 frames Cell Events: 3866 mean_circ: 0.920556
Ran for 163550 frames Cell Events: 3899 mean_circ: 0.920587
Ran for 164050 frames Cell Events: 3906 mean_circ: 0.920523
Ran for 164550 frames Cell Events: 3920 mean_circ: 0.920617
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Ran for 392550 frames Cell Events: 9787 mean_circ: 0.919771
Ran for 393050 frames Cell Events: 9797 mean_circ: 0.919769
Ran for 393550 frames Cell Events: 9809 mean_circ: 0.919776
Ran for 394050 frames Cell Events: 9823 mean_circ: 0.91978
Ran for 394550 frames Cell Events: 9845 mean_circ: 0.919758
Ran for 396050 frames Cell Events: 9883 mean_circ: 0.919745
Ran for 396550 frames Cell Events: 9893 mean_circ: 0.919739
Ran for 397050 frames Cell Events: 9904 mean_circ: 0.919699
Ran for 397550 frames Cell Events: 9918 mean_circ: 0.919694
Ran for 398050 frames Cell Events: 9931 mean_circ: 0.919725
Ran for 400050 frames Cell Events: 9996 mean_circ: 0.919705
End this measurment.
because stop condition (time/nr of cells) was met
Stopping time: 4.77363e+008
****************************************
Measurement finished
Mean Circularitiy: 0.919699
Mean Area: 645.751
Mean FL-1 intensity: 3520.43
Mean FL-2 intensity: 4010.47
Mean FL-3 intensity: 0
frames processed: 400079
Total Time: 200173ms
Number of Runs (new bg img) 0
Frames collected: 400152
Skipped frames: 7871
Rescued Frames: 1315924
Samples DAQ: 100038426
Samples written: 200075808
Samples per Channel: 100037904
FPS: 1999.03
Samples per second: 499757
Expected samples/s: 500000
Events: 10001
Events per second: 49.9618
jumped back (PMT): 8828
#Frames read, frequency
# 0 frames :520678
# 1 frames :252647
# 2 frames :8778
# 3 frames :3299
# 4 frames :1321
# 5 frames :2323
# 6 frames :3241
# 7 frames :1561
# 8 frames :733
# 9 frames :511
# 10 frames :2142
# 11 frames :1024
# 12 frames :570
# 13 frames :342
# 14 frames :246
# 15 frames :231
# 16 frames :170
# 17 frames :140
# 18 frames :100
# 19 frames :61
# 20 frames :39
# 21 frames :27
# 22 frames :15
# 23 frames :14
# 24 frames :5
# 25 frames :8
# 26 frames :6
# 27 frames :6
# 28 frames :5
# 29 frames :1
# 30 frames :6
# 31 frames :1
# 32 frames :1
# 33 frames :2
# 34 frames :1
# 35 frames :1
# 37 frames :1
# 38 frames :1
# 47 frames :1
# 73 frames :1
M1_para.ini
[General]
Measurement Number = 1
Flow Rate [ul/s] = 0.04
Region = "Channel"
Channel width = 20
Current LED = 100
[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 6
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0
#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 25.0951
parameters.txt
#fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 6
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 300
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0