Click on the log titles below to expand the log entries present in this DC resource.
dclab-export_2024-07-10_17.23.43
{"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc
{
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "aafd6e2a08237f4d5f179289fbfdd309",
"name": "M1_20170613_1742_dsRNA_Y7_col.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "15:24:04"
}
}
dclab-tdms2rtdc-warnings
LimitingExportSizeWarning
in dclab.rtdc_dataset.export line 305:
Not all features have the same length! Limiting output event count to 8139 (max 8140) in '8139'.
FG_Config.mcf
[Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;
[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;
[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini
[Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6
[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini
[EVENT LOG] fRT-DC V1.06170206
Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 24.6571
Start pulse train for BG Aquisition..
Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 2.53916e+009
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 550 frames Cell Events: 9 mean_circ: 0.954529
Ran for 1550 frames Cell Events: 33 mean_circ: 0.945795
Ran for 2050 frames Cell Events: 45 mean_circ: 0.943452
Ran for 3550 frames Cell Events: 84 mean_circ: 0.949479
Ran for 4050 frames Cell Events: 104 mean_circ: 0.950091
Ran for 4550 frames Cell Events: 121 mean_circ: 0.949278
Ran for 5050 frames Cell Events: 135 mean_circ: 0.948637
Ran for 5550 frames Cell Events: 146 mean_circ: 0.948748
Ran for 6050 frames Cell Events: 157 mean_circ: 0.94854
Ran for 6550 frames Cell Events: 164 mean_circ: 0.94867
Ran for 7050 frames Cell Events: 173 mean_circ: 0.947837
Ran for 7550 frames Cell Events: 185 mean_circ: 0.947039
Ran for 8050 frames Cell Events: 206 mean_circ: 0.947268
Ran for 8550 frames Cell Events: 221 mean_circ: 0.948201
Ran for 9550 frames Cell Events: 241 mean_circ: 0.948295
Ran for 10550 frames Cell Events: 262 mean_circ: 0.947627
Ran for 11050 frames Cell Events: 273 mean_circ: 0.948078
Ran for 11550 frames Cell Events: 284 mean_circ: 0.948223
Ran for 12050 frames Cell Events: 293 mean_circ: 0.948467
Ran for 12550 frames Cell Events: 299 mean_circ: 0.948884
Ran for 13050 frames Cell Events: 314 mean_circ: 0.948608
Ran for 13550 frames Cell Events: 324 mean_circ: 0.948527
Ran for 14050 frames Cell Events: 334 mean_circ: 0.948258
Ran for 15050 frames Cell Events: 353 mean_circ: 0.948154
Ran for 15550 frames Cell Events: 361 mean_circ: 0.948445
Ran for 16550 frames Cell Events: 388 mean_circ: 0.948839
Ran for 17050 frames Cell Events: 395 mean_circ: 0.948857
Ran for 17550 frames Cell Events: 413 mean_circ: 0.948241
Ran for 18050 frames Cell Events: 422 mean_circ: 0.948036
Ran for 18550 frames Cell Events: 429 mean_circ: 0.948375
Ran for 19050 frames Cell Events: 437 mean_circ: 0.948735
Ran for 20050 frames Cell Events: 458 mean_circ: 0.94861
Ran for 20550 frames Cell Events: 472 mean_circ: 0.948361
Ran for 21050 frames Cell Events: 484 mean_circ: 0.948366
Ran for 22550 frames Cell Events: 514 mean_circ: 0.948079
Ran for 23050 frames Cell Events: 523 mean_circ: 0.948193
Ran for 23550 frames Cell Events: 526 mean_circ: 0.94804
Ran for 25050 frames Cell Events: 552 mean_circ: 0.947375
Ran for 25550 frames Cell Events: 562 mean_circ: 0.947056
Ran for 26050 frames Cell Events: 570 mean_circ: 0.947341
Ran for 26550 frames Cell Events: 584 mean_circ: 0.947468
Ran for 27550 frames Cell Events: 612 mean_circ: 0.94739
Ran for 28050 frames Cell Events: 620 mean_circ: 0.947529
Ran for 28550 frames Cell Events: 629 mean_circ: 0.947749
Ran for 29550 frames Cell Events: 650 mean_circ: 0.947929
