Click on the log titles below to expand the log entries present in this DC resource.
dclab-export_2024-07-10_17.04.57
{"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc
{
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "954554d9b894d3fc6b144fc7d83ce428",
"name": "M1_20170613_1340_dsRNA_W4_col.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "15:05:18"
}
}
dclab-tdms2rtdc-warnings
LimitingExportSizeWarning
in dclab.rtdc_dataset.export line 305:
Not all features have the same length! Limiting output event count to 8070 (max 8071) in '8070'.
FG_Config.mcf
[Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;
[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;
[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini
[Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6
[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini
[EVENT LOG] fRT-DC V1.06170206
Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 24.5683
Start pulse train for BG Aquisition..
Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 2.52462e+009
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 1050 frames Cell Events: 30 mean_circ: 0.953937
Ran for 1550 frames Cell Events: 52 mean_circ: 0.955567
Ran for 2050 frames Cell Events: 79 mean_circ: 0.955844
Ran for 2550 frames Cell Events: 93 mean_circ: 0.955015
Ran for 3550 frames Cell Events: 122 mean_circ: 0.952375
Ran for 4050 frames Cell Events: 137 mean_circ: 0.951501
Ran for 4550 frames Cell Events: 150 mean_circ: 0.951577
Ran for 5050 frames Cell Events: 157 mean_circ: 0.951686
Ran for 5550 frames Cell Events: 173 mean_circ: 0.951827
Ran for 6050 frames Cell Events: 186 mean_circ: 0.952457
Ran for 6550 frames Cell Events: 204 mean_circ: 0.952446
Ran for 7050 frames Cell Events: 219 mean_circ: 0.952949
Ran for 7550 frames Cell Events: 230 mean_circ: 0.953343
Ran for 8050 frames Cell Events: 244 mean_circ: 0.953172
Ran for 8550 frames Cell Events: 253 mean_circ: 0.953614
Ran for 9050 frames Cell Events: 267 mean_circ: 0.953546
Ran for 9550 frames Cell Events: 274 mean_circ: 0.953874
Ran for 10050 frames Cell Events: 292 mean_circ: 0.953859
Ran for 11550 frames Cell Events: 352 mean_circ: 0.953463
Ran for 12050 frames Cell Events: 360 mean_circ: 0.953614
Ran for 12550 frames Cell Events: 370 mean_circ: 0.953753
Ran for 13550 frames Cell Events: 405 mean_circ: 0.953943
Ran for 14050 frames Cell Events: 414 mean_circ: 0.954028
Ran for 14550 frames Cell Events: 430 mean_circ: 0.953747
Ran for 15050 frames Cell Events: 447 mean_circ: 0.953576
Ran for 17550 frames Cell Events: 513 mean_circ: 0.953233
Ran for 18050 frames Cell Events: 524 mean_circ: 0.953309
Ran for 19050 frames Cell Events: 570 mean_circ: 0.953175
Ran for 20050 frames Cell Events: 590 mean_circ: 0.953113
Ran for 20550 frames Cell Events: 607 mean_circ: 0.953174
Ran for 21050 frames Cell Events: 619 mean_circ: 0.953268
Ran for 22050 frames Cell Events: 645 mean_circ: 0.952889
Ran for 22550 frames Cell Events: 657 mean_circ: 0.952975
Ran for 23550 frames Cell Events: 703 mean_circ: 0.953148
Ran for 24050 frames Cell Events: 721 mean_circ: 0.953248
