Click on the log titles below to expand the log entries present in this DC resource.
dclab-export_2024-07-10_17.36.55
{"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc
{
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "948300f827ddb2c644fe39e634bb86aa",
"name": "M1_20170615_1336_dsRNA_Y5_col.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "15:37:20"
}
}
dclab-tdms2rtdc-warnings
LimitingExportSizeWarning
in dclab.rtdc_dataset.export line 305:
Not all features have the same length! Limiting output event count to 10000 (max 10001) in
'10000'.
FG_Config.mcf
[Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;
[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;
[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini
[Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6
[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini
[EVENT LOG] fRT-DC V1.06170206
Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 24.7801
Start pulse train for BG Aquisition..
Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 1.23936e+008
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 1550 frames Cell Events: 31 mean_circ: 0.951125
Ran for 2050 frames Cell Events: 47 mean_circ: 0.948265
Ran for 2550 frames Cell Events: 56 mean_circ: 0.949753
Ran for 3050 frames Cell Events: 75 mean_circ: 0.951791
Ran for 4050 frames Cell Events: 100 mean_circ: 0.950894
Ran for 5550 frames Cell Events: 148 mean_circ: 0.950758
Ran for 6550 frames Cell Events: 176 mean_circ: 0.951845
Ran for 7050 frames Cell Events: 191 mean_circ: 0.951804
Ran for 8050 frames Cell Events: 215 mean_circ: 0.951753
Ran for 8550 frames Cell Events: 228 mean_circ: 0.952389
Ran for 9050 frames Cell Events: 242 mean_circ: 0.953147
Ran for 9550 frames Cell Events: 250 mean_circ: 0.953138
Ran for 10050 frames Cell Events: 260 mean_circ: 0.952744
Ran for 10550 frames Cell Events: 276 mean_circ: 0.953223
Ran for 11050 frames Cell Events: 290 mean_circ: 0.951514
Ran for 11550 frames Cell Events: 302 mean_circ: 0.951367
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Ran for 12550 frames Cell Events: 324 mean_circ: 0.951431
Ran for 14050 frames Cell Events: 360 mean_circ: 0.951405
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Ran for 16050 frames Cell Events: 410 mean_circ: 0.951394
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Ran for 34550 frames Cell Events: 896 mean_circ: 0.950332
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Ran for 36550 frames Cell Events: 954 mean_circ: 0.949903
Ran for 37550 frames Cell Events: 1000 mean_circ: 0.94982
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Ran for 67050 frames Cell Events: 1809 mean_circ: 0.949989
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Ran for 69550 frames Cell Events: 1865 mean_circ: 0.950112
Ran for 71050 frames Cell Events: 1902 mean_circ: 0.950111
Ran for 71550 frames Cell Events: 1912 mean_circ: 0.950008
Ran for 72050 frames Cell Events: 1923 mean_circ: 0.949975
Ran for 72550 frames Cell Events: 1934 mean_circ: 0.949976
Ran for 73550 frames Cell Events: 1965 mean_circ: 0.950079
Ran for 74050 frames Cell Events: 1978 mean_circ: 0.950043
Ran for 74550 frames Cell Events: 1994 mean_circ: 0.950023
Ran for 75550 frames Cell Events: 2021 mean_circ: 0.950077
Ran for 76550 frames Cell Events: 2053 mean_circ: 0.949996
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Ran for 81050 frames Cell Events: 2178 mean_circ: 0.950255