Ran for 30550 frames Cell Events: 685 mean_circ: 0.947809
Ran for 31050 frames Cell Events: 694 mean_circ: 0.948154
Ran for 32050 frames Cell Events: 714 mean_circ: 0.948347
Ran for 33050 frames Cell Events: 733 mean_circ: 0.948316
Ran for 33550 frames Cell Events: 737 mean_circ: 0.948369
Ran for 34050 frames Cell Events: 743 mean_circ: 0.948581
Ran for 34550 frames Cell Events: 754 mean_circ: 0.948654
Ran for 35050 frames Cell Events: 767 mean_circ: 0.948624
Ran for 36050 frames Cell Events: 804 mean_circ: 0.947977
Ran for 36550 frames Cell Events: 821 mean_circ: 0.947904
Ran for 37050 frames Cell Events: 836 mean_circ: 0.947934
Ran for 37550 frames Cell Events: 849 mean_circ: 0.947782
Ran for 38050 frames Cell Events: 852 mean_circ: 0.947555
Ran for 38550 frames Cell Events: 858 mean_circ: 0.947472
Ran for 39050 frames Cell Events: 868 mean_circ: 0.947615
Ran for 39550 frames Cell Events: 885 mean_circ: 0.947463
Ran for 40550 frames Cell Events: 909 mean_circ: 0.947236
Ran for 41050 frames Cell Events: 919 mean_circ: 0.947333
Ran for 41550 frames Cell Events: 931 mean_circ: 0.947451
Ran for 42050 frames Cell Events: 944 mean_circ: 0.947335
Ran for 42550 frames Cell Events: 961 mean_circ: 0.94721
Ran for 44050 frames Cell Events: 1005 mean_circ: 0.947291
Ran for 44550 frames Cell Events: 1018 mean_circ: 0.947132
Ran for 45050 frames Cell Events: 1024 mean_circ: 0.947188
Ran for 45550 frames Cell Events: 1037 mean_circ: 0.947175
Ran for 46550 frames Cell Events: 1066 mean_circ: 0.947074
Ran for 47050 frames Cell Events: 1079 mean_circ: 0.946911
Ran for 47550 frames Cell Events: 1093 mean_circ: 0.946884
Ran for 48050 frames Cell Events: 1103 mean_circ: 0.946998
Ran for 49550 frames Cell Events: 1132 mean_circ: 0.947056
Ran for 50050 frames Cell Events: 1142 mean_circ: 0.947054
Ran for 50550 frames Cell Events: 1158 mean_circ: 0.947128
Ran for 51050 frames Cell Events: 1165 mean_circ: 0.947185
Ran for 51550 frames Cell Events: 1179 mean_circ: 0.947142
Ran for 52050 frames Cell Events: 1190 mean_circ: 0.947089
Ran for 52550 frames Cell Events: 1199 mean_circ: 0.947229
Ran for 53050 frames Cell Events: 1218 mean_circ: 0.947249
Ran for 53550 frames Cell Events: 1232 mean_circ: 0.947337
Ran for 54050 frames Cell Events: 1242 mean_circ: 0.947336
Ran for 54550 frames Cell Events: 1255 mean_circ: 0.947379
Ran for 55050 frames Cell Events: 1266 mean_circ: 0.947476
Ran for 56550 frames Cell Events: 1305 mean_circ: 0.947667
Ran for 57050 frames Cell Events: 1314 mean_circ: 0.94757
Ran for 57550 frames Cell Events: 1319 mean_circ: 0.947419
Ran for 58050 frames Cell Events: 1329 mean_circ: 0.947507
Ran for 58550 frames Cell Events: 1340 mean_circ: 0.947507
Ran for 59050 frames Cell Events: 1347 mean_circ: 0.947567
Ran for 60050 frames Cell Events: 1365 mean_circ: 0.947576
Ran for 60550 frames Cell Events: 1382 mean_circ: 0.947616
Ran for 61550 frames Cell Events: 1406 mean_circ: 0.947632
Ran for 62050 frames Cell Events: 1416 mean_circ: 0.947569
Ran for 62550 frames Cell Events: 1422 mean_circ: 0.947579
Ran for 63050 frames Cell Events: 1433 mean_circ: 0.947551
Ran for 63550 frames Cell Events: 1441 mean_circ: 0.94761
Ran for 64050 frames Cell Events: 1451 mean_circ: 0.947659
Ran for 64550 frames Cell Events: 1468 mean_circ: 0.947794
Ran for 65050 frames Cell Events: 1480 mean_circ: 0.947656
Ran for 65550 frames Cell Events: 1501 mean_circ: 0.947595
Ran for 66050 frames Cell Events: 1513 mean_circ: 0.947389
Ran for 66550 frames Cell Events: 1529 mean_circ: 0.947421
Ran for 67050 frames Cell Events: 1540 mean_circ: 0.947371
Ran for 67550 frames Cell Events: 1549 mean_circ: 0.947368