Ran for 25050 frames Cell Events: 747 mean_circ: 0.953366
Ran for 25550 frames Cell Events: 765 mean_circ: 0.953457
Ran for 26050 frames Cell Events: 777 mean_circ: 0.953617
Ran for 26550 frames Cell Events: 792 mean_circ: 0.953633
Ran for 27050 frames Cell Events: 808 mean_circ: 0.953619
Ran for 28050 frames Cell Events: 837 mean_circ: 0.953673
Ran for 29050 frames Cell Events: 874 mean_circ: 0.953505
Ran for 30550 frames Cell Events: 916 mean_circ: 0.953314
Ran for 31050 frames Cell Events: 930 mean_circ: 0.953232
Ran for 31550 frames Cell Events: 949 mean_circ: 0.953312
Ran for 32050 frames Cell Events: 970 mean_circ: 0.953318
Ran for 33050 frames Cell Events: 997 mean_circ: 0.953436
Ran for 34050 frames Cell Events: 1031 mean_circ: 0.953615
Ran for 34550 frames Cell Events: 1046 mean_circ: 0.953565
Ran for 35050 frames Cell Events: 1064 mean_circ: 0.95352
Ran for 35550 frames Cell Events: 1086 mean_circ: 0.953462
Ran for 36050 frames Cell Events: 1109 mean_circ: 0.953546
Ran for 36550 frames Cell Events: 1126 mean_circ: 0.953487
Ran for 37050 frames Cell Events: 1141 mean_circ: 0.953475
Ran for 38050 frames Cell Events: 1182 mean_circ: 0.953219
Ran for 38550 frames Cell Events: 1192 mean_circ: 0.953129
Ran for 40050 frames Cell Events: 1242 mean_circ: 0.953102
Ran for 40550 frames Cell Events: 1258 mean_circ: 0.953201
Ran for 41050 frames Cell Events: 1282 mean_circ: 0.953188
Ran for 41550 frames Cell Events: 1294 mean_circ: 0.953148
Ran for 42050 frames Cell Events: 1314 mean_circ: 0.953209
Ran for 42550 frames Cell Events: 1329 mean_circ: 0.953058
Ran for 43050 frames Cell Events: 1347 mean_circ: 0.953076
Ran for 44050 frames Cell Events: 1383 mean_circ: 0.95296
Ran for 44550 frames Cell Events: 1403 mean_circ: 0.952973
Ran for 45050 frames Cell Events: 1422 mean_circ: 0.953019
Ran for 45550 frames Cell Events: 1444 mean_circ: 0.952768
Ran for 46050 frames Cell Events: 1468 mean_circ: 0.952863
Ran for 47050 frames Cell Events: 1494 mean_circ: 0.952841
Ran for 49550 frames Cell Events: 1571 mean_circ: 0.952989
Ran for 50050 frames Cell Events: 1587 mean_circ: 0.953059
Ran for 50550 frames Cell Events: 1600 mean_circ: 0.953088
Ran for 51050 frames Cell Events: 1618 mean_circ: 0.95295
Ran for 53050 frames Cell Events: 1691 mean_circ: 0.953249
Ran for 54050 frames Cell Events: 1721 mean_circ: 0.95311
Ran for 54550 frames Cell Events: 1734 mean_circ: 0.953173
Ran for 55550 frames Cell Events: 1762 mean_circ: 0.953111
Ran for 56550 frames Cell Events: 1803 mean_circ: 0.953025
Ran for 57550 frames Cell Events: 1850 mean_circ: 0.953065
Ran for 58050 frames Cell Events: 1861 mean_circ: 0.953095
Ran for 58550 frames Cell Events: 1878 mean_circ: 0.953066
Ran for 59550 frames Cell Events: 1916 mean_circ: 0.953185
Ran for 60050 frames Cell Events: 1933 mean_circ: 0.953197
Ran for 61550 frames Cell Events: 1987 mean_circ: 0.95308
Ran for 62050 frames Cell Events: 2004 mean_circ: 0.953085
Ran for 62550 frames Cell Events: 2015 mean_circ: 0.953125
Ran for 63050 frames Cell Events: 2032 mean_circ: 0.953136