Ran for 81550 frames Cell Events: 2192 mean_circ: 0.950204
Ran for 82050 frames Cell Events: 2211 mean_circ: 0.950106
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Ran for 84050 frames Cell Events: 2268 mean_circ: 0.950136
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Ran for 85050 frames Cell Events: 2295 mean_circ: 0.950065
Ran for 85550 frames Cell Events: 2309 mean_circ: 0.950141
Ran for 86050 frames Cell Events: 2323 mean_circ: 0.950182
Ran for 87050 frames Cell Events: 2360 mean_circ: 0.950089
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Ran for 90550 frames Cell Events: 2476 mean_circ: 0.949668
Ran for 91050 frames Cell Events: 2486 mean_circ: 0.949692
Ran for 91550 frames Cell Events: 2500 mean_circ: 0.949734
Ran for 92050 frames Cell Events: 2511 mean_circ: 0.949685
Ran for 92550 frames Cell Events: 2524 mean_circ: 0.949686
Ran for 93050 frames Cell Events: 2542 mean_circ: 0.949685
Ran for 93550 frames Cell Events: 2552 mean_circ: 0.949713
Ran for 94050 frames Cell Events: 2566 mean_circ: 0.949783
Ran for 94550 frames Cell Events: 2582 mean_circ: 0.94973
Ran for 95550 frames Cell Events: 2616 mean_circ: 0.949805
Ran for 96050 frames Cell Events: 2626 mean_circ: 0.949826
Ran for 96550 frames Cell Events: 2640 mean_circ: 0.949787
Ran for 97050 frames Cell Events: 2646 mean_circ: 0.94981
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Ran for 98050 frames Cell Events: 2667 mean_circ: 0.949816
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Ran for 99550 frames Cell Events: 2705 mean_circ: 0.949902
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Ran for 101050 frames Cell Events: 2743 mean_circ: 0.949976
Ran for 102050 frames Cell Events: 2772 mean_circ: 0.949916
Ran for 102550 frames Cell Events: 2787 mean_circ: 0.94995
Ran for 103050 frames Cell Events: 2795 mean_circ: 0.949955
Ran for 103550 frames Cell Events: 2806 mean_circ: 0.94994
Ran for 104050 frames Cell Events: 2821 mean_circ: 0.949949
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Ran for 105550 frames Cell Events: 2865 mean_circ: 0.949887
Ran for 106050 frames Cell Events: 2873 mean_circ: 0.94998
Ran for 106550 frames Cell Events: 2890 mean_circ: 0.949997
Ran for 108050 frames Cell Events: 2942 mean_circ: 0.950088
Ran for 108550 frames Cell Events: 2964 mean_circ: 0.950081
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Ran for 111050 frames Cell Events: 3029 mean_circ: 0.950075
Ran for 111550 frames Cell Events: 3037 mean_circ: 0.950042
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Ran for 112550 frames Cell Events: 3052 mean_circ: 0.95004
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Ran for 113550 frames Cell Events: 3069 mean_circ: 0.950011
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Ran for 116550 frames Cell Events: 3147 mean_circ: 0.950098
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Ran for 120050 frames Cell Events: 3247 mean_circ: 0.950062
Ran for 120550 frames Cell Events: 3259 mean_circ: 0.950095
Ran for 121550 frames Cell Events: 3291 mean_circ: 0.950129
Ran for 122050 frames Cell Events: 3303 mean_circ: 0.950091
Ran for 122550 frames Cell Events: 3324 mean_circ: 0.950138
Ran for 123050 frames Cell Events: 3329 mean_circ: 0.950136
Ran for 123550 frames Cell Events: 3343 mean_circ: 0.950182
Ran for 124050 frames Cell Events: 3356 mean_circ: 0.950231