Ran for 68050 frames Cell Events: 1562 mean_circ: 0.947416
Ran for 69050 frames Cell Events: 1588 mean_circ: 0.94725
Ran for 69550 frames Cell Events: 1604 mean_circ: 0.947239
Ran for 70050 frames Cell Events: 1618 mean_circ: 0.947267
Ran for 70550 frames Cell Events: 1638 mean_circ: 0.947307
Ran for 71050 frames Cell Events: 1650 mean_circ: 0.947347
Ran for 71550 frames Cell Events: 1666 mean_circ: 0.947146
Ran for 72050 frames Cell Events: 1681 mean_circ: 0.947039
Ran for 72550 frames Cell Events: 1695 mean_circ: 0.946995
Ran for 73050 frames Cell Events: 1708 mean_circ: 0.946876
Ran for 73550 frames Cell Events: 1719 mean_circ: 0.946843
Ran for 74050 frames Cell Events: 1730 mean_circ: 0.946944
Ran for 76050 frames Cell Events: 1782 mean_circ: 0.947197
Ran for 76550 frames Cell Events: 1797 mean_circ: 0.947122
Ran for 77050 frames Cell Events: 1805 mean_circ: 0.947108
Ran for 77550 frames Cell Events: 1820 mean_circ: 0.947151
Ran for 78050 frames Cell Events: 1831 mean_circ: 0.947142
Ran for 79050 frames Cell Events: 1855 mean_circ: 0.94725
Ran for 79550 frames Cell Events: 1873 mean_circ: 0.946983
Ran for 80050 frames Cell Events: 1883 mean_circ: 0.947007
Ran for 80550 frames Cell Events: 1901 mean_circ: 0.947064
Ran for 81050 frames Cell Events: 1911 mean_circ: 0.947093
Ran for 81550 frames Cell Events: 1929 mean_circ: 0.94713
Ran for 82050 frames Cell Events: 1941 mean_circ: 0.947208
Ran for 82550 frames Cell Events: 1953 mean_circ: 0.947074
Ran for 83050 frames Cell Events: 1968 mean_circ: 0.947095
Ran for 83550 frames Cell Events: 1981 mean_circ: 0.94722
Ran for 84050 frames Cell Events: 2007 mean_circ: 0.947044
Ran for 84550 frames Cell Events: 2020 mean_circ: 0.94706
Ran for 85050 frames Cell Events: 2039 mean_circ: 0.946938
Ran for 85550 frames Cell Events: 2051 mean_circ: 0.946961
Ran for 86050 frames Cell Events: 2065 mean_circ: 0.946989
Ran for 87050 frames Cell Events: 2088 mean_circ: 0.946961
Ran for 87550 frames Cell Events: 2102 mean_circ: 0.94693
Ran for 88050 frames Cell Events: 2112 mean_circ: 0.946971
Ran for 88550 frames Cell Events: 2119 mean_circ: 0.94698
Ran for 89050 frames Cell Events: 2136 mean_circ: 0.94704
Ran for 90050 frames Cell Events: 2161 mean_circ: 0.946941
Ran for 90550 frames Cell Events: 2171 mean_circ: 0.946967
Ran for 91050 frames Cell Events: 2183 mean_circ: 0.94696
Ran for 91550 frames Cell Events: 2195 mean_circ: 0.947011
Ran for 92550 frames Cell Events: 2227 mean_circ: 0.946876
Ran for 94050 frames Cell Events: 2274 mean_circ: 0.946809
Ran for 94550 frames Cell Events: 2285 mean_circ: 0.946853
Ran for 95050 frames Cell Events: 2292 mean_circ: 0.946715
Ran for 95550 frames Cell Events: 2305 mean_circ: 0.946639
Ran for 96050 frames Cell Events: 2321 mean_circ: 0.946532
Ran for 96550 frames Cell Events: 2332 mean_circ: 0.946542
Ran for 97050 frames Cell Events: 2342 mean_circ: 0.946559
Ran for 98050 frames Cell Events: 2375 mean_circ: 0.9466
Ran for 98550 frames Cell Events: 2391 mean_circ: 0.946699
Ran for 99050 frames Cell Events: 2403 mean_circ: 0.946687
Ran for 100050 frames Cell Events: 2434 mean_circ: 0.946795
Ran for 100550 frames Cell Events: 2446 mean_circ: 0.946747
Ran for 101050 frames Cell Events: 2456 mean_circ: 0.946755
Ran for 101550 frames Cell Events: 2471 mean_circ: 0.946744
Ran for 102550 frames Cell Events: 2500 mean_circ: 0.946699
Ran for 103550 frames Cell Events: 2525 mean_circ: 0.946757
Ran for 104050 frames Cell Events: 2544 mean_circ: 0.946793
Ran for 104550 frames Cell Events: 2568 mean_circ: 0.946767
Ran for 105050 frames Cell Events: 2576 mean_circ: 0.946792
Ran for 105550 frames Cell Events: 2587 mean_circ: 0.946848