Ran for 64050 frames Cell Events: 2068 mean_circ: 0.953252
Ran for 65050 frames Cell Events: 2099 mean_circ: 0.953254
Ran for 65550 frames Cell Events: 2117 mean_circ: 0.953226
Ran for 67550 frames Cell Events: 2189 mean_circ: 0.953196
Ran for 68050 frames Cell Events: 2199 mean_circ: 0.953187
Ran for 68550 frames Cell Events: 2216 mean_circ: 0.953211
Ran for 70550 frames Cell Events: 2293 mean_circ: 0.953313
Ran for 71050 frames Cell Events: 2314 mean_circ: 0.953218
Ran for 71550 frames Cell Events: 2330 mean_circ: 0.953103
Ran for 72550 frames Cell Events: 2370 mean_circ: 0.95314
Ran for 73050 frames Cell Events: 2387 mean_circ: 0.953204
Ran for 73550 frames Cell Events: 2409 mean_circ: 0.953205
Ran for 74550 frames Cell Events: 2439 mean_circ: 0.953253
Ran for 75050 frames Cell Events: 2462 mean_circ: 0.953276
Ran for 76550 frames Cell Events: 2518 mean_circ: 0.953286
Ran for 77050 frames Cell Events: 2539 mean_circ: 0.953294
Ran for 77550 frames Cell Events: 2552 mean_circ: 0.953333
Ran for 78050 frames Cell Events: 2560 mean_circ: 0.953367
Ran for 78550 frames Cell Events: 2589 mean_circ: 0.953416
Ran for 79050 frames Cell Events: 2602 mean_circ: 0.953453
Ran for 79550 frames Cell Events: 2622 mean_circ: 0.953382
Ran for 81050 frames Cell Events: 2665 mean_circ: 0.953294
Ran for 82050 frames Cell Events: 2697 mean_circ: 0.953267
Ran for 82550 frames Cell Events: 2712 mean_circ: 0.953304
Ran for 83050 frames Cell Events: 2727 mean_circ: 0.953312
Ran for 83550 frames Cell Events: 2744 mean_circ: 0.953342
Ran for 84050 frames Cell Events: 2752 mean_circ: 0.953304
Ran for 85050 frames Cell Events: 2785 mean_circ: 0.953298
Ran for 85550 frames Cell Events: 2804 mean_circ: 0.953314
Ran for 86550 frames Cell Events: 2833 mean_circ: 0.9533
Ran for 87050 frames Cell Events: 2845 mean_circ: 0.953312
Ran for 87550 frames Cell Events: 2860 mean_circ: 0.953358
Ran for 88050 frames Cell Events: 2879 mean_circ: 0.953332
Ran for 88550 frames Cell Events: 2895 mean_circ: 0.953381
Ran for 89050 frames Cell Events: 2913 mean_circ: 0.953408
Ran for 90050 frames Cell Events: 2938 mean_circ: 0.953315
Ran for 90550 frames Cell Events: 2958 mean_circ: 0.953241
Ran for 91550 frames Cell Events: 2997 mean_circ: 0.953219
Ran for 92550 frames Cell Events: 3035 mean_circ: 0.953265
Ran for 93550 frames Cell Events: 3063 mean_circ: 0.95325
Ran for 94050 frames Cell Events: 3078 mean_circ: 0.95326
Ran for 94550 frames Cell Events: 3091 mean_circ: 0.953185
Ran for 95050 frames Cell Events: 3106 mean_circ: 0.953173
Ran for 97050 frames Cell Events: 3164 mean_circ: 0.9532
Ran for 97550 frames Cell Events: 3176 mean_circ: 0.953195
Ran for 98050 frames Cell Events: 3197 mean_circ: 0.953203
Ran for 98550 frames Cell Events: 3215 mean_circ: 0.953212
Ran for 99050 frames Cell Events: 3227 mean_circ: 0.953131
Ran for 99550 frames Cell Events: 3245 mean_circ: 0.953141
Ran for 101050 frames Cell Events: 3309 mean_circ: 0.953068
Ran for 102050 frames Cell Events: 3340 mean_circ: 0.953008
Ran for 103050 frames Cell Events: 3375 mean_circ: 0.952992
