Click on the log titles below to expand the log entries present in this DC resource.
dclab-export_2024-07-10_16.53.23
{"dclab version": [0, 60, 3], "kwargs": {"features": ["area_cvx", "area_msd", "circ", "contour", "fl1_area", "fl1_dist", "fl1_max", "fl1_npeaks", "fl1_pos", "fl1_width", "fl2_area", "fl2_dist", "fl2_max", "fl2_npeaks", "fl2_pos", "fl2_width", "frame", "image", "inert_ratio_cvx", "inert_ratio_raw", "mask", "nevents", "pos_x", "pos_y", "size_x", "size_y", "trace"], "filtered": true, "logs": false, "tables": false, "basins": false, "meta_prefix": "src_", "skip_checks": false}}
dclab-tdms2rtdc
{
"ancillary features": [
"mask"
],
"files": [
{
"index": 1,
"md5-5M": "fd55c2d7788439176a948e3898157fea",
"name": "M1_20170612_1905_dsRNA_T2_col.tdms"
}
],
"libraries": {
"dclab": "0.60.3",
"h5py": "3.11.0",
"imageio": "2.34.2",
"nptdms": "1.8.0",
"numpy": "1.26.4"
},
"python": {
"build": "tags/v3.11.1:a7a450f, Dec 6 2022 19:58:39",
"implementation": "CPython",
"version": "3.11.1"
},
"system": {
"info": "Windows-10-10.0.19045-SP0",
"machine": "AMD64",
"name": "Windows",
"release": "10",
"version": "10.0.19045"
},
"utc": {
"date": "2024-07-10",
"time": "14:53:45"
}
}
dclab-tdms2rtdc-warnings
LimitingExportSizeWarning
in dclab.rtdc_dataset.export line 305:
Not all features have the same length! Limiting output event count to 8562 (max 8563) in '8562'.
FG_Config.mcf
[Kamerasektion]
ConfigFileVersion=2.0;
Hersteller='Generic-CameraLink';
Typ='vas';
HapName='C:/Lib/SiliconSoftware/Runtime5.4.1/Hardware Applets/mE4VD4-CL/PR_BG_subtr_141204_ext_trig_noerode.hap';
Version='1.5';
LoadAppletId=0;
AktivePort=0;
[ID0]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
FG_PORT=0;
FG_GLOBAL_ACCESS=0;
Device1_Process0_UpperBits_BitOffset=4;
Device1_Process0_module9_SyncMode=0;
Device1_Process0_Camera_DvalMode=1;
Device1_Process0_Camera_FullMode=0;
Device1_Process0_DMA_PixelsPerLine=0;
Device1_Process0_DMA_BytesPerLine=0;
Device1_Process0_LowerBits_BitOffset=0;
Device1_Process0_Buffer1_XOffset=0;
Device1_Process0_Buffer1_XLength=256;
Device1_Process0_Buffer1_YOffset=0;
Device1_Process0_Buffer1_YLength=96;
Device1_Process0_Buffer1_FillLevel=75;
Device1_Process0_Buffer1_Overflow=0;
Device1_Process0_Buffer1_InfiniteSource=0;
Device1_Process0_Buffer0_XOffset=0;
Device1_Process0_Buffer0_XLength=256;
Device1_Process0_Buffer0_YOffset=0;
Device1_Process0_Buffer0_YLength=96;
Device1_Process0_Buffer0_FillLevel=75;
Device1_Process0_Buffer0_Overflow=0;
Device1_Process0_Buffer0_InfiniteSource=0;
Device1_Process0_module12_BufferWidth=400;