Ran for 106050 frames Cell Events: 2595 mean_circ: 0.946888
Ran for 106550 frames Cell Events: 2611 mean_circ: 0.946904
Ran for 107050 frames Cell Events: 2629 mean_circ: 0.946799
Ran for 107550 frames Cell Events: 2639 mean_circ: 0.946862
Ran for 108050 frames Cell Events: 2648 mean_circ: 0.946755
Ran for 109550 frames Cell Events: 2685 mean_circ: 0.946824
Ran for 110550 frames Cell Events: 2708 mean_circ: 0.946932
Ran for 111050 frames Cell Events: 2724 mean_circ: 0.946898
Ran for 111550 frames Cell Events: 2740 mean_circ: 0.946883
Ran for 112050 frames Cell Events: 2749 mean_circ: 0.946918
Ran for 112550 frames Cell Events: 2762 mean_circ: 0.946941
Ran for 113050 frames Cell Events: 2776 mean_circ: 0.946997
Ran for 113550 frames Cell Events: 2785 mean_circ: 0.946998
Ran for 114050 frames Cell Events: 2801 mean_circ: 0.947031
Ran for 114550 frames Cell Events: 2807 mean_circ: 0.947053
Ran for 115050 frames Cell Events: 2816 mean_circ: 0.947047
Ran for 117050 frames Cell Events: 2860 mean_circ: 0.947021
Ran for 118550 frames Cell Events: 2907 mean_circ: 0.947021
Ran for 119050 frames Cell Events: 2920 mean_circ: 0.946995
Ran for 119550 frames Cell Events: 2928 mean_circ: 0.946951
Ran for 120050 frames Cell Events: 2938 mean_circ: 0.946943
Ran for 120550 frames Cell Events: 2950 mean_circ: 0.946983
Ran for 121550 frames Cell Events: 2977 mean_circ: 0.947045
Ran for 122050 frames Cell Events: 2986 mean_circ: 0.947009
Ran for 122550 frames Cell Events: 2998 mean_circ: 0.947096
Ran for 123050 frames Cell Events: 3009 mean_circ: 0.947117
Ran for 123550 frames Cell Events: 3023 mean_circ: 0.947138
Ran for 124050 frames Cell Events: 3032 mean_circ: 0.947127
Ran for 124550 frames Cell Events: 3042 mean_circ: 0.947033
Ran for 125050 frames Cell Events: 3049 mean_circ: 0.946996
Ran for 126050 frames Cell Events: 3077 mean_circ: 0.946926
Ran for 126550 frames Cell Events: 3095 mean_circ: 0.946978
Ran for 127550 frames Cell Events: 3115 mean_circ: 0.947025
Ran for 128050 frames Cell Events: 3126 mean_circ: 0.947024
Ran for 129050 frames Cell Events: 3153 mean_circ: 0.946988
Ran for 129550 frames Cell Events: 3165 mean_circ: 0.946979
Ran for 130050 frames Cell Events: 3183 mean_circ: 0.946946
Ran for 130550 frames Cell Events: 3198 mean_circ: 0.947025
Ran for 131550 frames Cell Events: 3223 mean_circ: 0.947014
Ran for 132050 frames Cell Events: 3232 mean_circ: 0.946859
Ran for 132550 frames Cell Events: 3241 mean_circ: 0.94686
Ran for 133050 frames Cell Events: 3254 mean_circ: 0.946808
Ran for 133550 frames Cell Events: 3278 mean_circ: 0.94681
Ran for 134550 frames Cell Events: 3302 mean_circ: 0.946754
Ran for 135550 frames Cell Events: 3338 mean_circ: 0.94678
Ran for 136550 frames Cell Events: 3359 mean_circ: 0.9468
Ran for 137550 frames Cell Events: 3382 mean_circ: 0.946768
Ran for 138050 frames Cell Events: 3395 mean_circ: 0.946768
Ran for 138550 frames Cell Events: 3404 mean_circ: 0.946766
Ran for 139050 frames Cell Events: 3415 mean_circ: 0.946756
Ran for 139550 frames Cell Events: 3424 mean_circ: 0.94679
Ran for 140050 frames Cell Events: 3434 mean_circ: 0.946819
Ran for 140550 frames Cell Events: 3444 mean_circ: 0.946801
Ran for 141050 frames Cell Events: 3452 mean_circ: 0.946713
Ran for 141550 frames Cell Events: 3465 mean_circ: 0.94674
Ran for 142050 frames Cell Events: 3472 mean_circ: 0.946732
Ran for 143050 frames Cell Events: 3504 mean_circ: 0.946665
Ran for 143550 frames Cell Events: 3510 mean_circ: 0.946672
Ran for 144050 frames Cell Events: 3520 mean_circ: 0.946671
Ran for 145050 frames Cell Events: 3559 mean_circ: 0.946578
Ran for 145550 frames Cell Events: 3577 mean_circ: 0.94655
Ran for 146550 frames Cell Events: 3604 mean_circ: 0.946608
