Click on the log titles below to expand the log entries present in this DC resource.
dclab-export_2024-07-10_15.27.33
{"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc
{
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "9be4969f5c7d80d4eb6ab6f86f2e3801",
"name": "M1_20170609_1448_dsRNA_Y5_col.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "13:27:53"
}
}
dclab-tdms2rtdc-warnings
LimitingExportSizeWarning
in dclab.rtdc_dataset.export line 305:
Not all features have the same length! Limiting output event count to 8065 (max 8066) in '8065'.
FG_Config.mcf
[Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;
[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;
[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini
[Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6
[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini
[EVENT LOG] fRT-DC V1.06170206
Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 25.3914
Start pulse train for BG Aquisition..
Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 2.18311e+009
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 550 frames Cell Events: 21 mean_circ: 0.918164
Ran for 1050 frames Cell Events: 41 mean_circ: 0.924589
Ran for 1550 frames Cell Events: 71 mean_circ: 0.924589
Ran for 2050 frames Cell Events: 81 mean_circ: 0.927045
Ran for 2550 frames Cell Events: 101 mean_circ: 0.931195
Ran for 3550 frames Cell Events: 131 mean_circ: 0.934123
Ran for 4050 frames Cell Events: 144 mean_circ: 0.934226
Ran for 4550 frames Cell Events: 158 mean_circ: 0.934503
Ran for 5050 frames Cell Events: 170 mean_circ: 0.936315
Ran for 6050 frames Cell Events: 189 mean_circ: 0.936702
Ran for 6550 frames Cell Events: 202 mean_circ: 0.936948
Ran for 7050 frames Cell Events: 216 mean_circ: 0.936864
Ran for 7550 frames Cell Events: 229 mean_circ: 0.937482
Ran for 8550 frames Cell Events: 262 mean_circ: 0.938211
Ran for 9050 frames Cell Events: 276 mean_circ: 0.937789
Ran for 9550 frames Cell Events: 294 mean_circ: 0.93814
Ran for 10050 frames Cell Events: 299 mean_circ: 0.938233
Ran for 11050 frames Cell Events: 328 mean_circ: 0.938787
Ran for 11550 frames Cell Events: 338 mean_circ: 0.939519
Ran for 12050 frames Cell Events: 348 mean_circ: 0.939791
Ran for 12550 frames Cell Events: 360 mean_circ: 0.93977
Ran for 13050 frames Cell Events: 377 mean_circ: 0.939063
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Ran for 14550 frames Cell Events: 422 mean_circ: 0.940421
Ran for 15050 frames Cell Events: 435 mean_circ: 0.940489
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Ran for 20050 frames Cell Events: 560 mean_circ: 0.941807
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Ran for 35050 frames Cell Events: 925 mean_circ: 0.941879
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Ran for 37550 frames Cell Events: 999 mean_circ: 0.941589
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Ran for 67050 frames Cell Events: 1745 mean_circ: 0.941465
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Ran for 68550 frames Cell Events: 1772 mean_circ: 0.941347
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Ran for 70050 frames Cell Events: 1808 mean_circ: 0.941327
Ran for 70550 frames Cell Events: 1826 mean_circ: 0.941254
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Ran for 71550 frames Cell Events: 1851 mean_circ: 0.941385
Ran for 72050 frames Cell Events: 1865 mean_circ: 0.941456