Device1_Process0_module12_BufferHeight=96;
Device1_Process0_module12_XOffset=0;
Device1_Process0_module12_XLength=256;
Device1_Process0_module12_YOffset=0;
Device1_Process0_module12_YLength=96;
Device1_Process0_module12_UpdateROI=1;
Device1_Process0_module12_CoefficientFile 0='coefficients_0.tif';
Device1_Process0_module12_LoadCoefficients=1;
Device1_Process0_module13_SyncMode=0;
Device1_Process0_module16_from=18446744073709551360;
Device1_Process0_module16_to=18446744073709551610;
Device1_Process0_module17_Value=0;
Device1_Process0_module20_PixelsPerLine=0;
Device1_Process0_module20_BytesPerLine=0;
Device1_Process0_module21_Number=0;
Device1_Process0_module26_ScaleFactorMaxBits=8;
Device1_Process0_module26_ScaleFactor=255;
Device1_Process0_module28_TriggerMode=2;
Device1_Process0_module28_ExsyncEnable=1;
Device1_Process0_module28_FlashEnable=1;
Device1_Process0_module28_SoftwareTrgPulse=1;
Device1_Process0_module28_SoftwareTrgIsBusy=0;
Device1_Process0_module28_ImgTrgInSource=0;
Device1_Process0_module28_ImgTrgInPolarity=0;
Device1_Process0_module28_ImgTrgDownscale=1;
Device1_Process0_module28_Accuracy=2;
Device1_Process0_module28_ExsyncFramesPerSec=2000;
Device1_Process0_module28_ExsyncExposure=20;
Device1_Process0_module28_ExsyncDelay=0;
Device1_Process0_module28_ExsyncPolarity=0;
Device1_Process0_module28_FlashDelay=0;
Device1_Process0_module28_SoftwareTrgDeadTime=10000;
Device1_Process0_module28_FlashPolarity=1;
Device1_Process0_module28_CC1output=0;
Device1_Process0_module28_CC2output=8;
Device1_Process0_module28_CC3output=8;
Device1_Process0_module28_CC4output=8;
Device1_Process0_module28_DebouncingMaxTime=65.52;
Device1_Process0_module28_DebouncingTime=0.112;
[ID1]
FG_WIDTH=256;
FG_HEIGHT=96;
FG_TIMEOUT=1000000;
FG_FORMAT=3;
M1_camera.ini
[Framerate]
Shutter Time = 20
Frame Rate = 2000
Tap Mode = 8x8 Bit
Tap Code = 6
[ROI]
x-pos = 504
y-pos = 472
width = 256
height = 96
M1_log.ini
[EVENT LOG] fRT-DC V1.06170206
Reset global variables..
Circular Buffer Size is: 1000000
Ambient Temperature [C] = 24.8382
Start pulse train for BG Aquisition..
Now refreshing the background image stored in the framegrabber
STATE: 3
Starting time: 2.45772e+009
Use analog input: pci/ai4,pci/ai5
Samplerate per channel: 500000
Buffersize in byte: 1000000
Rising Edge, Continuous Sampling
N_callback: 125
Callbacks per frame: 2
Callback registered
Configure tasks for online measurement..
Timing: start directly
Freq: 2000
Duty cycle: 0.5
Reset global variables: i0, i1, samplesThisRun
Start the Fragegrabber ..
Start the NI-DAQ Card..