Ran for 147050 frames Cell Events: 3626 mean_circ: 0.946597
Ran for 147550 frames Cell Events: 3640 mean_circ: 0.946645
Ran for 149550 frames Cell Events: 3705 mean_circ: 0.946603
Ran for 150050 frames Cell Events: 3721 mean_circ: 0.946607
Ran for 151050 frames Cell Events: 3765 mean_circ: 0.946465
Ran for 152050 frames Cell Events: 3803 mean_circ: 0.946487
Ran for 152550 frames Cell Events: 3825 mean_circ: 0.946523
Ran for 153050 frames Cell Events: 3841 mean_circ: 0.946584
Ran for 153550 frames Cell Events: 3852 mean_circ: 0.946565
Ran for 154050 frames Cell Events: 3869 mean_circ: 0.946602
Ran for 154550 frames Cell Events: 3882 mean_circ: 0.946587
Ran for 155050 frames Cell Events: 3893 mean_circ: 0.946581
Ran for 155550 frames Cell Events: 3906 mean_circ: 0.946616
Ran for 157050 frames Cell Events: 3948 mean_circ: 0.946541
Ran for 157550 frames Cell Events: 3964 mean_circ: 0.946546
Ran for 159050 frames Cell Events: 4000 mean_circ: 0.946529
Ran for 159550 frames Cell Events: 4015 mean_circ: 0.946576
Ran for 160050 frames Cell Events: 4036 mean_circ: 0.94657
Ran for 161050 frames Cell Events: 4077 mean_circ: 0.946526
Ran for 161550 frames Cell Events: 4091 mean_circ: 0.946548
Ran for 162550 frames Cell Events: 4126 mean_circ: 0.946501
Ran for 163050 frames Cell Events: 4143 mean_circ: 0.946511
Ran for 163550 frames Cell Events: 4163 mean_circ: 0.946531
Ran for 164050 frames Cell Events: 4183 mean_circ: 0.946532
Ran for 165050 frames Cell Events: 4225 mean_circ: 0.94645
Ran for 166050 frames Cell Events: 4263 mean_circ: 0.946384
Ran for 166550 frames Cell Events: 4269 mean_circ: 0.946364
Ran for 167050 frames Cell Events: 4276 mean_circ: 0.946388
Ran for 167550 frames Cell Events: 4295 mean_circ: 0.946392
Ran for 168050 frames Cell Events: 4310 mean_circ: 0.946407
Ran for 169050 frames Cell Events: 4339 mean_circ: 0.946361
Ran for 170550 frames Cell Events: 4386 mean_circ: 0.946374
Ran for 171550 frames Cell Events: 4412 mean_circ: 0.946334
Ran for 172050 frames Cell Events: 4422 mean_circ: 0.94635
Ran for 173050 frames Cell Events: 4449 mean_circ: 0.946416
Ran for 173550 frames Cell Events: 4469 mean_circ: 0.946418
Ran for 174050 frames Cell Events: 4490 mean_circ: 0.946453
Ran for 174550 frames Cell Events: 4503 mean_circ: 0.946482
Ran for 175050 frames Cell Events: 4522 mean_circ: 0.946491
Ran for 175550 frames Cell Events: 4535 mean_circ: 0.946508
Ran for 176050 frames Cell Events: 4552 mean_circ: 0.946515
Ran for 176550 frames Cell Events: 4566 mean_circ: 0.946556
Ran for 177550 frames Cell Events: 4598 mean_circ: 0.94655
Ran for 178550 frames Cell Events: 4620 mean_circ: 0.946621
Ran for 179050 frames Cell Events: 4629 mean_circ: 0.946651
Ran for 179550 frames Cell Events: 4648 mean_circ: 0.94661
Ran for 180550 frames Cell Events: 4671 mean_circ: 0.946582
Ran for 181050 frames Cell Events: 4689 mean_circ: 0.946594
Ran for 181550 frames Cell Events: 4699 mean_circ: 0.946666
Ran for 182050 frames Cell Events: 4722 mean_circ: 0.946684
Ran for 182550 frames Cell Events: 4733 mean_circ: 0.946679
Ran for 183050 frames Cell Events: 4752 mean_circ: 0.946706
Ran for 183550 frames Cell Events: 4765 mean_circ: 0.946701
Ran for 184050 frames Cell Events: 4776 mean_circ: 0.946707
Ran for 185550 frames Cell Events: 4817 mean_circ: 0.946671
Ran for 186050 frames Cell Events: 4831 mean_circ: 0.946663
Ran for 186550 frames Cell Events: 4854 mean_circ: 0.946723
Ran for 187050 frames Cell Events: 4868 mean_circ: 0.946745
Ran for 187550 frames Cell Events: 4878 mean_circ: 0.946761
Ran for 188050 frames Cell Events: 4888 mean_circ: 0.946764
Ran for 189550 frames Cell Events: 4931 mean_circ: 0.946734