Ran for 72550 frames Cell Events: 1873 mean_circ: 0.941369
Ran for 73050 frames Cell Events: 1880 mean_circ: 0.941415
Ran for 74550 frames Cell Events: 1921 mean_circ: 0.94164
Ran for 75050 frames Cell Events: 1931 mean_circ: 0.941656
Ran for 75550 frames Cell Events: 1938 mean_circ: 0.941627
Ran for 76050 frames Cell Events: 1952 mean_circ: 0.941732
Ran for 76550 frames Cell Events: 1959 mean_circ: 0.941692
Ran for 77050 frames Cell Events: 1969 mean_circ: 0.941691
Ran for 77550 frames Cell Events: 1980 mean_circ: 0.94154
Ran for 78050 frames Cell Events: 1987 mean_circ: 0.941557
Ran for 79050 frames Cell Events: 2004 mean_circ: 0.941627
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Ran for 81550 frames Cell Events: 2059 mean_circ: 0.941677
Ran for 82050 frames Cell Events: 2066 mean_circ: 0.941695
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Ran for 83050 frames Cell Events: 2087 mean_circ: 0.941669
Ran for 83550 frames Cell Events: 2101 mean_circ: 0.941772
Ran for 84050 frames Cell Events: 2111 mean_circ: 0.941793
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Ran for 85050 frames Cell Events: 2136 mean_circ: 0.941769
Ran for 85550 frames Cell Events: 2146 mean_circ: 0.941832
Ran for 87550 frames Cell Events: 2193 mean_circ: 0.941974
Ran for 88050 frames Cell Events: 2198 mean_circ: 0.941928
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Ran for 89550 frames Cell Events: 2231 mean_circ: 0.941834
Ran for 90550 frames Cell Events: 2266 mean_circ: 0.941885
Ran for 91550 frames Cell Events: 2296 mean_circ: 0.941931
Ran for 92550 frames Cell Events: 2326 mean_circ: 0.941997
Ran for 93550 frames Cell Events: 2344 mean_circ: 0.942004
Ran for 94050 frames Cell Events: 2355 mean_circ: 0.94195
Ran for 94550 frames Cell Events: 2373 mean_circ: 0.941827
Ran for 95050 frames Cell Events: 2382 mean_circ: 0.941765
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Ran for 96050 frames Cell Events: 2404 mean_circ: 0.941836
Ran for 96550 frames Cell Events: 2417 mean_circ: 0.941875
Ran for 97050 frames Cell Events: 2425 mean_circ: 0.941886
Ran for 97550 frames Cell Events: 2436 mean_circ: 0.941787
Ran for 98050 frames Cell Events: 2443 mean_circ: 0.941713
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Ran for 100050 frames Cell Events: 2493 mean_circ: 0.941563
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Ran for 102050 frames Cell Events: 2529 mean_circ: 0.941413
Ran for 103050 frames Cell Events: 2550 mean_circ: 0.941387
Ran for 103550 frames Cell Events: 2569 mean_circ: 0.941254
Ran for 104050 frames Cell Events: 2582 mean_circ: 0.94128
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Ran for 106550 frames Cell Events: 2656 mean_circ: 0.941123
Ran for 107050 frames Cell Events: 2672 mean_circ: 0.941251
Ran for 108050 frames Cell Events: 2710 mean_circ: 0.940858
Ran for 108550 frames Cell Events: 2720 mean_circ: 0.940835
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Ran for 110050 frames Cell Events: 2765 mean_circ: 0.941017
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Ran for 111050 frames Cell Events: 2784 mean_circ: 0.941076
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Ran for 112050 frames Cell Events: 2812 mean_circ: 0.941068
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Ran for 113550 frames Cell Events: 2857 mean_circ: 0.941117
Ran for 114050 frames Cell Events: 2869 mean_circ: 0.941109