Ran for 124550 frames Cell Events: 3371 mean_circ: 0.950237
Ran for 125050 frames Cell Events: 3384 mean_circ: 0.950273
Ran for 125550 frames Cell Events: 3402 mean_circ: 0.950245
Ran for 126550 frames Cell Events: 3421 mean_circ: 0.950187
Ran for 127050 frames Cell Events: 3438 mean_circ: 0.950222
Ran for 127550 frames Cell Events: 3452 mean_circ: 0.950203
Ran for 128050 frames Cell Events: 3462 mean_circ: 0.950238
Ran for 130550 frames Cell Events: 3531 mean_circ: 0.950206
Ran for 131050 frames Cell Events: 3544 mean_circ: 0.95023
Ran for 131550 frames Cell Events: 3556 mean_circ: 0.950161
Ran for 132550 frames Cell Events: 3587 mean_circ: 0.950197
Ran for 133050 frames Cell Events: 3603 mean_circ: 0.950192
Ran for 134050 frames Cell Events: 3623 mean_circ: 0.950191
Ran for 135050 frames Cell Events: 3652 mean_circ: 0.950156
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Ran for 136050 frames Cell Events: 3675 mean_circ: 0.95017
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Ran for 140050 frames Cell Events: 3768 mean_circ: 0.950036
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Ran for 141050 frames Cell Events: 3782 mean_circ: 0.950027
Ran for 142050 frames Cell Events: 3810 mean_circ: 0.950038
Ran for 142550 frames Cell Events: 3822 mean_circ: 0.950061
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Ran for 147050 frames Cell Events: 3949 mean_circ: 0.95022
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Ran for 162550 frames Cell Events: 4359 mean_circ: 0.950188
Ran for 163050 frames Cell Events: 4363 mean_circ: 0.950202
Ran for 163550 frames Cell Events: 4385 mean_circ: 0.950104
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Ran for 166050 frames Cell Events: 4452 mean_circ: 0.950034
Ran for 167050 frames Cell Events: 4472 mean_circ: 0.950001
Ran for 167550 frames Cell Events: 4489 mean_circ: 0.950024
Ran for 168050 frames Cell Events: 4504 mean_circ: 0.950027
Ran for 168550 frames Cell Events: 4517 mean_circ: 0.950008
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Ran for 171050 frames Cell Events: 4603 mean_circ: 0.949947
Ran for 171550 frames Cell Events: 4620 mean_circ: 0.949956
Ran for 172050 frames Cell Events: 4638 mean_circ: 0.949998
Ran for 172550 frames Cell Events: 4650 mean_circ: 0.949977
Ran for 173550 frames Cell Events: 4677 mean_circ: 0.950009
Ran for 174050 frames Cell Events: 4693 mean_circ: 0.950016
Ran for 175050 frames Cell Events: 4721 mean_circ: 0.949992
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Ran for 176050 frames Cell Events: 4752 mean_circ: 0.949914
Ran for 176550 frames Cell Events: 4764 mean_circ: 0.94994
Ran for 177050 frames Cell Events: 4773 mean_circ: 0.949951
Ran for 178550 frames Cell Events: 4808 mean_circ: 0.949905
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Ran for 180050 frames Cell Events: 4842 mean_circ: 0.949975
Ran for 180550 frames Cell Events: 4861 mean_circ: 0.949915
Ran for 181050 frames Cell Events: 4877 mean_circ: 0.949943
Ran for 182050 frames Cell Events: 4904 mean_circ: 0.949928
Ran for 182550 frames Cell Events: 4917 mean_circ: 0.949939
Ran for 183550 frames Cell Events: 4955 mean_circ: 0.949946
Ran for 184050 frames Cell Events: 4971 mean_circ: 0.949941
Ran for 184550 frames Cell Events: 4985 mean_circ: 0.94996
Ran for 186050 frames Cell Events: 5030 mean_circ: 0.950034
Ran for 187050 frames Cell Events: 5066 mean_circ: 0.950027
