Click on the log titles below to expand the log entries present in this DC resource.
dclab-export_2024-07-10_17.02.08
{"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc
{
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "90ae92e581697ee827afc8cea7d4c67d",
"name": "M1_20170612_2100_dsRNA_Z1_col.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "15:02:31"
}
}
FG_Config.mcf
[Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;
[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;
[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini
[Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6
[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini
[EVENT LOG] fRT-DC V1.06170206
Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 24.9487
Start pulse train for BG Aquisition..
Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 2.46466e+009
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 50 frames Cell Events: 0 mean_circ: 0.920078
Ran for 550 frames Cell Events: 14 mean_circ: 0.901159
Ran for 1050 frames Cell Events: 20 mean_circ: 0.915487
Ran for 1550 frames Cell Events: 29 mean_circ: 0.914204
Ran for 2050 frames Cell Events: 39 mean_circ: 0.922204
Ran for 3050 frames Cell Events: 54 mean_circ: 0.92488
Ran for 3550 frames Cell Events: 70 mean_circ: 0.924694
Ran for 5550 frames Cell Events: 119 mean_circ: 0.92423
Ran for 6050 frames Cell Events: 143 mean_circ: 0.923488
Ran for 7550 frames Cell Events: 184 mean_circ: 0.924755
Ran for 8050 frames Cell Events: 194 mean_circ: 0.925008
Ran for 9050 frames Cell Events: 216 mean_circ: 0.925454
Ran for 9550 frames Cell Events: 227 mean_circ: 0.925706
Ran for 10050 frames Cell Events: 237 mean_circ: 0.926059
Ran for 10550 frames Cell Events: 247 mean_circ: 0.927087
Ran for 11050 frames Cell Events: 256 mean_circ: 0.927655
Ran for 11550 frames Cell Events: 266 mean_circ: 0.928103
Ran for 12050 frames Cell Events: 276 mean_circ: 0.927296
Ran for 13050 frames Cell Events: 315 mean_circ: 0.928053
Ran for 13550 frames Cell Events: 334 mean_circ: 0.928355
Ran for 15050 frames Cell Events: 430 mean_circ: 0.927582
Ran for 15550 frames Cell Events: 453 mean_circ: 0.924989
Ran for 16050 frames Cell Events: 480 mean_circ: 0.926018
Ran for 17050 frames Cell Events: 533 mean_circ: 0.926159
Ran for 17550 frames Cell Events: 541 mean_circ: 0.925677
Ran for 18050 frames Cell Events: 555 mean_circ: 0.925661
Ran for 18550 frames Cell Events: 563 mean_circ: 0.925752
Ran for 19050 frames Cell Events: 574 mean_circ: 0.925104
Ran for 19550 frames Cell Events: 583 mean_circ: 0.925232
Ran for 20550 frames Cell Events: 603 mean_circ: 0.925412
Ran for 21050 frames Cell Events: 619 mean_circ: 0.924989
Ran for 21550 frames Cell Events: 631 mean_circ: 0.924821
Ran for 22050 frames Cell Events: 646 mean_circ: 0.924992
Ran for 22550 frames Cell Events: 655 mean_circ: 0.925078
Ran for 23050 frames Cell Events: 672 mean_circ: 0.925249
Ran for 23550 frames Cell Events: 687 mean_circ: 0.924824
Ran for 24550 frames Cell Events: 715 mean_circ: 0.925006
Ran for 25050 frames Cell Events: 721 mean_circ: 0.925106
Ran for 25550 frames Cell Events: 731 mean_circ: 0.925176
Ran for 26050 frames Cell Events: 740 mean_circ: 0.925204
Ran for 26550 frames Cell Events: 747 mean_circ: 0.925082
Ran for 27050 frames Cell Events: 761 mean_circ: 0.925011
Ran for 27550 frames Cell Events: 769 mean_circ: 0.925097
Ran for 28050 frames Cell Events: 786 mean_circ: 0.924909
Ran for 28550 frames Cell Events: 796 mean_circ: 0.925046
Ran for 29050 frames Cell Events: 819 mean_circ: 0.92505
Ran for 29550 frames Cell Events: 824 mean_circ: 0.92496
Ran for 30550 frames Cell Events: 843 mean_circ: 0.925333
Ran for 31050 frames Cell Events: 858 mean_circ: 0.925554
Ran for 32550 frames Cell Events: 899 mean_circ: 0.92552
Ran for 33050 frames Cell Events: 916 mean_circ: 0.925543
Ran for 33550 frames Cell Events: 932 mean_circ: 0.92531
Ran for 34550 frames Cell Events: 984 mean_circ: 0.9255