Ran for 104050 frames Cell Events: 3397 mean_circ: 0.952954
Ran for 104550 frames Cell Events: 3418 mean_circ: 0.952922
Ran for 105050 frames Cell Events: 3434 mean_circ: 0.952924
Ran for 105550 frames Cell Events: 3448 mean_circ: 0.952972
Ran for 106050 frames Cell Events: 3463 mean_circ: 0.952934
Ran for 106550 frames Cell Events: 3476 mean_circ: 0.952928
Ran for 107050 frames Cell Events: 3494 mean_circ: 0.952937
Ran for 108050 frames Cell Events: 3531 mean_circ: 0.95289
Ran for 108550 frames Cell Events: 3542 mean_circ: 0.952946
Ran for 109050 frames Cell Events: 3559 mean_circ: 0.952991
Ran for 111050 frames Cell Events: 3615 mean_circ: 0.952988
Ran for 112050 frames Cell Events: 3656 mean_circ: 0.952994
Ran for 112550 frames Cell Events: 3670 mean_circ: 0.953011
Ran for 114050 frames Cell Events: 3747 mean_circ: 0.953
Ran for 114550 frames Cell Events: 3763 mean_circ: 0.952978
Ran for 115050 frames Cell Events: 3784 mean_circ: 0.953002
Ran for 115550 frames Cell Events: 3801 mean_circ: 0.952997
Ran for 116050 frames Cell Events: 3817 mean_circ: 0.953026
Ran for 117050 frames Cell Events: 3847 mean_circ: 0.952979
Ran for 117550 frames Cell Events: 3857 mean_circ: 0.953015
Ran for 118050 frames Cell Events: 3872 mean_circ: 0.952986
Ran for 118550 frames Cell Events: 3885 mean_circ: 0.952979
Ran for 120050 frames Cell Events: 3939 mean_circ: 0.952956
Ran for 121550 frames Cell Events: 4003 mean_circ: 0.952949
Ran for 122050 frames Cell Events: 4015 mean_circ: 0.952956
Ran for 122550 frames Cell Events: 4031 mean_circ: 0.95297
Ran for 123050 frames Cell Events: 4046 mean_circ: 0.95299
Ran for 123550 frames Cell Events: 4061 mean_circ: 0.953007
Ran for 125550 frames Cell Events: 4138 mean_circ: 0.953016
Ran for 126050 frames Cell Events: 4157 mean_circ: 0.952964
Ran for 126550 frames Cell Events: 4174 mean_circ: 0.952901
Ran for 127050 frames Cell Events: 4182 mean_circ: 0.952884
Ran for 127550 frames Cell Events: 4195 mean_circ: 0.952875
Ran for 128050 frames Cell Events: 4210 mean_circ: 0.952869
Ran for 128550 frames Cell Events: 4222 mean_circ: 0.952887
Ran for 129050 frames Cell Events: 4240 mean_circ: 0.952914
Ran for 129550 frames Cell Events: 4255 mean_circ: 0.952914
Ran for 130550 frames Cell Events: 4306 mean_circ: 0.952916
Ran for 131050 frames Cell Events: 4326 mean_circ: 0.952951
Ran for 131550 frames Cell Events: 4338 mean_circ: 0.952926
Ran for 132050 frames Cell Events: 4353 mean_circ: 0.952893
Ran for 133050 frames Cell Events: 4384 mean_circ: 0.952833
Ran for 133550 frames Cell Events: 4407 mean_circ: 0.952833
Ran for 134050 frames Cell Events: 4426 mean_circ: 0.952816
Ran for 134550 frames Cell Events: 4446 mean_circ: 0.95284
Ran for 135050 frames Cell Events: 4464 mean_circ: 0.952863
Ran for 136050 frames Cell Events: 4488 mean_circ: 0.952855
Ran for 136550 frames Cell Events: 4501 mean_circ: 0.952899
Ran for 137050 frames Cell Events: 4515 mean_circ: 0.952848
Ran for 137550 frames Cell Events: 4529 mean_circ: 0.952863
Ran for 138550 frames Cell Events: 4562 mean_circ: 0.952853
Ran for 139050 frames Cell Events: 4574 mean_circ: 0.952838