Stop after time: 0
Stop after nr. of cells: 10000
Ran for 550 frames Cell Events: 12 mean_circ: 0.947434
Ran for 1550 frames Cell Events: 40 mean_circ: 0.951903
Ran for 2050 frames Cell Events: 55 mean_circ: 0.948687
Ran for 3050 frames Cell Events: 94 mean_circ: 0.949513
Ran for 3550 frames Cell Events: 109 mean_circ: 0.948914
Ran for 4050 frames Cell Events: 127 mean_circ: 0.949723
Ran for 5050 frames Cell Events: 168 mean_circ: 0.950922
Ran for 5550 frames Cell Events: 181 mean_circ: 0.951876
Ran for 6050 frames Cell Events: 197 mean_circ: 0.951058
Ran for 6550 frames Cell Events: 214 mean_circ: 0.951848
Ran for 7050 frames Cell Events: 234 mean_circ: 0.951895
Ran for 7550 frames Cell Events: 248 mean_circ: 0.951889
Ran for 8050 frames Cell Events: 273 mean_circ: 0.952143
Ran for 8550 frames Cell Events: 283 mean_circ: 0.952102
Ran for 9550 frames Cell Events: 310 mean_circ: 0.951483
Ran for 10050 frames Cell Events: 322 mean_circ: 0.94942
Ran for 10550 frames Cell Events: 334 mean_circ: 0.949145
Ran for 11550 frames Cell Events: 361 mean_circ: 0.949427
Ran for 12050 frames Cell Events: 369 mean_circ: 0.949457
Ran for 12550 frames Cell Events: 380 mean_circ: 0.949793
Ran for 13050 frames Cell Events: 395 mean_circ: 0.949679
Ran for 14050 frames Cell Events: 415 mean_circ: 0.950131
Ran for 14550 frames Cell Events: 421 mean_circ: 0.949711
Ran for 15050 frames Cell Events: 436 mean_circ: 0.949568
Ran for 15550 frames Cell Events: 452 mean_circ: 0.949601
Ran for 16050 frames Cell Events: 463 mean_circ: 0.949929
Ran for 16550 frames Cell Events: 477 mean_circ: 0.950415
Ran for 17050 frames Cell Events: 496 mean_circ: 0.950482
Ran for 17550 frames Cell Events: 509 mean_circ: 0.950394
Ran for 18050 frames Cell Events: 526 mean_circ: 0.950787
Ran for 18550 frames Cell Events: 534 mean_circ: 0.951196
Ran for 19550 frames Cell Events: 559 mean_circ: 0.951417
Ran for 20050 frames Cell Events: 577 mean_circ: 0.951011
Ran for 21050 frames Cell Events: 603 mean_circ: 0.951211
Ran for 22050 frames Cell Events: 635 mean_circ: 0.951249
Ran for 22550 frames Cell Events: 656 mean_circ: 0.951314
Ran for 23050 frames Cell Events: 677 mean_circ: 0.951637
Ran for 24050 frames Cell Events: 702 mean_circ: 0.951657
Ran for 24550 frames Cell Events: 720 mean_circ: 0.951742
Ran for 25050 frames Cell Events: 733 mean_circ: 0.951824
Ran for 25550 frames Cell Events: 748 mean_circ: 0.951425
Ran for 26050 frames Cell Events: 759 mean_circ: 0.951482
Ran for 26550 frames Cell Events: 771 mean_circ: 0.951503
Ran for 27550 frames Cell Events: 795 mean_circ: 0.951461
Ran for 28550 frames Cell Events: 827 mean_circ: 0.951357
Ran for 29550 frames Cell Events: 854 mean_circ: 0.951459
Ran for 30050 frames Cell Events: 872 mean_circ: 0.95139
Ran for 31050 frames Cell Events: 900 mean_circ: 0.951507
Ran for 31550 frames Cell Events: 915 mean_circ: 0.950811
Ran for 32050 frames Cell Events: 930 mean_circ: 0.95095
Ran for 32550 frames Cell Events: 947 mean_circ: 0.950824
Ran for 35050 frames Cell Events: 1006 mean_circ: 0.951047