Ran for 35550 frames Cell Events: 1013 mean_circ: 0.925582
Ran for 36050 frames Cell Events: 1024 mean_circ: 0.925491
Ran for 36550 frames Cell Events: 1036 mean_circ: 0.925272
Ran for 37050 frames Cell Events: 1057 mean_circ: 0.925257
Ran for 37550 frames Cell Events: 1071 mean_circ: 0.9253
Ran for 38050 frames Cell Events: 1080 mean_circ: 0.925426
Ran for 38550 frames Cell Events: 1087 mean_circ: 0.925339
Ran for 40550 frames Cell Events: 1113 mean_circ: 0.925536
Ran for 41050 frames Cell Events: 1122 mean_circ: 0.925573
Ran for 41550 frames Cell Events: 1132 mean_circ: 0.925515
Ran for 42050 frames Cell Events: 1141 mean_circ: 0.925769
Ran for 43050 frames Cell Events: 1172 mean_circ: 0.925843
Ran for 43550 frames Cell Events: 1180 mean_circ: 0.925831
Ran for 44050 frames Cell Events: 1187 mean_circ: 0.925904
Ran for 44550 frames Cell Events: 1204 mean_circ: 0.925885
Ran for 45050 frames Cell Events: 1220 mean_circ: 0.925921
Ran for 45550 frames Cell Events: 1230 mean_circ: 0.925924
Ran for 46050 frames Cell Events: 1248 mean_circ: 0.926054
Ran for 46550 frames Cell Events: 1257 mean_circ: 0.926117
Ran for 47050 frames Cell Events: 1264 mean_circ: 0.926267
Ran for 48050 frames Cell Events: 1289 mean_circ: 0.926447
Ran for 48550 frames Cell Events: 1297 mean_circ: 0.926773
Ran for 49050 frames Cell Events: 1310 mean_circ: 0.926728
Ran for 49550 frames Cell Events: 1321 mean_circ: 0.926872
Ran for 50050 frames Cell Events: 1331 mean_circ: 0.926945
Ran for 50550 frames Cell Events: 1344 mean_circ: 0.927112
Ran for 51050 frames Cell Events: 1358 mean_circ: 0.927138
Ran for 51550 frames Cell Events: 1371 mean_circ: 0.927064
Ran for 52050 frames Cell Events: 1380 mean_circ: 0.927075
Ran for 52550 frames Cell Events: 1391 mean_circ: 0.927005
Ran for 53050 frames Cell Events: 1407 mean_circ: 0.926964
Ran for 53550 frames Cell Events: 1419 mean_circ: 0.926942
Ran for 54050 frames Cell Events: 1431 mean_circ: 0.926728
Ran for 54550 frames Cell Events: 1444 mean_circ: 0.926803
Ran for 55050 frames Cell Events: 1452 mean_circ: 0.926833
Ran for 56050 frames Cell Events: 1474 mean_circ: 0.927011
Ran for 56550 frames Cell Events: 1481 mean_circ: 0.926991
Ran for 57050 frames Cell Events: 1492 mean_circ: 0.92708
Ran for 57550 frames Cell Events: 1509 mean_circ: 0.92712
Ran for 58050 frames Cell Events: 1517 mean_circ: 0.927141
Ran for 58550 frames Cell Events: 1525 mean_circ: 0.927064
Ran for 59050 frames Cell Events: 1531 mean_circ: 0.927194
Ran for 60050 frames Cell Events: 1542 mean_circ: 0.927006
Ran for 60550 frames Cell Events: 1551 mean_circ: 0.927045
Ran for 61550 frames Cell Events: 1568 mean_circ: 0.926938
Ran for 62050 frames Cell Events: 1583 mean_circ: 0.927014
Ran for 62550 frames Cell Events: 1592 mean_circ: 0.927178
Ran for 63050 frames Cell Events: 1602 mean_circ: 0.927031
Ran for 64550 frames Cell Events: 1630 mean_circ: 0.927308
Ran for 65050 frames Cell Events: 1652 mean_circ: 0.927311
Ran for 65550 frames Cell Events: 1665 mean_circ: 0.927233
Ran for 67050 frames Cell Events: 1694 mean_circ: 0.927252
Ran for 67550 frames Cell Events: 1701 mean_circ: 0.927364
Ran for 68550 frames Cell Events: 1725 mean_circ: 0.927372
Ran for 69050 frames Cell Events: 1734 mean_circ: 0.927336
Ran for 69550 frames Cell Events: 1743 mean_circ: 0.927436
Ran for 70050 frames Cell Events: 1757 mean_circ: 0.927249
Ran for 71050 frames Cell Events: 1789 mean_circ: 0.92733
Ran for 73050 frames Cell Events: 1827 mean_circ: 0.927361
Ran for 74050 frames Cell Events: 1859 mean_circ: 0.927162
Ran for 74550 frames Cell Events: 1880 mean_circ: 0.927122
Ran for 75050 frames Cell Events: 1892 mean_circ: 0.92708
Ran for 75550 frames Cell Events: 1905 mean_circ: 0.927099
Ran for 76050 frames Cell Events: 1918 mean_circ: 0.927318
Ran for 76550 frames Cell Events: 1936 mean_circ: 0.927208
Ran for 77550 frames Cell Events: 1962 mean_circ: 0.92707
Ran for 78050 frames Cell Events: 1985 mean_circ: 0.927091
Ran for 78550 frames Cell Events: 1992 mean_circ: 0.927049