Ran for 141050 frames Cell Events: 4644 mean_circ: 0.952933
Ran for 142050 frames Cell Events: 4673 mean_circ: 0.952888
Ran for 142550 frames Cell Events: 4694 mean_circ: 0.95283
Ran for 143550 frames Cell Events: 4734 mean_circ: 0.952783
Ran for 145050 frames Cell Events: 4806 mean_circ: 0.952834
Ran for 145550 frames Cell Events: 4827 mean_circ: 0.952828
Ran for 146550 frames Cell Events: 4875 mean_circ: 0.952744
Ran for 148050 frames Cell Events: 4932 mean_circ: 0.952725
Ran for 148550 frames Cell Events: 4956 mean_circ: 0.952677
Ran for 149050 frames Cell Events: 4967 mean_circ: 0.952671
Ran for 149550 frames Cell Events: 4984 mean_circ: 0.952667
Ran for 150050 frames Cell Events: 4999 mean_circ: 0.952699
Ran for 150550 frames Cell Events: 5020 mean_circ: 0.9527
Ran for 151050 frames Cell Events: 5037 mean_circ: 0.952686
Ran for 151550 frames Cell Events: 5057 mean_circ: 0.952631
Ran for 153550 frames Cell Events: 5134 mean_circ: 0.952648
Ran for 154550 frames Cell Events: 5158 mean_circ: 0.952647
Ran for 156050 frames Cell Events: 5212 mean_circ: 0.952635
Ran for 156550 frames Cell Events: 5238 mean_circ: 0.952642
Ran for 157050 frames Cell Events: 5256 mean_circ: 0.952618
Ran for 157550 frames Cell Events: 5269 mean_circ: 0.952629
Ran for 158050 frames Cell Events: 5293 mean_circ: 0.952622
Ran for 158550 frames Cell Events: 5314 mean_circ: 0.952623
Ran for 159050 frames Cell Events: 5335 mean_circ: 0.952598
Ran for 159550 frames Cell Events: 5349 mean_circ: 0.952565
Ran for 161050 frames Cell Events: 5426 mean_circ: 0.952613
Ran for 162050 frames Cell Events: 5481 mean_circ: 0.952622
Ran for 162550 frames Cell Events: 5502 mean_circ: 0.952664
Ran for 163550 frames Cell Events: 5541 mean_circ: 0.952684
Ran for 164050 frames Cell Events: 5555 mean_circ: 0.95265
Ran for 164550 frames Cell Events: 5568 mean_circ: 0.952672
Ran for 165050 frames Cell Events: 5596 mean_circ: 0.952666
Ran for 166050 frames Cell Events: 5639 mean_circ: 0.952687
Ran for 167050 frames Cell Events: 5681 mean_circ: 0.952657
Ran for 167550 frames Cell Events: 5697 mean_circ: 0.952639
Ran for 168050 frames Cell Events: 5712 mean_circ: 0.952629
Ran for 169050 frames Cell Events: 5746 mean_circ: 0.952661
Ran for 169550 frames Cell Events: 5764 mean_circ: 0.952682
Ran for 171550 frames Cell Events: 5854 mean_circ: 0.952593
Ran for 172050 frames Cell Events: 5867 mean_circ: 0.9526
Ran for 172550 frames Cell Events: 5878 mean_circ: 0.952612
Ran for 173050 frames Cell Events: 5889 mean_circ: 0.952593
Ran for 173550 frames Cell Events: 5905 mean_circ: 0.952587
Ran for 176550 frames Cell Events: 6009 mean_circ: 0.952565
Ran for 177050 frames Cell Events: 6023 mean_circ: 0.952575
Ran for 177550 frames Cell Events: 6040 mean_circ: 0.952582
Ran for 178050 frames Cell Events: 6058 mean_circ: 0.952556
Ran for 178550 frames Cell Events: 6079 mean_circ: 0.952533
Ran for 179050 frames Cell Events: 6100 mean_circ: 0.952506
Ran for 179550 frames Cell Events: 6115 mean_circ: 0.952517
Ran for 180050 frames Cell Events: 6132 mean_circ: 0.952521