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Ran for 115050 frames Cell Events: 2886 mean_circ: 0.941158
Ran for 115550 frames Cell Events: 2898 mean_circ: 0.941216
Ran for 116050 frames Cell Events: 2910 mean_circ: 0.941297
Ran for 117550 frames Cell Events: 2975 mean_circ: 0.941202
Ran for 118050 frames Cell Events: 2992 mean_circ: 0.941203
Ran for 118550 frames Cell Events: 3011 mean_circ: 0.94115
Ran for 119050 frames Cell Events: 3019 mean_circ: 0.941212
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Ran for 120050 frames Cell Events: 3040 mean_circ: 0.941231
Ran for 120550 frames Cell Events: 3051 mean_circ: 0.941255
Ran for 121050 frames Cell Events: 3064 mean_circ: 0.941229
Ran for 121550 frames Cell Events: 3074 mean_circ: 0.941247
Ran for 122050 frames Cell Events: 3087 mean_circ: 0.941278
Ran for 122550 frames Cell Events: 3108 mean_circ: 0.941204
Ran for 123050 frames Cell Events: 3123 mean_circ: 0.941125
Ran for 123550 frames Cell Events: 3134 mean_circ: 0.941114
Ran for 124550 frames Cell Events: 3172 mean_circ: 0.941182
Ran for 125050 frames Cell Events: 3186 mean_circ: 0.941151
Ran for 126050 frames Cell Events: 3199 mean_circ: 0.941125
Ran for 126550 frames Cell Events: 3205 mean_circ: 0.941108
Ran for 127050 frames Cell Events: 3212 mean_circ: 0.94106
Ran for 128050 frames Cell Events: 3231 mean_circ: 0.941057
Ran for 128550 frames Cell Events: 3245 mean_circ: 0.94107
Ran for 129050 frames Cell Events: 3258 mean_circ: 0.941062
Ran for 130050 frames Cell Events: 3274 mean_circ: 0.941042
Ran for 130550 frames Cell Events: 3282 mean_circ: 0.941074
Ran for 131050 frames Cell Events: 3288 mean_circ: 0.941032
Ran for 131550 frames Cell Events: 3300 mean_circ: 0.941057
Ran for 132050 frames Cell Events: 3307 mean_circ: 0.941083
Ran for 132550 frames Cell Events: 3313 mean_circ: 0.941024
Ran for 133050 frames Cell Events: 3321 mean_circ: 0.941041
Ran for 134550 frames Cell Events: 3366 mean_circ: 0.94105
Ran for 135050 frames Cell Events: 3378 mean_circ: 0.940975
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Ran for 142550 frames Cell Events: 3581 mean_circ: 0.941249
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Ran for 147050 frames Cell Events: 3700 mean_circ: 0.941319
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Ran for 167050 frames Cell Events: 4182 mean_circ: 0.941847
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Ran for 171050 frames Cell Events: 4284 mean_circ: 0.941948
Ran for 173050 frames Cell Events: 4335 mean_circ: 0.941903
Ran for 173550 frames Cell Events: 4348 mean_circ: 0.941842
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Ran for 181050 frames Cell Events: 4522 mean_circ: 0.941851
Ran for 182050 frames Cell Events: 4559 mean_circ: 0.941885
Ran for 182550 frames Cell Events: 4570 mean_circ: 0.941863
Ran for 183050 frames Cell Events: 4582 mean_circ: 0.941915
Ran for 184550 frames Cell Events: 4625 mean_circ: 0.941818
Ran for 185050 frames Cell Events: 4637 mean_circ: 0.941831
Ran for 185550 frames Cell Events: 4648 mean_circ: 0.941824
Ran for 186050 frames Cell Events: 4655 mean_circ: 0.941815
Ran for 187550 frames Cell Events: 4695 mean_circ: 0.941877
Ran for 188050 frames Cell Events: 4706 mean_circ: 0.941775
Ran for 188550 frames Cell Events: 4717 mean_circ: 0.941738
Ran for 189050 frames Cell Events: 4727 mean_circ: 0.941741
Ran for 190550 frames Cell Events: 4776 mean_circ: 0.941789
Ran for 191050 frames Cell Events: 4783 mean_circ: 0.941753