Ran for 79050 frames Cell Events: 2003 mean_circ: 0.927123
Ran for 79550 frames Cell Events: 2019 mean_circ: 0.927297
Ran for 80550 frames Cell Events: 2045 mean_circ: 0.92708
Ran for 81050 frames Cell Events: 2057 mean_circ: 0.926959
Ran for 81550 frames Cell Events: 2078 mean_circ: 0.926934
Ran for 82050 frames Cell Events: 2102 mean_circ: 0.927103
Ran for 82550 frames Cell Events: 2131 mean_circ: 0.927062
Ran for 84050 frames Cell Events: 2207 mean_circ: 0.92701
Ran for 85550 frames Cell Events: 2252 mean_circ: 0.926988
Ran for 86050 frames Cell Events: 2275 mean_circ: 0.926996
Ran for 86550 frames Cell Events: 2288 mean_circ: 0.92699
Ran for 87050 frames Cell Events: 2294 mean_circ: 0.926857
Ran for 87550 frames Cell Events: 2304 mean_circ: 0.926947
Ran for 88050 frames Cell Events: 2319 mean_circ: 0.926792
Ran for 89050 frames Cell Events: 2341 mean_circ: 0.926868
Ran for 90050 frames Cell Events: 2367 mean_circ: 0.926985
Ran for 90550 frames Cell Events: 2386 mean_circ: 0.927024
Ran for 91550 frames Cell Events: 2410 mean_circ: 0.927117
Ran for 92550 frames Cell Events: 2438 mean_circ: 0.927156
Ran for 93050 frames Cell Events: 2458 mean_circ: 0.927025
Ran for 94050 frames Cell Events: 2490 mean_circ: 0.92712
Ran for 94550 frames Cell Events: 2503 mean_circ: 0.927059
Ran for 96550 frames Cell Events: 2585 mean_circ: 0.926863
Ran for 97050 frames Cell Events: 2605 mean_circ: 0.926903
Ran for 97550 frames Cell Events: 2627 mean_circ: 0.927047
Ran for 99550 frames Cell Events: 2693 mean_circ: 0.926621
Ran for 100050 frames Cell Events: 2701 mean_circ: 0.926663
Ran for 100550 frames Cell Events: 2711 mean_circ: 0.926665
Ran for 101050 frames Cell Events: 2723 mean_circ: 0.926529
Ran for 101550 frames Cell Events: 2738 mean_circ: 0.926612
Ran for 102550 frames Cell Events: 2771 mean_circ: 0.926664
Ran for 103050 frames Cell Events: 2786 mean_circ: 0.926671
Ran for 103550 frames Cell Events: 2794 mean_circ: 0.926676
Ran for 104050 frames Cell Events: 2806 mean_circ: 0.926745
Ran for 104550 frames Cell Events: 2816 mean_circ: 0.92672
Ran for 105050 frames Cell Events: 2822 mean_circ: 0.926727
Ran for 105550 frames Cell Events: 2830 mean_circ: 0.926734
Ran for 106050 frames Cell Events: 2838 mean_circ: 0.926725
Ran for 107050 frames Cell Events: 2864 mean_circ: 0.926812
Ran for 108050 frames Cell Events: 2885 mean_circ: 0.926796
Ran for 108550 frames Cell Events: 2901 mean_circ: 0.926864
Ran for 110050 frames Cell Events: 2949 mean_circ: 0.926683
Ran for 110550 frames Cell Events: 2958 mean_circ: 0.926727
Ran for 111050 frames Cell Events: 2967 mean_circ: 0.926783
Ran for 111550 frames Cell Events: 2976 mean_circ: 0.92677
Ran for 112050 frames Cell Events: 2983 mean_circ: 0.926747
Ran for 112550 frames Cell Events: 2990 mean_circ: 0.92673
Ran for 113050 frames Cell Events: 2999 mean_circ: 0.926747
Ran for 113550 frames Cell Events: 3012 mean_circ: 0.926762
Ran for 114050 frames Cell Events: 3022 mean_circ: 0.926813
Ran for 114550 frames Cell Events: 3031 mean_circ: 0.926835
Ran for 115550 frames Cell Events: 3055 mean_circ: 0.926619
Ran for 116050 frames Cell Events: 3073 mean_circ: 0.926632
Ran for 117050 frames Cell Events: 3100 mean_circ: 0.926541
Ran for 117550 frames Cell Events: 3111 mean_circ: 0.926655
Ran for 118050 frames Cell Events: 3126 mean_circ: 0.926662
Ran for 119050 frames Cell Events: 3158 mean_circ: 0.926672
Ran for 119550 frames Cell Events: 3175 mean_circ: 0.926689
Ran for 120050 frames Cell Events: 3189 mean_circ: 0.926651
Ran for 121550 frames Cell Events: 3237 mean_circ: 0.926666
Ran for 122050 frames Cell Events: 3244 mean_circ: 0.926722
Ran for 122550 frames Cell Events: 3257 mean_circ: 0.926683
Ran for 123050 frames Cell Events: 3272 mean_circ: 0.926674
Ran for 123550 frames Cell Events: 3278 mean_circ: 0.926666
Ran for 125050 frames Cell Events: 3329 mean_circ: 0.926699
Ran for 125550 frames Cell Events: 3339 mean_circ: 0.926757
Ran for 126050 frames Cell Events: 3359 mean_circ: 0.926706