Ran for 180550 frames Cell Events: 6144 mean_circ: 0.952531
Ran for 181550 frames Cell Events: 6196 mean_circ: 0.952534
Ran for 182050 frames Cell Events: 6209 mean_circ: 0.952531
Ran for 183050 frames Cell Events: 6247 mean_circ: 0.952503
Ran for 183550 frames Cell Events: 6259 mean_circ: 0.952472
Ran for 184050 frames Cell Events: 6277 mean_circ: 0.952448
Ran for 185050 frames Cell Events: 6313 mean_circ: 0.952476
Ran for 185550 frames Cell Events: 6325 mean_circ: 0.952485
Ran for 186550 frames Cell Events: 6362 mean_circ: 0.952499
Ran for 187550 frames Cell Events: 6399 mean_circ: 0.952492
Ran for 188550 frames Cell Events: 6446 mean_circ: 0.952523
Ran for 189050 frames Cell Events: 6466 mean_circ: 0.952544
Ran for 189550 frames Cell Events: 6493 mean_circ: 0.952554
Ran for 190550 frames Cell Events: 6535 mean_circ: 0.9526
Ran for 191050 frames Cell Events: 6551 mean_circ: 0.9526
Ran for 191550 frames Cell Events: 6563 mean_circ: 0.952607
Ran for 192050 frames Cell Events: 6582 mean_circ: 0.952591
Ran for 192550 frames Cell Events: 6601 mean_circ: 0.952598
Ran for 193050 frames Cell Events: 6614 mean_circ: 0.952582
Ran for 193550 frames Cell Events: 6630 mean_circ: 0.952579
Ran for 194050 frames Cell Events: 6641 mean_circ: 0.952557
Ran for 194550 frames Cell Events: 6658 mean_circ: 0.952572
Ran for 195550 frames Cell Events: 6690 mean_circ: 0.952553
Ran for 196550 frames Cell Events: 6734 mean_circ: 0.952545
Ran for 197550 frames Cell Events: 6777 mean_circ: 0.952546
Ran for 199050 frames Cell Events: 6829 mean_circ: 0.952563
Ran for 199550 frames Cell Events: 6843 mean_circ: 0.952572
Ran for 200050 frames Cell Events: 6861 mean_circ: 0.952576
Ran for 200550 frames Cell Events: 6878 mean_circ: 0.952582
Ran for 201050 frames Cell Events: 6904 mean_circ: 0.952566
Ran for 201550 frames Cell Events: 6912 mean_circ: 0.952582
Ran for 202550 frames Cell Events: 6944 mean_circ: 0.952617
Ran for 203050 frames Cell Events: 6961 mean_circ: 0.952609
Ran for 204050 frames Cell Events: 6993 mean_circ: 0.952572
Ran for 204550 frames Cell Events: 7013 mean_circ: 0.952588
Ran for 206050 frames Cell Events: 7069 mean_circ: 0.952627
Ran for 206550 frames Cell Events: 7082 mean_circ: 0.952641
Ran for 207050 frames Cell Events: 7094 mean_circ: 0.952653
Ran for 207550 frames Cell Events: 7112 mean_circ: 0.952644
Ran for 208050 frames Cell Events: 7130 mean_circ: 0.952653
Ran for 208550 frames Cell Events: 7145 mean_circ: 0.952628
Ran for 209050 frames Cell Events: 7152 mean_circ: 0.952619
Ran for 209550 frames Cell Events: 7169 mean_circ: 0.952592
Ran for 210050 frames Cell Events: 7186 mean_circ: 0.952557
Ran for 211050 frames Cell Events: 7227 mean_circ: 0.952532
Ran for 211550 frames Cell Events: 7248 mean_circ: 0.952541
Ran for 212550 frames Cell Events: 7300 mean_circ: 0.952493
Ran for 213550 frames Cell Events: 7340 mean_circ: 0.952482
Ran for 214550 frames Cell Events: 7371 mean_circ: 0.952459
Ran for 215550 frames Cell Events: 7410 mean_circ: 0.95249
Ran for 216550 frames Cell Events: 7443 mean_circ: 0.952469
Ran for 217550 frames Cell Events: 7485 mean_circ: 0.95244