Ran for 188050 frames Cell Events: 5090 mean_circ: 0.950044
Ran for 188550 frames Cell Events: 5103 mean_circ: 0.950061
Ran for 189050 frames Cell Events: 5124 mean_circ: 0.950088
Ran for 189550 frames Cell Events: 5137 mean_circ: 0.950071
Ran for 190050 frames Cell Events: 5149 mean_circ: 0.950087
Ran for 190550 frames Cell Events: 5165 mean_circ: 0.950086
Ran for 191050 frames Cell Events: 5174 mean_circ: 0.950091
Ran for 191550 frames Cell Events: 5188 mean_circ: 0.950094
Ran for 192050 frames Cell Events: 5205 mean_circ: 0.950062
Ran for 192550 frames Cell Events: 5218 mean_circ: 0.950052
Ran for 193050 frames Cell Events: 5233 mean_circ: 0.950054
Ran for 193550 frames Cell Events: 5248 mean_circ: 0.950085
Ran for 194050 frames Cell Events: 5272 mean_circ: 0.950042
Ran for 196050 frames Cell Events: 5330 mean_circ: 0.950054
Ran for 197050 frames Cell Events: 5357 mean_circ: 0.950044
Ran for 198050 frames Cell Events: 5384 mean_circ: 0.950015
Ran for 199050 frames Cell Events: 5408 mean_circ: 0.950044
Ran for 200050 frames Cell Events: 5434 mean_circ: 0.950037
Ran for 200550 frames Cell Events: 5445 mean_circ: 0.950046
Ran for 202550 frames Cell Events: 5495 mean_circ: 0.950039
Ran for 203550 frames Cell Events: 5528 mean_circ: 0.950066
Ran for 204050 frames Cell Events: 5548 mean_circ: 0.9501
Ran for 204550 frames Cell Events: 5567 mean_circ: 0.950063
Ran for 205050 frames Cell Events: 5581 mean_circ: 0.950058
Ran for 205550 frames Cell Events: 5594 mean_circ: 0.950072
Ran for 206050 frames Cell Events: 5617 mean_circ: 0.95007
Ran for 207050 frames Cell Events: 5643 mean_circ: 0.950078
Ran for 207550 frames Cell Events: 5654 mean_circ: 0.950065
Ran for 208050 frames Cell Events: 5664 mean_circ: 0.950079
Ran for 208550 frames Cell Events: 5674 mean_circ: 0.950049
Ran for 209050 frames Cell Events: 5694 mean_circ: 0.950078
Ran for 209550 frames Cell Events: 5703 mean_circ: 0.950081
Ran for 210050 frames Cell Events: 5710 mean_circ: 0.950077
Ran for 211050 frames Cell Events: 5734 mean_circ: 0.950095
Ran for 211550 frames Cell Events: 5751 mean_circ: 0.950112
Ran for 212550 frames Cell Events: 5780 mean_circ: 0.95011
Ran for 213550 frames Cell Events: 5805 mean_circ: 0.950124
Ran for 214050 frames Cell Events: 5817 mean_circ: 0.950136
Ran for 216050 frames Cell Events: 5888 mean_circ: 0.95019
Ran for 216550 frames Cell Events: 5904 mean_circ: 0.950202
Ran for 217050 frames Cell Events: 5915 mean_circ: 0.950198
Ran for 217550 frames Cell Events: 5928 mean_circ: 0.950228
Ran for 218050 frames Cell Events: 5937 mean_circ: 0.950187
Ran for 218550 frames Cell Events: 5953 mean_circ: 0.950172
Ran for 219050 frames Cell Events: 5963 mean_circ: 0.950177
Ran for 220050 frames Cell Events: 5981 mean_circ: 0.950157
Ran for 221050 frames Cell Events: 6018 mean_circ: 0.950171
Ran for 221550 frames Cell Events: 6035 mean_circ: 0.950156
Ran for 222050 frames Cell Events: 6045 mean_circ: 0.950148
Ran for 223550 frames Cell Events: 6092 mean_circ: 0.950143
Ran for 224050 frames Cell Events: 6106 mean_circ: 0.95015
Ran for 224550 frames Cell Events: 6113 mean_circ: 0.95017
Ran for 226050 frames Cell Events: 6163 mean_circ: 0.950227
Ran for 226550 frames Cell Events: 6178 mean_circ: 0.950222
Ran for 227050 frames Cell Events: 6195 mean_circ: 0.950235
Ran for 229550 frames Cell Events: 6257 mean_circ: 0.950204
Ran for 230550 frames Cell Events: 6287 mean_circ: 0.950162