Ran for 127050 frames Cell Events: 3414 mean_circ: 0.926629
Ran for 127550 frames Cell Events: 3441 mean_circ: 0.926481
Ran for 129550 frames Cell Events: 3590 mean_circ: 0.926628
Ran for 130050 frames Cell Events: 3607 mean_circ: 0.926592
Ran for 131050 frames Cell Events: 3627 mean_circ: 0.926559
Ran for 131550 frames Cell Events: 3645 mean_circ: 0.926518
Ran for 132050 frames Cell Events: 3655 mean_circ: 0.926504
Ran for 132550 frames Cell Events: 3667 mean_circ: 0.926569
Ran for 133050 frames Cell Events: 3677 mean_circ: 0.926567
Ran for 134050 frames Cell Events: 3704 mean_circ: 0.926693
Ran for 134550 frames Cell Events: 3719 mean_circ: 0.926752
Ran for 135050 frames Cell Events: 3726 mean_circ: 0.92674
Ran for 135550 frames Cell Events: 3740 mean_circ: 0.926683
Ran for 136050 frames Cell Events: 3755 mean_circ: 0.926747
Ran for 136550 frames Cell Events: 3765 mean_circ: 0.926762
Ran for 137050 frames Cell Events: 3779 mean_circ: 0.926748
Ran for 138050 frames Cell Events: 3808 mean_circ: 0.926843
Ran for 138550 frames Cell Events: 3823 mean_circ: 0.926807
Ran for 139050 frames Cell Events: 3831 mean_circ: 0.926812
Ran for 139550 frames Cell Events: 3846 mean_circ: 0.92683
Ran for 140050 frames Cell Events: 3855 mean_circ: 0.926822
Ran for 140550 frames Cell Events: 3865 mean_circ: 0.926788
Ran for 141050 frames Cell Events: 3888 mean_circ: 0.926751
Ran for 141550 frames Cell Events: 3904 mean_circ: 0.92673
Ran for 142050 frames Cell Events: 3920 mean_circ: 0.926791
Ran for 142550 frames Cell Events: 3927 mean_circ: 0.926795
Ran for 143050 frames Cell Events: 3935 mean_circ: 0.926794
Ran for 143550 frames Cell Events: 3947 mean_circ: 0.926792
Ran for 144050 frames Cell Events: 3967 mean_circ: 0.926817
Ran for 145050 frames Cell Events: 4021 mean_circ: 0.926607
Ran for 145550 frames Cell Events: 4040 mean_circ: 0.926624
Ran for 146550 frames Cell Events: 4066 mean_circ: 0.926521
Ran for 147050 frames Cell Events: 4082 mean_circ: 0.926512
Ran for 147550 frames Cell Events: 4088 mean_circ: 0.926567
Ran for 148050 frames Cell Events: 4103 mean_circ: 0.926603
Ran for 148550 frames Cell Events: 4113 mean_circ: 0.926632
Ran for 149050 frames Cell Events: 4128 mean_circ: 0.92667
Ran for 150050 frames Cell Events: 4152 mean_circ: 0.926691
Ran for 150550 frames Cell Events: 4161 mean_circ: 0.926635
Ran for 151050 frames Cell Events: 4171 mean_circ: 0.926616
Ran for 151550 frames Cell Events: 4182 mean_circ: 0.926674
Ran for 152550 frames Cell Events: 4209 mean_circ: 0.926676
Ran for 153050 frames Cell Events: 4224 mean_circ: 0.926502
Ran for 153550 frames Cell Events: 4234 mean_circ: 0.926402
Ran for 154050 frames Cell Events: 4240 mean_circ: 0.92637
Ran for 154550 frames Cell Events: 4250 mean_circ: 0.926378
Ran for 155050 frames Cell Events: 4263 mean_circ: 0.92644
Ran for 155550 frames Cell Events: 4282 mean_circ: 0.92643
Ran for 156050 frames Cell Events: 4304 mean_circ: 0.92644
Ran for 156550 frames Cell Events: 4318 mean_circ: 0.926389
Ran for 157050 frames Cell Events: 4331 mean_circ: 0.926395
Ran for 157550 frames Cell Events: 4341 mean_circ: 0.926371
Ran for 158050 frames Cell Events: 4356 mean_circ: 0.926398
Ran for 159050 frames Cell Events: 4389 mean_circ: 0.926346
Ran for 160550 frames Cell Events: 4446 mean_circ: 0.926348
Ran for 161050 frames Cell Events: 4459 mean_circ: 0.926326
Ran for 161550 frames Cell Events: 4471 mean_circ: 0.926297
Ran for 162050 frames Cell Events: 4482 mean_circ: 0.926283
Ran for 162550 frames Cell Events: 4508 mean_circ: 0.926207
Ran for 163550 frames Cell Events: 4531 mean_circ: 0.926212
Ran for 164550 frames Cell Events: 4553 mean_circ: 0.926108
Ran for 165050 frames Cell Events: 4567 mean_circ: 0.926108
Ran for 166050 frames Cell Events: 4597 mean_circ: 0.926123
Ran for 167050 frames Cell Events: 4635 mean_circ: 0.926137
Ran for 167550 frames Cell Events: 4653 mean_circ: 0.926193
Ran for 168050 frames Cell Events: 4674 mean_circ: 0.92619