Ran for 191550 frames Cell Events: 4794 mean_circ: 0.941745
Ran for 192550 frames Cell Events: 4819 mean_circ: 0.941733
Ran for 193550 frames Cell Events: 4840 mean_circ: 0.941648
Ran for 194050 frames Cell Events: 4857 mean_circ: 0.941601
Ran for 194550 frames Cell Events: 4867 mean_circ: 0.941573
Ran for 195550 frames Cell Events: 4883 mean_circ: 0.941593
Ran for 196050 frames Cell Events: 4896 mean_circ: 0.941609
Ran for 196550 frames Cell Events: 4909 mean_circ: 0.941656
Ran for 198050 frames Cell Events: 4940 mean_circ: 0.941674
Ran for 199050 frames Cell Events: 4958 mean_circ: 0.941658
Ran for 199550 frames Cell Events: 4964 mean_circ: 0.941663
Ran for 200550 frames Cell Events: 5000 mean_circ: 0.941745
Ran for 201550 frames Cell Events: 5030 mean_circ: 0.941715
Ran for 202050 frames Cell Events: 5044 mean_circ: 0.941738
Ran for 202550 frames Cell Events: 5053 mean_circ: 0.941724
Ran for 203550 frames Cell Events: 5081 mean_circ: 0.941695
Ran for 205050 frames Cell Events: 5113 mean_circ: 0.941632
Ran for 205550 frames Cell Events: 5119 mean_circ: 0.941611
Ran for 206050 frames Cell Events: 5136 mean_circ: 0.941603
Ran for 206550 frames Cell Events: 5153 mean_circ: 0.941636
Ran for 207050 frames Cell Events: 5167 mean_circ: 0.941659
Ran for 207550 frames Cell Events: 5183 mean_circ: 0.941638
Ran for 208050 frames Cell Events: 5188 mean_circ: 0.941596
Ran for 208550 frames Cell Events: 5213 mean_circ: 0.941575
Ran for 209550 frames Cell Events: 5236 mean_circ: 0.941544
Ran for 210050 frames Cell Events: 5254 mean_circ: 0.941566
Ran for 210550 frames Cell Events: 5261 mean_circ: 0.941571
Ran for 211550 frames Cell Events: 5290 mean_circ: 0.941598
Ran for 212050 frames Cell Events: 5306 mean_circ: 0.941652
Ran for 212550 frames Cell Events: 5319 mean_circ: 0.941648
Ran for 213050 frames Cell Events: 5327 mean_circ: 0.94164
Ran for 213550 frames Cell Events: 5340 mean_circ: 0.941608
Ran for 214050 frames Cell Events: 5354 mean_circ: 0.941577
Ran for 214550 frames Cell Events: 5366 mean_circ: 0.941588
Ran for 215050 frames Cell Events: 5386 mean_circ: 0.941585
Ran for 215550 frames Cell Events: 5393 mean_circ: 0.941618
Ran for 216550 frames Cell Events: 5427 mean_circ: 0.94164
Ran for 217050 frames Cell Events: 5443 mean_circ: 0.941604
Ran for 217550 frames Cell Events: 5454 mean_circ: 0.941631
Ran for 220050 frames Cell Events: 5533 mean_circ: 0.941479
Ran for 220550 frames Cell Events: 5547 mean_circ: 0.941489
Ran for 221050 frames Cell Events: 5553 mean_circ: 0.941533
Ran for 221550 frames Cell Events: 5569 mean_circ: 0.941581
Ran for 222550 frames Cell Events: 5601 mean_circ: 0.941567
Ran for 223050 frames Cell Events: 5613 mean_circ: 0.941537
Ran for 223550 frames Cell Events: 5626 mean_circ: 0.941547
Ran for 224050 frames Cell Events: 5634 mean_circ: 0.94157
Ran for 224550 frames Cell Events: 5649 mean_circ: 0.941576
Ran for 225550 frames Cell Events: 5677 mean_circ: 0.941658
Ran for 226050 frames Cell Events: 5685 mean_circ: 0.941634
Ran for 226550 frames Cell Events: 5695 mean_circ: 0.941626
Ran for 227050 frames Cell Events: 5706 mean_circ: 0.941628
Ran for 227550 frames Cell Events: 5720 mean_circ: 0.94166
Ran for 228050 frames Cell Events: 5729 mean_circ: 0.941635
Ran for 229550 frames Cell Events: 5769 mean_circ: 0.941621
Ran for 230050 frames Cell Events: 5780 mean_circ: 0.941583
Ran for 230550 frames Cell Events: 5795 mean_circ: 0.941618