Ran for 35550 frames Cell Events: 1016 mean_circ: 0.950964
Ran for 36050 frames Cell Events: 1026 mean_circ: 0.951051
Ran for 36550 frames Cell Events: 1036 mean_circ: 0.951103
Ran for 37550 frames Cell Events: 1063 mean_circ: 0.950958
Ran for 38550 frames Cell Events: 1113 mean_circ: 0.951258
Ran for 39550 frames Cell Events: 1140 mean_circ: 0.951296
Ran for 40050 frames Cell Events: 1148 mean_circ: 0.951241
Ran for 40550 frames Cell Events: 1152 mean_circ: 0.951248
Ran for 41050 frames Cell Events: 1170 mean_circ: 0.951355
Ran for 42050 frames Cell Events: 1187 mean_circ: 0.951434
Ran for 42550 frames Cell Events: 1194 mean_circ: 0.95143
Ran for 43050 frames Cell Events: 1198 mean_circ: 0.951412
Ran for 44050 frames Cell Events: 1216 mean_circ: 0.951518
Ran for 45050 frames Cell Events: 1235 mean_circ: 0.951694
Ran for 45550 frames Cell Events: 1244 mean_circ: 0.951719
Ran for 46050 frames Cell Events: 1254 mean_circ: 0.951731
Ran for 47050 frames Cell Events: 1289 mean_circ: 0.951805
Ran for 47550 frames Cell Events: 1295 mean_circ: 0.951764
Ran for 48550 frames Cell Events: 1322 mean_circ: 0.952001
Ran for 49550 frames Cell Events: 1351 mean_circ: 0.951934
Ran for 51050 frames Cell Events: 1397 mean_circ: 0.951814
Ran for 51550 frames Cell Events: 1410 mean_circ: 0.951775
Ran for 52050 frames Cell Events: 1427 mean_circ: 0.951781
Ran for 52550 frames Cell Events: 1436 mean_circ: 0.951895
Ran for 53050 frames Cell Events: 1448 mean_circ: 0.951984
Ran for 53550 frames Cell Events: 1455 mean_circ: 0.952001
Ran for 54050 frames Cell Events: 1468 mean_circ: 0.952048
Ran for 54550 frames Cell Events: 1479 mean_circ: 0.952129
Ran for 55050 frames Cell Events: 1497 mean_circ: 0.952126
Ran for 55550 frames Cell Events: 1509 mean_circ: 0.952107
Ran for 56050 frames Cell Events: 1522 mean_circ: 0.952002
Ran for 56550 frames Cell Events: 1536 mean_circ: 0.951801
Ran for 57050 frames Cell Events: 1547 mean_circ: 0.951818
Ran for 57550 frames Cell Events: 1559 mean_circ: 0.951905
Ran for 58050 frames Cell Events: 1573 mean_circ: 0.951905
Ran for 58550 frames Cell Events: 1584 mean_circ: 0.95202
Ran for 59050 frames Cell Events: 1600 mean_circ: 0.952014
Ran for 59550 frames Cell Events: 1615 mean_circ: 0.951958
Ran for 60050 frames Cell Events: 1622 mean_circ: 0.952013
Ran for 61050 frames Cell Events: 1649 mean_circ: 0.951999
Ran for 61550 frames Cell Events: 1659 mean_circ: 0.951946
Ran for 63050 frames Cell Events: 1696 mean_circ: 0.952047
Ran for 63550 frames Cell Events: 1711 mean_circ: 0.952079
Ran for 64550 frames Cell Events: 1742 mean_circ: 0.952029
Ran for 65050 frames Cell Events: 1753 mean_circ: 0.952121
Ran for 65550 frames Cell Events: 1769 mean_circ: 0.951943
Ran for 66550 frames Cell Events: 1808 mean_circ: 0.951879
Ran for 67050 frames Cell Events: 1819 mean_circ: 0.951894
Ran for 69050 frames Cell Events: 1883 mean_circ: 0.952075
Ran for 69550 frames Cell Events: 1896 mean_circ: 0.952045
Ran for 70050 frames Cell Events: 1911 mean_circ: 0.952024
Ran for 70550 frames Cell Events: 1920 mean_circ: 0.951982