Ran for 190050 frames Cell Events: 4945 mean_circ: 0.946737
Ran for 190550 frames Cell Events: 4958 mean_circ: 0.946749
Ran for 191050 frames Cell Events: 4978 mean_circ: 0.946653
Ran for 191550 frames Cell Events: 4992 mean_circ: 0.946625
Ran for 192550 frames Cell Events: 5017 mean_circ: 0.946644
Ran for 193550 frames Cell Events: 5053 mean_circ: 0.946666
Ran for 194550 frames Cell Events: 5086 mean_circ: 0.946622
Ran for 195050 frames Cell Events: 5098 mean_circ: 0.946653
Ran for 195550 frames Cell Events: 5111 mean_circ: 0.946689
Ran for 197550 frames Cell Events: 5175 mean_circ: 0.946643
Ran for 198050 frames Cell Events: 5189 mean_circ: 0.946613
Ran for 198550 frames Cell Events: 5208 mean_circ: 0.946611
Ran for 199550 frames Cell Events: 5238 mean_circ: 0.946666
Ran for 200050 frames Cell Events: 5254 mean_circ: 0.946679
Ran for 200550 frames Cell Events: 5267 mean_circ: 0.946647
Ran for 201050 frames Cell Events: 5279 mean_circ: 0.946664
Ran for 201550 frames Cell Events: 5296 mean_circ: 0.946683
Ran for 202550 frames Cell Events: 5329 mean_circ: 0.946572
Ran for 203550 frames Cell Events: 5355 mean_circ: 0.946591
Ran for 204050 frames Cell Events: 5366 mean_circ: 0.946578
Ran for 204550 frames Cell Events: 5377 mean_circ: 0.946568
Ran for 205050 frames Cell Events: 5393 mean_circ: 0.946601
Ran for 205550 frames Cell Events: 5402 mean_circ: 0.946608
Ran for 206550 frames Cell Events: 5438 mean_circ: 0.946686
Ran for 207050 frames Cell Events: 5451 mean_circ: 0.94672
Ran for 208050 frames Cell Events: 5487 mean_circ: 0.946691
Ran for 208550 frames Cell Events: 5493 mean_circ: 0.946708
Ran for 209050 frames Cell Events: 5511 mean_circ: 0.946676
Ran for 209550 frames Cell Events: 5521 mean_circ: 0.946685
Ran for 211050 frames Cell Events: 5568 mean_circ: 0.946669
Ran for 211550 frames Cell Events: 5576 mean_circ: 0.946673
Ran for 212550 frames Cell Events: 5602 mean_circ: 0.946709
Ran for 213550 frames Cell Events: 5627 mean_circ: 0.946706
Ran for 214050 frames Cell Events: 5642 mean_circ: 0.946706
Ran for 215050 frames Cell Events: 5673 mean_circ: 0.946729
Ran for 216050 frames Cell Events: 5699 mean_circ: 0.94675
Ran for 216550 frames Cell Events: 5715 mean_circ: 0.946771
Ran for 217050 frames Cell Events: 5726 mean_circ: 0.946782
Ran for 217550 frames Cell Events: 5743 mean_circ: 0.946725
Ran for 218050 frames Cell Events: 5755 mean_circ: 0.946758
Ran for 219050 frames Cell Events: 5778 mean_circ: 0.946745
Ran for 220050 frames Cell Events: 5797 mean_circ: 0.946775
Ran for 220550 frames Cell Events: 5819 mean_circ: 0.946751
Ran for 221050 frames Cell Events: 5836 mean_circ: 0.946783
Ran for 221550 frames Cell Events: 5846 mean_circ: 0.946792
Ran for 222050 frames Cell Events: 5858 mean_circ: 0.946789
Ran for 222550 frames Cell Events: 5871 mean_circ: 0.946777
Ran for 223050 frames Cell Events: 5883 mean_circ: 0.946775
Ran for 224050 frames Cell Events: 5904 mean_circ: 0.946792
Ran for 224550 frames Cell Events: 5917 mean_circ: 0.946794
Ran for 225050 frames Cell Events: 5933 mean_circ: 0.946785
Ran for 226050 frames Cell Events: 5963 mean_circ: 0.946743
Ran for 227050 frames Cell Events: 5988 mean_circ: 0.946735
Ran for 227550 frames Cell Events: 5993 mean_circ: 0.946741
Ran for 228050 frames Cell Events: 6007 mean_circ: 0.946722
Ran for 228550 frames Cell Events: 6023 mean_circ: 0.946705
Ran for 229550 frames Cell Events: 6059 mean_circ: 0.946696
Ran for 230050 frames Cell Events: 6067 mean_circ: 0.946699
Ran for 230550 frames Cell Events: 6079 mean_circ: 0.946691
Ran for 231050 frames Cell Events: 6092 mean_circ: 0.946706
Ran for 231550 frames Cell Events: 6109 mean_circ: 0.946728