Ran for 231050 frames Cell Events: 5807 mean_circ: 0.941615
Ran for 232050 frames Cell Events: 5836 mean_circ: 0.941526
Ran for 232550 frames Cell Events: 5849 mean_circ: 0.941529
Ran for 233550 frames Cell Events: 5866 mean_circ: 0.941561
Ran for 234050 frames Cell Events: 5878 mean_circ: 0.941512
Ran for 234550 frames Cell Events: 5896 mean_circ: 0.941475
Ran for 235550 frames Cell Events: 5923 mean_circ: 0.941506
Ran for 236050 frames Cell Events: 5932 mean_circ: 0.941517
Ran for 236550 frames Cell Events: 5949 mean_circ: 0.941538
Ran for 237550 frames Cell Events: 5986 mean_circ: 0.941591
Ran for 238550 frames Cell Events: 6014 mean_circ: 0.941553
Ran for 239050 frames Cell Events: 6030 mean_circ: 0.941556
Ran for 239550 frames Cell Events: 6040 mean_circ: 0.941566
Ran for 240050 frames Cell Events: 6052 mean_circ: 0.94156
Ran for 240550 frames Cell Events: 6066 mean_circ: 0.941617
Ran for 241050 frames Cell Events: 6079 mean_circ: 0.941639
Ran for 241550 frames Cell Events: 6097 mean_circ: 0.941632
Ran for 242550 frames Cell Events: 6131 mean_circ: 0.941672
Ran for 243050 frames Cell Events: 6140 mean_circ: 0.94168
Ran for 244550 frames Cell Events: 6177 mean_circ: 0.941679
Ran for 245050 frames Cell Events: 6183 mean_circ: 0.941705
Ran for 247050 frames Cell Events: 6234 mean_circ: 0.941785
Ran for 247550 frames Cell Events: 6240 mean_circ: 0.941809
Ran for 248050 frames Cell Events: 6247 mean_circ: 0.941763
Ran for 249050 frames Cell Events: 6268 mean_circ: 0.941789
Ran for 249550 frames Cell Events: 6278 mean_circ: 0.941792
Ran for 250050 frames Cell Events: 6288 mean_circ: 0.94168
Ran for 250550 frames Cell Events: 6298 mean_circ: 0.941637
Ran for 251050 frames Cell Events: 6308 mean_circ: 0.941615
Ran for 251550 frames Cell Events: 6320 mean_circ: 0.941636
Ran for 252050 frames Cell Events: 6323 mean_circ: 0.941648
Ran for 252550 frames Cell Events: 6337 mean_circ: 0.94168
Ran for 253050 frames Cell Events: 6358 mean_circ: 0.941681
Ran for 253550 frames Cell Events: 6370 mean_circ: 0.941714
Ran for 254050 frames Cell Events: 6377 mean_circ: 0.941735
Ran for 255050 frames Cell Events: 6391 mean_circ: 0.941732
Ran for 256050 frames Cell Events: 6412 mean_circ: 0.941705
Ran for 256550 frames Cell Events: 6427 mean_circ: 0.941742
Ran for 257050 frames Cell Events: 6444 mean_circ: 0.94173
Ran for 257550 frames Cell Events: 6452 mean_circ: 0.941711
Ran for 258050 frames Cell Events: 6467 mean_circ: 0.941727
Ran for 258550 frames Cell Events: 6476 mean_circ: 0.94173
Ran for 259050 frames Cell Events: 6491 mean_circ: 0.941757
Ran for 260050 frames Cell Events: 6516 mean_circ: 0.941786
Ran for 260550 frames Cell Events: 6529 mean_circ: 0.941786
Ran for 261050 frames Cell Events: 6545 mean_circ: 0.941794
Ran for 262050 frames Cell Events: 6570 mean_circ: 0.941792
Ran for 262550 frames Cell Events: 6585 mean_circ: 0.941838
Ran for 263050 frames Cell Events: 6593 mean_circ: 0.941826
Ran for 263550 frames Cell Events: 6601 mean_circ: 0.941849
Ran for 264550 frames Cell Events: 6620 mean_circ: 0.941892
Ran for 265050 frames Cell Events: 6641 mean_circ: 0.941892
Ran for 265550 frames Cell Events: 6651 mean_circ: 0.941825
Ran for 266050 frames Cell Events: 6669 mean_circ: 0.94184
Ran for 266550 frames Cell Events: 6686 mean_circ: 0.94188
Ran for 267550 frames Cell Events: 6717 mean_circ: 0.941935
Ran for 268050 frames Cell Events: 6725 mean_circ: 0.941953