Ran for 71050 frames Cell Events: 1930 mean_circ: 0.951983
Ran for 71550 frames Cell Events: 1947 mean_circ: 0.951961
Ran for 72550 frames Cell Events: 1973 mean_circ: 0.95186
Ran for 73050 frames Cell Events: 1986 mean_circ: 0.951837
Ran for 73550 frames Cell Events: 1996 mean_circ: 0.951743
Ran for 74050 frames Cell Events: 2008 mean_circ: 0.951722
Ran for 74550 frames Cell Events: 2017 mean_circ: 0.951781
Ran for 75050 frames Cell Events: 2028 mean_circ: 0.95176
Ran for 75550 frames Cell Events: 2038 mean_circ: 0.951746
Ran for 76050 frames Cell Events: 2049 mean_circ: 0.951782
Ran for 76550 frames Cell Events: 2065 mean_circ: 0.951831
Ran for 77050 frames Cell Events: 2077 mean_circ: 0.951699
Ran for 77550 frames Cell Events: 2089 mean_circ: 0.951704
Ran for 78050 frames Cell Events: 2104 mean_circ: 0.951774
Ran for 78550 frames Cell Events: 2117 mean_circ: 0.951846
Ran for 79550 frames Cell Events: 2151 mean_circ: 0.951703
Ran for 80050 frames Cell Events: 2163 mean_circ: 0.951702
Ran for 80550 frames Cell Events: 2172 mean_circ: 0.95171
Ran for 81050 frames Cell Events: 2191 mean_circ: 0.951755
Ran for 81550 frames Cell Events: 2199 mean_circ: 0.951764
Ran for 82050 frames Cell Events: 2212 mean_circ: 0.951749
Ran for 82550 frames Cell Events: 2221 mean_circ: 0.951693
Ran for 83050 frames Cell Events: 2231 mean_circ: 0.951663
Ran for 83550 frames Cell Events: 2239 mean_circ: 0.951664
Ran for 84550 frames Cell Events: 2268 mean_circ: 0.951689
Ran for 85050 frames Cell Events: 2280 mean_circ: 0.951688
Ran for 86050 frames Cell Events: 2305 mean_circ: 0.951674
Ran for 86550 frames Cell Events: 2312 mean_circ: 0.951711
Ran for 87050 frames Cell Events: 2326 mean_circ: 0.951739
Ran for 87550 frames Cell Events: 2346 mean_circ: 0.951821
Ran for 88050 frames Cell Events: 2368 mean_circ: 0.951761
Ran for 89050 frames Cell Events: 2406 mean_circ: 0.951667
Ran for 90050 frames Cell Events: 2426 mean_circ: 0.95164
Ran for 90550 frames Cell Events: 2438 mean_circ: 0.951688
Ran for 91550 frames Cell Events: 2471 mean_circ: 0.951616
Ran for 92550 frames Cell Events: 2508 mean_circ: 0.951658
Ran for 93050 frames Cell Events: 2517 mean_circ: 0.9516
Ran for 93550 frames Cell Events: 2533 mean_circ: 0.951572
Ran for 94550 frames Cell Events: 2576 mean_circ: 0.95161
Ran for 95050 frames Cell Events: 2590 mean_circ: 0.951624
Ran for 95550 frames Cell Events: 2612 mean_circ: 0.951643
Ran for 96550 frames Cell Events: 2632 mean_circ: 0.95167
Ran for 97050 frames Cell Events: 2639 mean_circ: 0.951709
Ran for 97550 frames Cell Events: 2646 mean_circ: 0.951736
Ran for 98050 frames Cell Events: 2652 mean_circ: 0.951716
Ran for 98550 frames Cell Events: 2666 mean_circ: 0.951725
Ran for 99550 frames Cell Events: 2702 mean_circ: 0.951689
Ran for 100550 frames Cell Events: 2738 mean_circ: 0.951795
Ran for 101550 frames Cell Events: 2771 mean_circ: 0.951615
Ran for 102050 frames Cell Events: 2783 mean_circ: 0.951571
Ran for 102550 frames Cell Events: 2796 mean_circ: 0.951631
Ran for 103550 frames Cell Events: 2826 mean_circ: 0.95164