Ran for 231050 frames Cell Events: 6305 mean_circ: 0.950176
Ran for 231550 frames Cell Events: 6321 mean_circ: 0.950129
Ran for 232550 frames Cell Events: 6350 mean_circ: 0.95014
Ran for 234050 frames Cell Events: 6393 mean_circ: 0.950145
Ran for 234550 frames Cell Events: 6408 mean_circ: 0.950152
Ran for 235550 frames Cell Events: 6432 mean_circ: 0.950172
Ran for 236550 frames Cell Events: 6455 mean_circ: 0.95016
Ran for 237050 frames Cell Events: 6463 mean_circ: 0.950164
Ran for 238050 frames Cell Events: 6493 mean_circ: 0.95014
Ran for 238550 frames Cell Events: 6504 mean_circ: 0.950124
Ran for 239050 frames Cell Events: 6516 mean_circ: 0.950119
Ran for 239550 frames Cell Events: 6526 mean_circ: 0.950112
Ran for 240050 frames Cell Events: 6545 mean_circ: 0.950098
Ran for 240550 frames Cell Events: 6555 mean_circ: 0.950102
Ran for 241550 frames Cell Events: 6576 mean_circ: 0.950106
Ran for 242050 frames Cell Events: 6587 mean_circ: 0.950112
Ran for 242550 frames Cell Events: 6593 mean_circ: 0.950126
Ran for 243550 frames Cell Events: 6616 mean_circ: 0.950144
Ran for 244550 frames Cell Events: 6652 mean_circ: 0.95018
Ran for 245050 frames Cell Events: 6659 mean_circ: 0.950185
Ran for 246550 frames Cell Events: 6698 mean_circ: 0.950175
Ran for 247550 frames Cell Events: 6726 mean_circ: 0.95017
Ran for 248050 frames Cell Events: 6737 mean_circ: 0.950174
Ran for 248550 frames Cell Events: 6750 mean_circ: 0.950176
Ran for 249050 frames Cell Events: 6766 mean_circ: 0.950189
Ran for 250050 frames Cell Events: 6798 mean_circ: 0.950202
Ran for 250550 frames Cell Events: 6808 mean_circ: 0.950213
Ran for 251050 frames Cell Events: 6815 mean_circ: 0.950204
Ran for 251550 frames Cell Events: 6828 mean_circ: 0.950188
Ran for 252050 frames Cell Events: 6843 mean_circ: 0.950191
Ran for 252550 frames Cell Events: 6855 mean_circ: 0.950166
Ran for 253050 frames Cell Events: 6870 mean_circ: 0.950168
Ran for 253550 frames Cell Events: 6878 mean_circ: 0.950169
Ran for 254050 frames Cell Events: 6899 mean_circ: 0.950196
Ran for 254550 frames Cell Events: 6918 mean_circ: 0.950171
Ran for 255050 frames Cell Events: 6928 mean_circ: 0.950164
Ran for 255550 frames Cell Events: 6946 mean_circ: 0.950183
Ran for 256050 frames Cell Events: 6956 mean_circ: 0.950183
Ran for 256550 frames Cell Events: 6975 mean_circ: 0.950179
Ran for 257050 frames Cell Events: 6989 mean_circ: 0.950192
Ran for 257550 frames Cell Events: 7003 mean_circ: 0.95021
Ran for 258050 frames Cell Events: 7019 mean_circ: 0.950223
Ran for 259550 frames Cell Events: 7049 mean_circ: 0.950261
Ran for 260050 frames Cell Events: 7060 mean_circ: 0.950282
Ran for 260550 frames Cell Events: 7082 mean_circ: 0.950262
Ran for 261050 frames Cell Events: 7096 mean_circ: 0.950262
Ran for 261550 frames Cell Events: 7112 mean_circ: 0.950261
Ran for 262050 frames Cell Events: 7127 mean_circ: 0.950274
Ran for 262550 frames Cell Events: 7135 mean_circ: 0.950281
Ran for 263050 frames Cell Events: 7156 mean_circ: 0.950308
Ran for 263550 frames Cell Events: 7166 mean_circ: 0.950295
Ran for 264550 frames Cell Events: 7204 mean_circ: 0.95027
Ran for 265550 frames Cell Events: 7237 mean_circ: 0.950294
Ran for 266550 frames Cell Events: 7260 mean_circ: 0.9503
Ran for 267550 frames Cell Events: 7285 mean_circ: 0.950266
Ran for 268550 frames Cell Events: 7307 mean_circ: 0.950221
Ran for 269050 frames Cell Events: 7316 mean_circ: 0.950229