Ran for 268550 frames Cell Events: 6738 mean_circ: 0.941944
Ran for 269050 frames Cell Events: 6744 mean_circ: 0.941959
Ran for 269550 frames Cell Events: 6756 mean_circ: 0.941982
Ran for 271550 frames Cell Events: 6806 mean_circ: 0.941994
Ran for 272050 frames Cell Events: 6823 mean_circ: 0.941951
Ran for 273050 frames Cell Events: 6852 mean_circ: 0.941991
Ran for 273550 frames Cell Events: 6867 mean_circ: 0.941993
Ran for 274050 frames Cell Events: 6880 mean_circ: 0.942008
Ran for 274550 frames Cell Events: 6884 mean_circ: 0.942023
Ran for 275550 frames Cell Events: 6908 mean_circ: 0.942054
Ran for 276050 frames Cell Events: 6916 mean_circ: 0.942052
Ran for 276550 frames Cell Events: 6930 mean_circ: 0.942079
Ran for 277550 frames Cell Events: 6947 mean_circ: 0.942083
Ran for 278050 frames Cell Events: 6955 mean_circ: 0.942094
Ran for 278550 frames Cell Events: 6972 mean_circ: 0.942097
Ran for 279050 frames Cell Events: 6988 mean_circ: 0.942091
Ran for 279550 frames Cell Events: 7004 mean_circ: 0.9421
Ran for 280050 frames Cell Events: 7012 mean_circ: 0.942114
Ran for 281050 frames Cell Events: 7030 mean_circ: 0.942135
Ran for 281550 frames Cell Events: 7046 mean_circ: 0.942135
Ran for 282050 frames Cell Events: 7060 mean_circ: 0.942126
Ran for 282550 frames Cell Events: 7073 mean_circ: 0.942142
Ran for 283550 frames Cell Events: 7100 mean_circ: 0.942178
Ran for 285550 frames Cell Events: 7127 mean_circ: 0.942228
Ran for 286050 frames Cell Events: 7136 mean_circ: 0.942155
Ran for 286550 frames Cell Events: 7146 mean_circ: 0.942127
Ran for 287050 frames Cell Events: 7158 mean_circ: 0.942125
Ran for 287550 frames Cell Events: 7167 mean_circ: 0.942127
Ran for 288050 frames Cell Events: 7183 mean_circ: 0.94215
Ran for 289050 frames Cell Events: 7197 mean_circ: 0.942152
Ran for 289550 frames Cell Events: 7208 mean_circ: 0.942143
Ran for 290050 frames Cell Events: 7224 mean_circ: 0.942138
Ran for 290550 frames Cell Events: 7230 mean_circ: 0.942144
Ran for 291050 frames Cell Events: 7245 mean_circ: 0.942157
Ran for 291550 frames Cell Events: 7259 mean_circ: 0.942166
Ran for 292050 frames Cell Events: 7271 mean_circ: 0.942184
Ran for 292550 frames Cell Events: 7287 mean_circ: 0.94219
Ran for 293550 frames Cell Events: 7313 mean_circ: 0.942229
Ran for 294050 frames Cell Events: 7324 mean_circ: 0.942224
Ran for 294550 frames Cell Events: 7332 mean_circ: 0.942231
Ran for 295050 frames Cell Events: 7340 mean_circ: 0.942216
Ran for 295550 frames Cell Events: 7349 mean_circ: 0.942197
Ran for 296050 frames Cell Events: 7368 mean_circ: 0.942214
Ran for 297550 frames Cell Events: 7420 mean_circ: 0.942164
Ran for 298050 frames Cell Events: 7433 mean_circ: 0.942146
Ran for 298550 frames Cell Events: 7438 mean_circ: 0.942146
Ran for 299050 frames Cell Events: 7444 mean_circ: 0.942144
Ran for 300050 frames Cell Events: 7470 mean_circ: 0.942161
Ran for 300550 frames Cell Events: 7491 mean_circ: 0.942144
Ran for 301050 frames Cell Events: 7503 mean_circ: 0.942122
Ran for 301550 frames Cell Events: 7512 mean_circ: 0.942055
Ran for 302050 frames Cell Events: 7525 mean_circ: 0.942047
Ran for 302550 frames Cell Events: 7532 mean_circ: 0.942053
Ran for 303050 frames Cell Events: 7551 mean_circ: 0.942073
Ran for 304050 frames Cell Events: 7571 mean_circ: 0.942102
Ran for 304550 frames Cell Events: 7578 mean_circ: 0.942113
Ran for 305550 frames Cell Events: 7619 mean_circ: 0.942112
Ran for 306550 frames Cell Events: 7642 mean_circ: 0.942092