Ran for 233050 frames Cell Events: 6146 mean_circ: 0.946762
Ran for 233550 frames Cell Events: 6157 mean_circ: 0.946763
Ran for 234550 frames Cell Events: 6192 mean_circ: 0.946763
Ran for 235050 frames Cell Events: 6203 mean_circ: 0.94677
Ran for 235550 frames Cell Events: 6211 mean_circ: 0.946786
Ran for 236050 frames Cell Events: 6227 mean_circ: 0.946803
Ran for 236550 frames Cell Events: 6238 mean_circ: 0.946785
Ran for 237050 frames Cell Events: 6254 mean_circ: 0.946756
Ran for 237550 frames Cell Events: 6262 mean_circ: 0.946756
Ran for 238050 frames Cell Events: 6282 mean_circ: 0.946704
Ran for 238550 frames Cell Events: 6299 mean_circ: 0.946693
Ran for 239050 frames Cell Events: 6319 mean_circ: 0.946691
Ran for 240050 frames Cell Events: 6369 mean_circ: 0.946691
Ran for 240550 frames Cell Events: 6378 mean_circ: 0.946706
Ran for 241050 frames Cell Events: 6397 mean_circ: 0.946654
Ran for 241550 frames Cell Events: 6414 mean_circ: 0.946623
Ran for 242050 frames Cell Events: 6430 mean_circ: 0.946644
Ran for 242550 frames Cell Events: 6452 mean_circ: 0.946669
Ran for 243550 frames Cell Events: 6484 mean_circ: 0.946711
Ran for 244050 frames Cell Events: 6499 mean_circ: 0.946681
Ran for 244550 frames Cell Events: 6520 mean_circ: 0.946659
Ran for 245550 frames Cell Events: 6550 mean_circ: 0.946651
Ran for 246550 frames Cell Events: 6587 mean_circ: 0.946688
Ran for 247550 frames Cell Events: 6624 mean_circ: 0.946754
Ran for 248050 frames Cell Events: 6648 mean_circ: 0.946736
Ran for 249050 frames Cell Events: 6685 mean_circ: 0.946633
Ran for 249550 frames Cell Events: 6698 mean_circ: 0.946636
Ran for 250050 frames Cell Events: 6709 mean_circ: 0.946623
Ran for 250550 frames Cell Events: 6725 mean_circ: 0.946616
Ran for 251050 frames Cell Events: 6737 mean_circ: 0.946626
Ran for 252050 frames Cell Events: 6758 mean_circ: 0.946646
Ran for 253550 frames Cell Events: 6819 mean_circ: 0.946665
Ran for 254050 frames Cell Events: 6840 mean_circ: 0.946673
Ran for 254550 frames Cell Events: 6855 mean_circ: 0.946676
Ran for 255050 frames Cell Events: 6871 mean_circ: 0.946702
Ran for 255550 frames Cell Events: 6886 mean_circ: 0.946752
Ran for 256550 frames Cell Events: 6916 mean_circ: 0.946692
Ran for 257550 frames Cell Events: 6952 mean_circ: 0.946657
Ran for 258050 frames Cell Events: 6978 mean_circ: 0.946639
Ran for 258550 frames Cell Events: 6996 mean_circ: 0.946631
Ran for 259550 frames Cell Events: 7036 mean_circ: 0.946651
Ran for 261050 frames Cell Events: 7083 mean_circ: 0.946655
Ran for 262550 frames Cell Events: 7138 mean_circ: 0.946644
Ran for 263050 frames Cell Events: 7162 mean_circ: 0.946644
Ran for 263550 frames Cell Events: 7178 mean_circ: 0.946676
Ran for 264050 frames Cell Events: 7201 mean_circ: 0.946683
Ran for 264550 frames Cell Events: 7212 mean_circ: 0.946687
Ran for 265050 frames Cell Events: 7229 mean_circ: 0.946652
Ran for 265550 frames Cell Events: 7253 mean_circ: 0.94662
Ran for 266050 frames Cell Events: 7270 mean_circ: 0.946623
Ran for 266550 frames Cell Events: 7282 mean_circ: 0.946657
Ran for 267050 frames Cell Events: 7294 mean_circ: 0.946648
Ran for 268050 frames Cell Events: 7332 mean_circ: 0.946642
Ran for 268550 frames Cell Events: 7348 mean_circ: 0.946656
Ran for 269050 frames Cell Events: 7362 mean_circ: 0.946674
Ran for 269550 frames Cell Events: 7383 mean_circ: 0.946676
Ran for 270050 frames Cell Events: 7395 mean_circ: 0.946679
Ran for 270550 frames Cell Events: 7407 mean_circ: 0.946699
Ran for 271050 frames Cell Events: 7426 mean_circ: 0.946731
Ran for 272050 frames Cell Events: 7458 mean_circ: 0.946749
Ran for 272550 frames Cell Events: 7480 mean_circ: 0.94674