Ran for 104550 frames Cell Events: 2844 mean_circ: 0.951659
Ran for 105050 frames Cell Events: 2856 mean_circ: 0.951718
Ran for 105550 frames Cell Events: 2869 mean_circ: 0.951719
Ran for 106050 frames Cell Events: 2883 mean_circ: 0.951766
Ran for 106550 frames Cell Events: 2889 mean_circ: 0.951758
Ran for 108050 frames Cell Events: 2932 mean_circ: 0.95182
Ran for 108550 frames Cell Events: 2943 mean_circ: 0.951841
Ran for 109050 frames Cell Events: 2955 mean_circ: 0.951842
Ran for 109550 frames Cell Events: 2967 mean_circ: 0.95184
Ran for 110050 frames Cell Events: 2980 mean_circ: 0.951758
Ran for 110550 frames Cell Events: 2993 mean_circ: 0.951774
Ran for 111050 frames Cell Events: 3005 mean_circ: 0.951802
Ran for 111550 frames Cell Events: 3015 mean_circ: 0.951818
Ran for 112050 frames Cell Events: 3032 mean_circ: 0.951766
Ran for 112550 frames Cell Events: 3041 mean_circ: 0.95176
Ran for 114050 frames Cell Events: 3071 mean_circ: 0.951711
Ran for 114550 frames Cell Events: 3082 mean_circ: 0.951712
Ran for 115050 frames Cell Events: 3098 mean_circ: 0.95161
Ran for 115550 frames Cell Events: 3119 mean_circ: 0.951659
Ran for 116050 frames Cell Events: 3130 mean_circ: 0.951687
Ran for 116550 frames Cell Events: 3141 mean_circ: 0.951685
Ran for 117550 frames Cell Events: 3173 mean_circ: 0.951622
Ran for 118050 frames Cell Events: 3191 mean_circ: 0.951552
Ran for 118550 frames Cell Events: 3204 mean_circ: 0.951569
Ran for 119050 frames Cell Events: 3223 mean_circ: 0.951544
Ran for 120050 frames Cell Events: 3243 mean_circ: 0.951477
Ran for 120550 frames Cell Events: 3257 mean_circ: 0.951442
Ran for 121050 frames Cell Events: 3279 mean_circ: 0.951412
Ran for 122050 frames Cell Events: 3302 mean_circ: 0.951461
Ran for 122550 frames Cell Events: 3316 mean_circ: 0.951456
Ran for 123050 frames Cell Events: 3327 mean_circ: 0.951464
Ran for 124050 frames Cell Events: 3353 mean_circ: 0.95139
Ran for 124550 frames Cell Events: 3373 mean_circ: 0.951334
Ran for 125550 frames Cell Events: 3394 mean_circ: 0.951238
Ran for 126050 frames Cell Events: 3419 mean_circ: 0.95129
Ran for 127550 frames Cell Events: 3453 mean_circ: 0.95128
Ran for 128050 frames Cell Events: 3465 mean_circ: 0.951278
Ran for 129050 frames Cell Events: 3508 mean_circ: 0.95128
Ran for 129550 frames Cell Events: 3523 mean_circ: 0.951211
Ran for 130050 frames Cell Events: 3538 mean_circ: 0.951224
Ran for 130550 frames Cell Events: 3545 mean_circ: 0.951208
Ran for 131550 frames Cell Events: 3568 mean_circ: 0.9512
Ran for 132550 frames Cell Events: 3596 mean_circ: 0.951241
Ran for 133050 frames Cell Events: 3606 mean_circ: 0.951279
Ran for 133550 frames Cell Events: 3615 mean_circ: 0.951259
Ran for 134050 frames Cell Events: 3634 mean_circ: 0.951344
Ran for 134550 frames Cell Events: 3665 mean_circ: 0.951383
Ran for 135050 frames Cell Events: 3684 mean_circ: 0.951382
Ran for 135550 frames Cell Events: 3702 mean_circ: 0.951382
Ran for 136050 frames Cell Events: 3725 mean_circ: 0.951315
Ran for 137050 frames Cell Events: 3754 mean_circ: 0.951397