Ran for 307550 frames Cell Events: 7662 mean_circ: 0.942051
Ran for 308050 frames Cell Events: 7672 mean_circ: 0.942068
Ran for 308550 frames Cell Events: 7682 mean_circ: 0.942088
Ran for 309550 frames Cell Events: 7706 mean_circ: 0.942078
Ran for 310550 frames Cell Events: 7742 mean_circ: 0.942051
Ran for 311050 frames Cell Events: 7759 mean_circ: 0.942055
Ran for 311550 frames Cell Events: 7778 mean_circ: 0.942048
Ran for 312050 frames Cell Events: 7786 mean_circ: 0.94206
Ran for 312550 frames Cell Events: 7792 mean_circ: 0.942054
Ran for 313050 frames Cell Events: 7802 mean_circ: 0.942049
Ran for 313550 frames Cell Events: 7807 mean_circ: 0.942058
Ran for 314050 frames Cell Events: 7819 mean_circ: 0.942017
Ran for 315050 frames Cell Events: 7843 mean_circ: 0.942037
Ran for 315550 frames Cell Events: 7851 mean_circ: 0.942057
Ran for 316550 frames Cell Events: 7871 mean_circ: 0.942021
Ran for 317050 frames Cell Events: 7886 mean_circ: 0.941993
Ran for 318050 frames Cell Events: 7914 mean_circ: 0.941986
Ran for 318550 frames Cell Events: 7932 mean_circ: 0.942013
Ran for 319050 frames Cell Events: 7948 mean_circ: 0.94202
Ran for 320050 frames Cell Events: 7974 mean_circ: 0.941975
Ran for 320550 frames Cell Events: 7984 mean_circ: 0.941981
Ran for 321050 frames Cell Events: 8001 mean_circ: 0.941958
Ran for 321550 frames Cell Events: 8009 mean_circ: 0.941958
Ran for 322050 frames Cell Events: 8021 mean_circ: 0.941957
Ran for 323050 frames Cell Events: 8064 mean_circ: 0.941969
End this measurment..
Stopping time: 2.18327e+009
****************************************
Measurement finished
Mean Circularitiy: 0.941974
Mean Area: 704.564
Mean FL-1 intensity: 3342.14
Mean FL-2 intensity: 4612.57
Mean FL-3 intensity: 0
frames processed: 321914
Total Time: 161654ms
Number of Runs (new bg img) 0
Frames collected: 323178
Skipped frames: 35969
Rescued Frames: 3175574
Samples DAQ: 80794930
Samples written: 161588864
Samples per Channel: 80794432
FPS: 1999.2
Samples per second: 499800
Expected samples/s: 500000
Events: 8066
Events per second: 49.8968
jumped back (PMT): 5907
#Frames read, frequency
# 0 frames :442527
# 1 frames :183059
# 2 frames :5735
# 3 frames :2492
# 4 frames :1354
# 5 frames :666
# 6 frames :1058
# 7 frames :2191
# 8 frames :1445
# 9 frames :880
# 10 frames :940
# 11 frames :762
# 12 frames :642
# 13 frames :515
# 14 frames :342
# 15 frames :295
# 16 frames :247
# 17 frames :196
# 18 frames :177
# 19 frames :151
# 20 frames :136
# 21 frames :104
# 22 frames :72
# 23 frames :53
# 24 frames :46
# 25 frames :33
# 26 frames :34
# 27 frames :19
# 28 frames :10
# 29 frames :14
# 30 frames :17
# 31 frames :18
# 32 frames :6
# 33 frames :6
# 34 frames :10
# 35 frames :10
# 36 frames :7
# 37 frames :7
# 38 frames :2
# 39 frames :5
# 40 frames :1
# 41 frames :3
# 43 frames :3
# 44 frames :2
# 46 frames :2
# 47 frames :2
# 50 frames :1
# 54 frames :2
# 66 frames :1
# 81 frames :1
M1_para.ini
[General]
Measurement Number = 1
Flow Rate [ul/s] = 0.04
Region = "Channel"
Channel width = 20
Current LED = 100
[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 6
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0
#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 25.3914
parameters.txt
#fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 6
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 300
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0