Ran for 218550 frames Cell Events: 7522 mean_circ: 0.952463
Ran for 219050 frames Cell Events: 7534 mean_circ: 0.952477
Ran for 220050 frames Cell Events: 7572 mean_circ: 0.952453
Ran for 220550 frames Cell Events: 7587 mean_circ: 0.952451
Ran for 221550 frames Cell Events: 7634 mean_circ: 0.952456
Ran for 222050 frames Cell Events: 7650 mean_circ: 0.952447
Ran for 222550 frames Cell Events: 7665 mean_circ: 0.952448
Ran for 223050 frames Cell Events: 7685 mean_circ: 0.952443
Ran for 225050 frames Cell Events: 7750 mean_circ: 0.952444
Ran for 225550 frames Cell Events: 7774 mean_circ: 0.952457
Ran for 226050 frames Cell Events: 7805 mean_circ: 0.952432
Ran for 226550 frames Cell Events: 7820 mean_circ: 0.952441
Ran for 227550 frames Cell Events: 7852 mean_circ: 0.952426
Ran for 228550 frames Cell Events: 7897 mean_circ: 0.95241
Ran for 229550 frames Cell Events: 7934 mean_circ: 0.952435
Ran for 230050 frames Cell Events: 7950 mean_circ: 0.952452
Ran for 230550 frames Cell Events: 7980 mean_circ: 0.952455
Ran for 231050 frames Cell Events: 8002 mean_circ: 0.952448
Ran for 232050 frames Cell Events: 8041 mean_circ: 0.952471
End this measurment..
Stopping time: 2.52473e+009
****************************************
Measurement finished
Mean Circularitiy: 0.952457
Mean Area: 589.555
Mean FL-1 intensity: 3024.6
Mean FL-2 intensity: 3370.29
Mean FL-3 intensity: 0
frames processed: 232632
Total Time: 116499ms
Number of Runs (new bg img) 0
Frames collected: 232858
Skipped frames: 3087
Rescued Frames: 501546
Samples DAQ: 58214493
Samples written: 116428902
Samples per Channel: 58214451
FPS: 1998.81
Samples per second: 499701
Expected samples/s: 500000
Events: 8071
Events per second: 69.2798
jumped back (PMT): 5410
#Frames read, frequency
# 0 frames :332886
# 1 frames :114252
# 2 frames :5501
# 3 frames :1998
# 4 frames :1158
# 5 frames :533
# 6 frames :1226
# 7 frames :1975
# 8 frames :1248
# 9 frames :725
# 10 frames :899
# 11 frames :850
# 12 frames :610
# 13 frames :354
# 14 frames :226
# 15 frames :207
# 16 frames :192
# 17 frames :157
# 18 frames :118
# 19 frames :87
# 20 frames :78
# 21 frames :56
# 22 frames :47
# 23 frames :42
# 24 frames :27
# 25 frames :36
# 26 frames :25
# 27 frames :14
# 28 frames :14
# 29 frames :11
# 30 frames :14
# 31 frames :9
# 32 frames :8
# 33 frames :3
# 34 frames :5
# 35 frames :2
# 36 frames :2
# 37 frames :3
# 38 frames :3
# 39 frames :2
# 40 frames :2
# 41 frames :1
# 42 frames :3
# 43 frames :2
# 45 frames :4
# 46 frames :1
# 47 frames :1
# 50 frames :1
# 51 frames :1
# 54 frames :1
# 57 frames :1
# 64 frames :1
M1_para.ini
[General]
Measurement Number = 1
Flow Rate [ul/s] = 0.04
Region = "Channel"
Channel width = 20
Current LED = 100
[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 6
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0
#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 24.5683
parameters.txt
#fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 6
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 300
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0