Ran for 269550 frames Cell Events: 7330 mean_circ: 0.950239
Ran for 270550 frames Cell Events: 7355 mean_circ: 0.950231
Ran for 271050 frames Cell Events: 7367 mean_circ: 0.950197
Ran for 271550 frames Cell Events: 7375 mean_circ: 0.950182
Ran for 272550 frames Cell Events: 7389 mean_circ: 0.95018
Ran for 273550 frames Cell Events: 7408 mean_circ: 0.950203
Ran for 275050 frames Cell Events: 7448 mean_circ: 0.950231
Ran for 275550 frames Cell Events: 7458 mean_circ: 0.950244
Ran for 276050 frames Cell Events: 7473 mean_circ: 0.950248
Ran for 276550 frames Cell Events: 7487 mean_circ: 0.950239
Ran for 277550 frames Cell Events: 7515 mean_circ: 0.950255
Ran for 278050 frames Cell Events: 7525 mean_circ: 0.950266
Ran for 278550 frames Cell Events: 7539 mean_circ: 0.950275
Ran for 279050 frames Cell Events: 7554 mean_circ: 0.950296
Ran for 279550 frames Cell Events: 7568 mean_circ: 0.950311
Ran for 280050 frames Cell Events: 7583 mean_circ: 0.950316
Ran for 281050 frames Cell Events: 7613 mean_circ: 0.950326
Ran for 281550 frames Cell Events: 7627 mean_circ: 0.950338
Ran for 282050 frames Cell Events: 7642 mean_circ: 0.950335
Ran for 283050 frames Cell Events: 7681 mean_circ: 0.950302
Ran for 283550 frames Cell Events: 7697 mean_circ: 0.950321
Ran for 284050 frames Cell Events: 7709 mean_circ: 0.950333
Ran for 284550 frames Cell Events: 7718 mean_circ: 0.950342
Ran for 285050 frames Cell Events: 7731 mean_circ: 0.950336
Ran for 285550 frames Cell Events: 7746 mean_circ: 0.950338
Ran for 286050 frames Cell Events: 7758 mean_circ: 0.950351
Ran for 286550 frames Cell Events: 7771 mean_circ: 0.95032
Ran for 287050 frames Cell Events: 7783 mean_circ: 0.95032
Ran for 288550 frames Cell Events: 7834 mean_circ: 0.950346
Ran for 289050 frames Cell Events: 7857 mean_circ: 0.950335
Ran for 289550 frames Cell Events: 7873 mean_circ: 0.950336
Ran for 290050 frames Cell Events: 7886 mean_circ: 0.950334
Ran for 290550 frames Cell Events: 7899 mean_circ: 0.950328
Ran for 291550 frames Cell Events: 7926 mean_circ: 0.950327
Ran for 292050 frames Cell Events: 7937 mean_circ: 0.950314
Ran for 292550 frames Cell Events: 7945 mean_circ: 0.950313
Ran for 293050 frames Cell Events: 7960 mean_circ: 0.950314
Ran for 293550 frames Cell Events: 7971 mean_circ: 0.950303
Ran for 294050 frames Cell Events: 7981 mean_circ: 0.950314
Ran for 294550 frames Cell Events: 7996 mean_circ: 0.950201
Ran for 295050 frames Cell Events: 8016 mean_circ: 0.950204
Ran for 295550 frames Cell Events: 8025 mean_circ: 0.950208
Ran for 296050 frames Cell Events: 8043 mean_circ: 0.950219
Ran for 297050 frames Cell Events: 8068 mean_circ: 0.950222
Ran for 297550 frames Cell Events: 8080 mean_circ: 0.950214
Ran for 298550 frames Cell Events: 8116 mean_circ: 0.950236
Ran for 299050 frames Cell Events: 8130 mean_circ: 0.950243
Ran for 299550 frames Cell Events: 8144 mean_circ: 0.950244
Ran for 300050 frames Cell Events: 8155 mean_circ: 0.950246
Ran for 300550 frames Cell Events: 8170 mean_circ: 0.950277
Ran for 301050 frames Cell Events: 8183 mean_circ: 0.950295
Ran for 302050 frames Cell Events: 8214 mean_circ: 0.950313
Ran for 302550 frames Cell Events: 8231 mean_circ: 0.950307
Ran for 303550 frames Cell Events: 8259 mean_circ: 0.950288
Ran for 304050 frames Cell Events: 8272 mean_circ: 0.950259
Ran for 304550 frames Cell Events: 8287 mean_circ: 0.950267