Ran for 137550 frames Cell Events: 3766 mean_circ: 0.951458
Ran for 138050 frames Cell Events: 3777 mean_circ: 0.951473
Ran for 139050 frames Cell Events: 3815 mean_circ: 0.951516
Ran for 139550 frames Cell Events: 3835 mean_circ: 0.951535
Ran for 140050 frames Cell Events: 3848 mean_circ: 0.95154
Ran for 141050 frames Cell Events: 3878 mean_circ: 0.951592
Ran for 141550 frames Cell Events: 3890 mean_circ: 0.951569
Ran for 143050 frames Cell Events: 3934 mean_circ: 0.951516
Ran for 143550 frames Cell Events: 3953 mean_circ: 0.95151
Ran for 144050 frames Cell Events: 3964 mean_circ: 0.951588
Ran for 144550 frames Cell Events: 3970 mean_circ: 0.951591
Ran for 146550 frames Cell Events: 4045 mean_circ: 0.951733
Ran for 147050 frames Cell Events: 4061 mean_circ: 0.951767
Ran for 147550 frames Cell Events: 4080 mean_circ: 0.951774
Ran for 148050 frames Cell Events: 4095 mean_circ: 0.951738
Ran for 148550 frames Cell Events: 4122 mean_circ: 0.951721
Ran for 149050 frames Cell Events: 4138 mean_circ: 0.951726
Ran for 149550 frames Cell Events: 4150 mean_circ: 0.951739
Ran for 151050 frames Cell Events: 4206 mean_circ: 0.951672
Ran for 153050 frames Cell Events: 4261 mean_circ: 0.951687
Ran for 153550 frames Cell Events: 4273 mean_circ: 0.951672
Ran for 155050 frames Cell Events: 4313 mean_circ: 0.951623
Ran for 155550 frames Cell Events: 4322 mean_circ: 0.951607
Ran for 156050 frames Cell Events: 4342 mean_circ: 0.951591
Ran for 156550 frames Cell Events: 4355 mean_circ: 0.951575
Ran for 157550 frames Cell Events: 4381 mean_circ: 0.951622
Ran for 158550 frames Cell Events: 4401 mean_circ: 0.951597
Ran for 159550 frames Cell Events: 4434 mean_circ: 0.951587
Ran for 160050 frames Cell Events: 4454 mean_circ: 0.951526
Ran for 160550 frames Cell Events: 4471 mean_circ: 0.951484
Ran for 161050 frames Cell Events: 4484 mean_circ: 0.951502
Ran for 163050 frames Cell Events: 4556 mean_circ: 0.951359
Ran for 164550 frames Cell Events: 4598 mean_circ: 0.951368
Ran for 165050 frames Cell Events: 4611 mean_circ: 0.9514
Ran for 166050 frames Cell Events: 4640 mean_circ: 0.951434
Ran for 166550 frames Cell Events: 4652 mean_circ: 0.95145
Ran for 167550 frames Cell Events: 4682 mean_circ: 0.951488
Ran for 168050 frames Cell Events: 4706 mean_circ: 0.951517
Ran for 169050 frames Cell Events: 4740 mean_circ: 0.951372
Ran for 169550 frames Cell Events: 4753 mean_circ: 0.951361
Ran for 170050 frames Cell Events: 4766 mean_circ: 0.951312
Ran for 171050 frames Cell Events: 4803 mean_circ: 0.951289
Ran for 172550 frames Cell Events: 4841 mean_circ: 0.951262
Ran for 173550 frames Cell Events: 4872 mean_circ: 0.951204
Ran for 175050 frames Cell Events: 4924 mean_circ: 0.951227
Ran for 175550 frames Cell Events: 4939 mean_circ: 0.951223
Ran for 179550 frames Cell Events: 5073 mean_circ: 0.951131
Ran for 180050 frames Cell Events: 5083 mean_circ: 0.951081
Ran for 180550 frames Cell Events: 5093 mean_circ: 0.951101
Ran for 181050 frames Cell Events: 5106 mean_circ: 0.951123
Ran for 181550 frames Cell Events: 5118 mean_circ: 0.951115