Ran for 168550 frames Cell Events: 4686 mean_circ: 0.926169
Ran for 169050 frames Cell Events: 4705 mean_circ: 0.926193
Ran for 170050 frames Cell Events: 4744 mean_circ: 0.926183
Ran for 170550 frames Cell Events: 4753 mean_circ: 0.926144
Ran for 171050 frames Cell Events: 4765 mean_circ: 0.926187
Ran for 171550 frames Cell Events: 4772 mean_circ: 0.926238
Ran for 172050 frames Cell Events: 4784 mean_circ: 0.926227
Ran for 172550 frames Cell Events: 4800 mean_circ: 0.926297
Ran for 173050 frames Cell Events: 4813 mean_circ: 0.926237
Ran for 173550 frames Cell Events: 4825 mean_circ: 0.926259
Ran for 174550 frames Cell Events: 4864 mean_circ: 0.926352
Ran for 175050 frames Cell Events: 4885 mean_circ: 0.926354
Ran for 175550 frames Cell Events: 4903 mean_circ: 0.926372
Ran for 176050 frames Cell Events: 4917 mean_circ: 0.926396
Ran for 176550 frames Cell Events: 4925 mean_circ: 0.926409
Ran for 177050 frames Cell Events: 4934 mean_circ: 0.92644
Ran for 178050 frames Cell Events: 4952 mean_circ: 0.926451
Ran for 178550 frames Cell Events: 4967 mean_circ: 0.92643
Ran for 179050 frames Cell Events: 4977 mean_circ: 0.926472
Ran for 179550 frames Cell Events: 5001 mean_circ: 0.926487
Ran for 181050 frames Cell Events: 5044 mean_circ: 0.926484
Ran for 181550 frames Cell Events: 5059 mean_circ: 0.926471
Ran for 182050 frames Cell Events: 5076 mean_circ: 0.926518
Ran for 183050 frames Cell Events: 5105 mean_circ: 0.926524
Ran for 184550 frames Cell Events: 5178 mean_circ: 0.926508
Ran for 185050 frames Cell Events: 5201 mean_circ: 0.926554
Ran for 185550 frames Cell Events: 5208 mean_circ: 0.926556
Ran for 186050 frames Cell Events: 5226 mean_circ: 0.926505
Ran for 186550 frames Cell Events: 5239 mean_circ: 0.926583
Ran for 187050 frames Cell Events: 5253 mean_circ: 0.926598
Ran for 188050 frames Cell Events: 5289 mean_circ: 0.92664
Ran for 188550 frames Cell Events: 5312 mean_circ: 0.9266
Ran for 189550 frames Cell Events: 5337 mean_circ: 0.926632
Ran for 191050 frames Cell Events: 5406 mean_circ: 0.926495
Ran for 191550 frames Cell Events: 5428 mean_circ: 0.926493
Ran for 193050 frames Cell Events: 5471 mean_circ: 0.926531
Ran for 193550 frames Cell Events: 5483 mean_circ: 0.926593
Ran for 194550 frames Cell Events: 5509 mean_circ: 0.926617
Ran for 195050 frames Cell Events: 5528 mean_circ: 0.92659
Ran for 195550 frames Cell Events: 5542 mean_circ: 0.926536
Ran for 196550 frames Cell Events: 5575 mean_circ: 0.926505
Ran for 197550 frames Cell Events: 5608 mean_circ: 0.926507
Ran for 198050 frames Cell Events: 5635 mean_circ: 0.926514
Ran for 198550 frames Cell Events: 5651 mean_circ: 0.926507
Ran for 199550 frames Cell Events: 5675 mean_circ: 0.926489
Ran for 200050 frames Cell Events: 5683 mean_circ: 0.926514
Ran for 200550 frames Cell Events: 5702 mean_circ: 0.926566
Ran for 201050 frames Cell Events: 5710 mean_circ: 0.926542
Ran for 201550 frames Cell Events: 5723 mean_circ: 0.926522
Ran for 202050 frames Cell Events: 5735 mean_circ: 0.926518
Ran for 202550 frames Cell Events: 5745 mean_circ: 0.926558
Ran for 203050 frames Cell Events: 5763 mean_circ: 0.926555
Ran for 203550 frames Cell Events: 5773 mean_circ: 0.926568
Ran for 205050 frames Cell Events: 5826 mean_circ: 0.926493
Ran for 205550 frames Cell Events: 5841 mean_circ: 0.926471
Ran for 206550 frames Cell Events: 5869 mean_circ: 0.926445
Ran for 207550 frames Cell Events: 5894 mean_circ: 0.926471
Ran for 208550 frames Cell Events: 5909 mean_circ: 0.926417
Ran for 209050 frames Cell Events: 5920 mean_circ: 0.926447
Ran for 209550 frames Cell Events: 5932 mean_circ: 0.926446
Ran for 210550 frames Cell Events: 5957 mean_circ: 0.926419
Ran for 211550 frames Cell Events: 5985 mean_circ: 0.926387
Ran for 212050 frames Cell Events: 5995 mean_circ: 0.926344
Ran for 213050 frames Cell Events: 6041 mean_circ: 0.926214
Ran for 213550 frames Cell Events: 6057 mean_circ: 0.926253
Ran for 214550 frames Cell Events: 6119 mean_circ: 0.926258