Ran for 305550 frames Cell Events: 8312 mean_circ: 0.950274
Ran for 306050 frames Cell Events: 8323 mean_circ: 0.950284
Ran for 306550 frames Cell Events: 8344 mean_circ: 0.950298
Ran for 307050 frames Cell Events: 8358 mean_circ: 0.950289
Ran for 307550 frames Cell Events: 8376 mean_circ: 0.950296
Ran for 308050 frames Cell Events: 8391 mean_circ: 0.950302
Ran for 308550 frames Cell Events: 8405 mean_circ: 0.950307
Ran for 309050 frames Cell Events: 8420 mean_circ: 0.95032
Ran for 309550 frames Cell Events: 8446 mean_circ: 0.950311
Ran for 310550 frames Cell Events: 8478 mean_circ: 0.950301
Ran for 311050 frames Cell Events: 8491 mean_circ: 0.950288
Ran for 311550 frames Cell Events: 8504 mean_circ: 0.950296
Ran for 312050 frames Cell Events: 8525 mean_circ: 0.950313
Ran for 312550 frames Cell Events: 8541 mean_circ: 0.950291
Ran for 313050 frames Cell Events: 8559 mean_circ: 0.950304
Ran for 313550 frames Cell Events: 8577 mean_circ: 0.950282
Ran for 314050 frames Cell Events: 8592 mean_circ: 0.950269
Ran for 315050 frames Cell Events: 8617 mean_circ: 0.950287
Ran for 315550 frames Cell Events: 8634 mean_circ: 0.950293
Ran for 316550 frames Cell Events: 8676 mean_circ: 0.950275
Ran for 317050 frames Cell Events: 8697 mean_circ: 0.950253
Ran for 318050 frames Cell Events: 8722 mean_circ: 0.950265
Ran for 318550 frames Cell Events: 8734 mean_circ: 0.950269
Ran for 319050 frames Cell Events: 8742 mean_circ: 0.950253
Ran for 319550 frames Cell Events: 8752 mean_circ: 0.950263
Ran for 320550 frames Cell Events: 8775 mean_circ: 0.950254
Ran for 321050 frames Cell Events: 8787 mean_circ: 0.950281
Ran for 321550 frames Cell Events: 8799 mean_circ: 0.950298
Ran for 322050 frames Cell Events: 8813 mean_circ: 0.950303
Ran for 322550 frames Cell Events: 8830 mean_circ: 0.950316
Ran for 323050 frames Cell Events: 8844 mean_circ: 0.950305
Ran for 323550 frames Cell Events: 8857 mean_circ: 0.950287
Ran for 324050 frames Cell Events: 8865 mean_circ: 0.950287
Ran for 325050 frames Cell Events: 8884 mean_circ: 0.950301
Ran for 325550 frames Cell Events: 8896 mean_circ: 0.950305
Ran for 326050 frames Cell Events: 8908 mean_circ: 0.950293
Ran for 326550 frames Cell Events: 8922 mean_circ: 0.950291
Ran for 327050 frames Cell Events: 8944 mean_circ: 0.950287
Ran for 328050 frames Cell Events: 8974 mean_circ: 0.950303
Ran for 328550 frames Cell Events: 8983 mean_circ: 0.950292
Ran for 329050 frames Cell Events: 8995 mean_circ: 0.950304
Ran for 329550 frames Cell Events: 9011 mean_circ: 0.950282
Ran for 330050 frames Cell Events: 9017 mean_circ: 0.950294
Ran for 330550 frames Cell Events: 9031 mean_circ: 0.950292
Ran for 331050 frames Cell Events: 9041 mean_circ: 0.950293
Ran for 331550 frames Cell Events: 9053 mean_circ: 0.95031
Ran for 333550 frames Cell Events: 9126 mean_circ: 0.950319
Ran for 334050 frames Cell Events: 9141 mean_circ: 0.950309
Ran for 335050 frames Cell Events: 9167 mean_circ: 0.950328
Ran for 336050 frames Cell Events: 9189 mean_circ: 0.950314
Ran for 337050 frames Cell Events: 9228 mean_circ: 0.950307
Ran for 337550 frames Cell Events: 9249 mean_circ: 0.950313
Ran for 339550 frames Cell Events: 9307 mean_circ: 0.950223
Ran for 340550 frames Cell Events: 9336 mean_circ: 0.950236
Ran for 341550 frames Cell Events: 9373 mean_circ: 0.950227
Ran for 342050 frames Cell Events: 9390 mean_circ: 0.950225
Ran for 342550 frames Cell Events: 9400 mean_circ: 0.950217