Ran for 273050 frames Cell Events: 7506 mean_circ: 0.946731
Ran for 273550 frames Cell Events: 7520 mean_circ: 0.946738
Ran for 274050 frames Cell Events: 7542 mean_circ: 0.946729
Ran for 274550 frames Cell Events: 7553 mean_circ: 0.94672
Ran for 275550 frames Cell Events: 7586 mean_circ: 0.946754
Ran for 276050 frames Cell Events: 7603 mean_circ: 0.946785
Ran for 277550 frames Cell Events: 7647 mean_circ: 0.946854
Ran for 278050 frames Cell Events: 7665 mean_circ: 0.946842
Ran for 279050 frames Cell Events: 7698 mean_circ: 0.946817
Ran for 279550 frames Cell Events: 7708 mean_circ: 0.946842
Ran for 280550 frames Cell Events: 7733 mean_circ: 0.946852
Ran for 281050 frames Cell Events: 7753 mean_circ: 0.946857
Ran for 282050 frames Cell Events: 7784 mean_circ: 0.946889
Ran for 282550 frames Cell Events: 7803 mean_circ: 0.946897
Ran for 283050 frames Cell Events: 7825 mean_circ: 0.946905
Ran for 284050 frames Cell Events: 7859 mean_circ: 0.946939
Ran for 284550 frames Cell Events: 7872 mean_circ: 0.946934
Ran for 285050 frames Cell Events: 7886 mean_circ: 0.946934
Ran for 285550 frames Cell Events: 7902 mean_circ: 0.946953
Ran for 286050 frames Cell Events: 7909 mean_circ: 0.946962
Ran for 286550 frames Cell Events: 7922 mean_circ: 0.946956
Ran for 287050 frames Cell Events: 7939 mean_circ: 0.946982
Ran for 287550 frames Cell Events: 7958 mean_circ: 0.946989
Ran for 288550 frames Cell Events: 7979 mean_circ: 0.94701
Ran for 289050 frames Cell Events: 7999 mean_circ: 0.946969
Ran for 289550 frames Cell Events: 8009 mean_circ: 0.946982
Ran for 290050 frames Cell Events: 8025 mean_circ: 0.94701
Ran for 290550 frames Cell Events: 8038 mean_circ: 0.94702
Ran for 291550 frames Cell Events: 8073 mean_circ: 0.947015
End this measurment..
Stopping time: 2.53931e+009
****************************************
Measurement finished
Mean Circularitiy: 0.947012
Mean Area: 577.998
Mean FL-1 intensity: 3411.98
Mean FL-2 intensity: 3047.77
Mean FL-3 intensity: 0
frames processed: 293263
Total Time: 146853ms
Number of Runs (new bg img) 0
Frames collected: 293566
Skipped frames: 40085
Rescued Frames: 4349050
Samples DAQ: 73391528
Samples written: 146782942
Samples per Channel: 73391471
FPS: 1999.04
Samples per second: 499760
Expected samples/s: 500000
Events: 8140
Events per second: 55.4295
jumped back (PMT): 5990
#Frames read, frequency
# 0 frames :405923
# 1 frames :160129
# 2 frames :6573
# 3 frames :2175
# 4 frames :1379
# 5 frames :696
# 6 frames :1139
# 7 frames :1971
# 8 frames :1880
# 9 frames :1261
# 10 frames :796
# 11 frames :485
# 12 frames :448
# 13 frames :386
# 14 frames :333
# 15 frames :355
# 16 frames :268
# 17 frames :184
# 18 frames :148
# 19 frames :90
# 20 frames :66
# 21 frames :65
# 22 frames :53
# 23 frames :52
# 24 frames :39
# 25 frames :31
# 26 frames :32
# 27 frames :28
# 28 frames :9
# 29 frames :16
# 30 frames :13
# 31 frames :10
# 32 frames :9
# 33 frames :8
# 34 frames :7
# 35 frames :3
# 36 frames :9
# 37 frames :3
# 38 frames :2
# 39 frames :4
# 40 frames :3
# 42 frames :4
# 43 frames :1
# 44 frames :2
# 46 frames :2
# 48 frames :2
# 50 frames :1
# 51 frames :1
# 54 frames :1
# 58 frames :1
# 69 frames :1
# 71 frames :1
M1_para.ini
[General]
Measurement Number = 1
Flow Rate [ul/s] = 0.04
Region = "Channel"
Channel width = 20
Current LED = 100
[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 6
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0
#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 24.6571
parameters.txt
#fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 6
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 300
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0