Ran for 215050 frames Cell Events: 6153 mean_circ: 0.926245
Ran for 216550 frames Cell Events: 6209 mean_circ: 0.926285
Ran for 217550 frames Cell Events: 6247 mean_circ: 0.92628
Ran for 218050 frames Cell Events: 6259 mean_circ: 0.926273
Ran for 218550 frames Cell Events: 6274 mean_circ: 0.926207
Ran for 219050 frames Cell Events: 6289 mean_circ: 0.926191
Ran for 219550 frames Cell Events: 6303 mean_circ: 0.926211
Ran for 220050 frames Cell Events: 6319 mean_circ: 0.926268
Ran for 220550 frames Cell Events: 6339 mean_circ: 0.926313
Ran for 221050 frames Cell Events: 6359 mean_circ: 0.926331
Ran for 221550 frames Cell Events: 6372 mean_circ: 0.926343
Ran for 222050 frames Cell Events: 6389 mean_circ: 0.92639
Ran for 222550 frames Cell Events: 6400 mean_circ: 0.926371
Ran for 223550 frames Cell Events: 6426 mean_circ: 0.92641
Ran for 224050 frames Cell Events: 6438 mean_circ: 0.926459
Ran for 224550 frames Cell Events: 6453 mean_circ: 0.926497
Ran for 225550 frames Cell Events: 6485 mean_circ: 0.926458
Ran for 226550 frames Cell Events: 6522 mean_circ: 0.926495
Ran for 227550 frames Cell Events: 6550 mean_circ: 0.92648
Ran for 228050 frames Cell Events: 6564 mean_circ: 0.926498
Ran for 228550 frames Cell Events: 6580 mean_circ: 0.926582
Ran for 229050 frames Cell Events: 6589 mean_circ: 0.926563
Ran for 230050 frames Cell Events: 6618 mean_circ: 0.926542
Ran for 230550 frames Cell Events: 6630 mean_circ: 0.92651
Ran for 231050 frames Cell Events: 6646 mean_circ: 0.926472
Ran for 231550 frames Cell Events: 6653 mean_circ: 0.926493
Ran for 232050 frames Cell Events: 6666 mean_circ: 0.926472
Ran for 232550 frames Cell Events: 6676 mean_circ: 0.926484
Ran for 233050 frames Cell Events: 6685 mean_circ: 0.926496
Ran for 233550 frames Cell Events: 6701 mean_circ: 0.926507
Ran for 234050 frames Cell Events: 6707 mean_circ: 0.926505
Ran for 234550 frames Cell Events: 6718 mean_circ: 0.926487
Ran for 235050 frames Cell Events: 6726 mean_circ: 0.926467
Ran for 235550 frames Cell Events: 6743 mean_circ: 0.926435
Ran for 236050 frames Cell Events: 6752 mean_circ: 0.926442
Ran for 236550 frames Cell Events: 6764 mean_circ: 0.926453
Ran for 237050 frames Cell Events: 6770 mean_circ: 0.926455
Ran for 237550 frames Cell Events: 6784 mean_circ: 0.926411
Ran for 240550 frames Cell Events: 6873 mean_circ: 0.926378
Ran for 241050 frames Cell Events: 6882 mean_circ: 0.926372
Ran for 243050 frames Cell Events: 6948 mean_circ: 0.926342
Ran for 243550 frames Cell Events: 6968 mean_circ: 0.92634
Ran for 244550 frames Cell Events: 7017 mean_circ: 0.926281
Ran for 245050 frames Cell Events: 7023 mean_circ: 0.926288
Ran for 246050 frames Cell Events: 7045 mean_circ: 0.926275
Ran for 246550 frames Cell Events: 7059 mean_circ: 0.926259
Ran for 247050 frames Cell Events: 7077 mean_circ: 0.926252
Ran for 247550 frames Cell Events: 7087 mean_circ: 0.92629
Ran for 248050 frames Cell Events: 7096 mean_circ: 0.926292
Ran for 248550 frames Cell Events: 7105 mean_circ: 0.926282
Ran for 249050 frames Cell Events: 7116 mean_circ: 0.92631
Ran for 249550 frames Cell Events: 7124 mean_circ: 0.92632
Ran for 252050 frames Cell Events: 7204 mean_circ: 0.926201
Ran for 252550 frames Cell Events: 7222 mean_circ: 0.92621
Ran for 253050 frames Cell Events: 7235 mean_circ: 0.926157
Ran for 253550 frames Cell Events: 7252 mean_circ: 0.926136
Ran for 254050 frames Cell Events: 7265 mean_circ: 0.926173
Ran for 254550 frames Cell Events: 7283 mean_circ: 0.926172
Ran for 255550 frames Cell Events: 7304 mean_circ: 0.92621
Ran for 256050 frames Cell Events: 7314 mean_circ: 0.926201
Ran for 256550 frames Cell Events: 7322 mean_circ: 0.926195
Ran for 257050 frames Cell Events: 7329 mean_circ: 0.926204
Ran for 258050 frames Cell Events: 7362 mean_circ: 0.926179
Ran for 260050 frames Cell Events: 7431 mean_circ: 0.926147
Ran for 260550 frames Cell Events: 7444 mean_circ: 0.926187
Ran for 261050 frames Cell Events: 7451 mean_circ: 0.926157
Ran for 261550 frames Cell Events: 7465 mean_circ: 0.926179