Ran for 343050 frames Cell Events: 9414 mean_circ: 0.950213
Ran for 343550 frames Cell Events: 9436 mean_circ: 0.950229
Ran for 344050 frames Cell Events: 9449 mean_circ: 0.95025
Ran for 344550 frames Cell Events: 9468 mean_circ: 0.950255
Ran for 345050 frames Cell Events: 9489 mean_circ: 0.950198
Ran for 345550 frames Cell Events: 9505 mean_circ: 0.95021
Ran for 346050 frames Cell Events: 9523 mean_circ: 0.950219
Ran for 346550 frames Cell Events: 9548 mean_circ: 0.950219
Ran for 348050 frames Cell Events: 9596 mean_circ: 0.95024
Ran for 348550 frames Cell Events: 9612 mean_circ: 0.950242
Ran for 350050 frames Cell Events: 9662 mean_circ: 0.950266
Ran for 352550 frames Cell Events: 9738 mean_circ: 0.950292
Ran for 353050 frames Cell Events: 9752 mean_circ: 0.950262
Ran for 353550 frames Cell Events: 9772 mean_circ: 0.950254
Ran for 354050 frames Cell Events: 9785 mean_circ: 0.950273
Ran for 354550 frames Cell Events: 9808 mean_circ: 0.950283
Ran for 355050 frames Cell Events: 9825 mean_circ: 0.950293
Ran for 356050 frames Cell Events: 9859 mean_circ: 0.950288
Ran for 356550 frames Cell Events: 9870 mean_circ: 0.95029
Ran for 357050 frames Cell Events: 9880 mean_circ: 0.950305
Ran for 357550 frames Cell Events: 9896 mean_circ: 0.950304
Ran for 358050 frames Cell Events: 9910 mean_circ: 0.950316
Ran for 358550 frames Cell Events: 9924 mean_circ: 0.950297
Ran for 359550 frames Cell Events: 9961 mean_circ: 0.950298
Ran for 360050 frames Cell Events: 9970 mean_circ: 0.950285
Ran for 360550 frames Cell Events: 9989 mean_circ: 0.95028
End this measurment.
because stop condition (time/nr of cells) was met
Stopping time: 1.24117e+008
****************************************
Measurement finished
Mean Circularitiy: 0.950281
Mean Area: 589.093
Mean FL-1 intensity: 3152.21
Mean FL-2 intensity: 3486.37
Mean FL-3 intensity: 0
frames processed: 360875
Total Time: 180614ms
Number of Runs (new bg img) 0
Frames collected: 361068
Skipped frames: 3875
Rescued Frames: 493604
Samples DAQ: 90267171
Samples written: 180533716
Samples per Channel: 90266858
FPS: 1999.12
Samples per second: 499778
Expected samples/s: 500000
Events: 10001
Events per second: 55.3723
jumped back (PMT): 7875
#Frames read, frequency
# 0 frames :485669
# 1 frames :212122
# 2 frames :7231
# 3 frames :2847
# 4 frames :1402
# 5 frames :530
# 6 frames :2420
# 7 frames :2350
# 8 frames :1462
# 9 frames :724
# 10 frames :1764
# 11 frames :850
# 12 frames :759
# 13 frames :390
# 14 frames :323
# 15 frames :244
# 16 frames :264
# 17 frames :228
# 18 frames :139
# 19 frames :78
# 20 frames :63
# 21 frames :40
# 22 frames :41
# 23 frames :28
# 24 frames :22
# 25 frames :16
# 26 frames :14
# 27 frames :11
# 28 frames :11
# 29 frames :8
# 30 frames :2
# 31 frames :7
# 32 frames :4
# 33 frames :4
# 34 frames :1
# 35 frames :2
# 36 frames :2
# 37 frames :2
# 38 frames :3
# 39 frames :1
# 40 frames :3
# 41 frames :1
# 59 frames :1
# 67 frames :2
M1_para.ini
[General]
Measurement Number = 1
Flow Rate [ul/s] = 0.04
Region = "Channel"
Channel width = 20
Current LED = 100
[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 6
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0
#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 24.7801
parameters.txt
#fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 6
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 300
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0