Ran for 262050 frames Cell Events: 7480 mean_circ: 0.926187
Ran for 263050 frames Cell Events: 7499 mean_circ: 0.926138
Ran for 263550 frames Cell Events: 7511 mean_circ: 0.926126
Ran for 264050 frames Cell Events: 7527 mean_circ: 0.926116
Ran for 264550 frames Cell Events: 7535 mean_circ: 0.926124
Ran for 265050 frames Cell Events: 7549 mean_circ: 0.926126
Ran for 265550 frames Cell Events: 7565 mean_circ: 0.926124
Ran for 266050 frames Cell Events: 7577 mean_circ: 0.926125
Ran for 267050 frames Cell Events: 7605 mean_circ: 0.926149
Ran for 267550 frames Cell Events: 7622 mean_circ: 0.926087
Ran for 268550 frames Cell Events: 7658 mean_circ: 0.926065
Ran for 270050 frames Cell Events: 7722 mean_circ: 0.926058
Ran for 270550 frames Cell Events: 7732 mean_circ: 0.926024
Ran for 271050 frames Cell Events: 7740 mean_circ: 0.926037
Ran for 272050 frames Cell Events: 7765 mean_circ: 0.926047
Ran for 272550 frames Cell Events: 7774 mean_circ: 0.926051
Ran for 273050 frames Cell Events: 7785 mean_circ: 0.926069
Ran for 273550 frames Cell Events: 7799 mean_circ: 0.926069
Ran for 274050 frames Cell Events: 7809 mean_circ: 0.926072
Ran for 274550 frames Cell Events: 7817 mean_circ: 0.926067
Ran for 275550 frames Cell Events: 7835 mean_circ: 0.926059
Ran for 276050 frames Cell Events: 7844 mean_circ: 0.926048
Ran for 277050 frames Cell Events: 7878 mean_circ: 0.926023
Ran for 277550 frames Cell Events: 7897 mean_circ: 0.926076
Ran for 278050 frames Cell Events: 7910 mean_circ: 0.926089
Ran for 278550 frames Cell Events: 7924 mean_circ: 0.926082
Ran for 279050 frames Cell Events: 7936 mean_circ: 0.926118
Ran for 280050 frames Cell Events: 7967 mean_circ: 0.9261
Ran for 281050 frames Cell Events: 7994 mean_circ: 0.926106
Ran for 281550 frames Cell Events: 8015 mean_circ: 0.926074
Ran for 282050 frames Cell Events: 8021 mean_circ: 0.926062
Ran for 282550 frames Cell Events: 8040 mean_circ: 0.92608
Ran for 283050 frames Cell Events: 8058 mean_circ: 0.926085
Ran for 283550 frames Cell Events: 8075 mean_circ: 0.926056
Ran for 284550 frames Cell Events: 8089 mean_circ: 0.926034
Ran for 285050 frames Cell Events: 8098 mean_circ: 0.92605
Ran for 285550 frames Cell Events: 8114 mean_circ: 0.926029
Ran for 287550 frames Cell Events: 8260 mean_circ: 0.926019
Ran for 288050 frames Cell Events: 8282 mean_circ: 0.925968
Ran for 289550 frames Cell Events: 8332 mean_circ: 0.925956
Ran for 290050 frames Cell Events: 8346 mean_circ: 0.92595
Ran for 291550 frames Cell Events: 8385 mean_circ: 0.925943
Ran for 292550 frames Cell Events: 8407 mean_circ: 0.92591
Ran for 293050 frames Cell Events: 8416 mean_circ: 0.925931
Ran for 293550 frames Cell Events: 8427 mean_circ: 0.925936
Ran for 294050 frames Cell Events: 8436 mean_circ: 0.925919
Ran for 294550 frames Cell Events: 8447 mean_circ: 0.925896
Ran for 295050 frames Cell Events: 8458 mean_circ: 0.925891
Ran for 295550 frames Cell Events: 8471 mean_circ: 0.925881
Ran for 296050 frames Cell Events: 8485 mean_circ: 0.925842
Ran for 296550 frames Cell Events: 8501 mean_circ: 0.925832
Ran for 298050 frames Cell Events: 8565 mean_circ: 0.925764
Ran for 298550 frames Cell Events: 8571 mean_circ: 0.925771
Ran for 299550 frames Cell Events: 8598 mean_circ: 0.925794
Ran for 300550 frames Cell Events: 8619 mean_circ: 0.925828
Ran for 301050 frames Cell Events: 8638 mean_circ: 0.925856
Ran for 301550 frames Cell Events: 8647 mean_circ: 0.925835
Ran for 302050 frames Cell Events: 8655 mean_circ: 0.92584
Ran for 303050 frames Cell Events: 8684 mean_circ: 0.925859
Ran for 303550 frames Cell Events: 8693 mean_circ: 0.925871
Ran for 304050 frames Cell Events: 8708 mean_circ: 0.925843
Ran for 304550 frames Cell Events: 8720 mean_circ: 0.925888
Ran for 305550 frames Cell Events: 8742 mean_circ: 0.925908
Ran for 306050 frames Cell Events: 8751 mean_circ: 0.925903
Ran for 306550 frames Cell Events: 8764 mean_circ: 0.92592
Ran for 307050 frames Cell Events: 8771 mean_circ: 0.925896
Ran for 307550 frames Cell Events: 8781 mean_circ: 0.925904
Ran for 308050 frames Cell Events: 8790 mean_circ: 0.925889
Ran for 308550 frames Cell Events: 8801 mean_circ: 0.925896
Ran for 309050 frames Cell Events: 8804 mean_circ: 0.925911
Ran for 310050 frames Cell Events: 8820 mean_circ: 0.925939
Ran for 311550 frames Cell Events: 8856 mean_circ: 0.925862
Ran for 312050 frames Cell Events: 8866 mean_circ: 0.925875
Ran for 312550 frames Cell Events: 8879 mean_circ: 0.925901
Ran for 313050 frames Cell Events: 8893 mean_circ: 0.925908
Ran for 313550 frames Cell Events: 8904 mean_circ: 0.925897
Ran for 314050 frames Cell Events: 8924 mean_circ: 0.925866
Ran for 315050 frames Cell Events: 8942 mean_circ: 0.925894
Ran for 315550 frames Cell Events: 8949 mean_circ: 0.925902
Ran for 316050 frames Cell Events: 8961 mean_circ: 0.925892
Ran for 317050 frames Cell Events: 8977 mean_circ: 0.925914
Ran for 317550 frames Cell Events: 8987 mean_circ: 0.92592
Ran for 318050 frames Cell Events: 8996 mean_circ: 0.925947
Ran for 318550 frames Cell Events: 9011 mean_circ: 0.925965
Ran for 319050 frames Cell Events: 9021 mean_circ: 0.925958
Ran for 319550 frames Cell Events: 9033 mean_circ: 0.92597
Ran for 320050 frames Cell Events: 9039 mean_circ: 0.925958
Ran for 321050 frames Cell Events: 9065 mean_circ: 0.925959
Ran for 321550 frames Cell Events: 9077 mean_circ: 0.925955
Ran for 322050 frames Cell Events: 9080 mean_circ: 0.925962
Ran for 322550 frames Cell Events: 9088 mean_circ: 0.92597
Ran for 323050 frames Cell Events: 9100 mean_circ: 0.925959
Ran for 323550 frames Cell Events: 9110 mean_circ: 0.925943
Ran for 324050 frames Cell Events: 9123 mean_circ: 0.925973
Ran for 325050 frames Cell Events: 9145 mean_circ: 0.925974
Ran for 325550 frames Cell Events: 9153 mean_circ: 0.92597
Ran for 326050 frames Cell Events: 9164 mean_circ: 0.926003
Ran for 326550 frames Cell Events: 9179 mean_circ: 0.926008
Ran for 327050 frames Cell Events: 9185 mean_circ: 0.925995
Ran for 327550 frames Cell Events: 9193 mean_circ: 0.925979
End this measurment..
Stopping time: 2.46482e+009
****************************************
Measurement finished
Mean Circularitiy: 0.925977
Mean Area: 685.275
Mean FL-1 intensity: 2923.93
Mean FL-2 intensity: 3394
Mean FL-3 intensity: 0
frames processed: 325133
Total Time: 163956ms
Number of Runs (new bg img) 0
Frames collected: 327789
Skipped frames: 52654
Rescued Frames: 4928453
Samples DAQ: 81947334
Samples written: 163894534
Samples per Channel: 81947267
FPS: 1999.25
Samples per second: 499813
Expected samples/s: 500000
Events: 9194
Events per second: 56.0761
jumped back (PMT): 8740
#Frames read, frequency
# 0 frames :447913
# 1 frames :183410
# 2 frames :7618
# 3 frames :2904
# 4 frames :1479
# 5 frames :911
# 6 frames :2313
# 7 frames :2133
# 8 frames :1157
# 9 frames :827
# 10 frames :1881
# 11 frames :907
# 12 frames :601
# 13 frames :317
# 14 frames :207
# 15 frames :185
# 16 frames :157
# 17 frames :130
# 18 frames :100
# 19 frames :67
# 20 frames :64
# 21 frames :38
# 22 frames :43
# 23 frames :31
# 24 frames :32
# 25 frames :20
# 26 frames :10
# 27 frames :16
# 28 frames :8
# 29 frames :7
# 30 frames :8
# 31 frames :9
# 32 frames :3
# 33 frames :6
# 34 frames :3
# 35 frames :4
# 36 frames :2
# 37 frames :3
# 38 frames :3
# 39 frames :2
# 40 frames :4
# 41 frames :1
# 43 frames :4
# 45 frames :2
# 46 frames :1
# 47 frames :1
# 48 frames :1
# 50 frames :1
# 55 frames :2
# 56 frames :1
# 61 frames :2
# 67 frames :1
# 75 frames :1
M1_para.ini
[General]
Measurement Number = 1
Flow Rate [ul/s] = 0.04
Region = "Channel"
Channel width = 20
Current LED = 100
[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 6
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0
#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 24.9487
parameters.txt
#fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 6
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 300
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0