Ran for 182050 frames Cell Events: 5128 mean_circ: 0.951143
Ran for 183050 frames Cell Events: 5158 mean_circ: 0.951151
Ran for 183550 frames Cell Events: 5167 mean_circ: 0.951118
Ran for 184050 frames Cell Events: 5176 mean_circ: 0.95111
Ran for 185050 frames Cell Events: 5208 mean_circ: 0.951088
Ran for 185550 frames Cell Events: 5232 mean_circ: 0.951094
Ran for 186050 frames Cell Events: 5244 mean_circ: 0.951093
Ran for 186550 frames Cell Events: 5266 mean_circ: 0.951105
Ran for 187550 frames Cell Events: 5297 mean_circ: 0.951032
Ran for 188050 frames Cell Events: 5317 mean_circ: 0.95105
Ran for 188550 frames Cell Events: 5331 mean_circ: 0.951082
Ran for 189050 frames Cell Events: 5354 mean_circ: 0.951113
Ran for 190550 frames Cell Events: 5401 mean_circ: 0.951137
Ran for 191050 frames Cell Events: 5414 mean_circ: 0.951161
Ran for 191550 frames Cell Events: 5423 mean_circ: 0.951182
Ran for 192050 frames Cell Events: 5438 mean_circ: 0.951193
Ran for 192550 frames Cell Events: 5456 mean_circ: 0.951206
Ran for 193050 frames Cell Events: 5467 mean_circ: 0.951199
Ran for 193550 frames Cell Events: 5479 mean_circ: 0.951208
Ran for 195050 frames Cell Events: 5534 mean_circ: 0.951298
Ran for 195550 frames Cell Events: 5546 mean_circ: 0.951301
Ran for 196550 frames Cell Events: 5577 mean_circ: 0.951258
Ran for 197050 frames Cell Events: 5607 mean_circ: 0.951227
Ran for 198050 frames Cell Events: 5633 mean_circ: 0.951197
Ran for 198550 frames Cell Events: 5645 mean_circ: 0.951185
Ran for 199550 frames Cell Events: 5680 mean_circ: 0.951151
Ran for 200050 frames Cell Events: 5691 mean_circ: 0.951143
Ran for 200550 frames Cell Events: 5706 mean_circ: 0.951171
Ran for 201050 frames Cell Events: 5721 mean_circ: 0.951122
Ran for 201550 frames Cell Events: 5741 mean_circ: 0.95113
Ran for 202050 frames Cell Events: 5757 mean_circ: 0.951135
Ran for 202550 frames Cell Events: 5780 mean_circ: 0.951143
Ran for 203050 frames Cell Events: 5804 mean_circ: 0.951177
Ran for 203550 frames Cell Events: 5816 mean_circ: 0.951146
Ran for 205050 frames Cell Events: 5875 mean_circ: 0.951087
Ran for 206050 frames Cell Events: 5905 mean_circ: 0.950979
Ran for 206550 frames Cell Events: 5922 mean_circ: 0.950981
Ran for 207050 frames Cell Events: 5942 mean_circ: 0.950964
Ran for 207550 frames Cell Events: 5952 mean_circ: 0.950979
Ran for 208050 frames Cell Events: 5962 mean_circ: 0.951001
Ran for 208550 frames Cell Events: 5975 mean_circ: 0.951012
Ran for 209050 frames Cell Events: 5986 mean_circ: 0.951003
Ran for 209550 frames Cell Events: 6002 mean_circ: 0.951028
Ran for 210050 frames Cell Events: 6016 mean_circ: 0.951
Ran for 210550 frames Cell Events: 6024 mean_circ: 0.951008
Ran for 211050 frames Cell Events: 6043 mean_circ: 0.950987
Ran for 212050 frames Cell Events: 6070 mean_circ: 0.951047
Ran for 213550 frames Cell Events: 6128 mean_circ: 0.951025
Ran for 214050 frames Cell Events: 6140 mean_circ: 0.950977
Ran for 214550 frames Cell Events: 6153 mean_circ: 0.950949
Ran for 215050 frames Cell Events: 6168 mean_circ: 0.950948
Ran for 215550 frames Cell Events: 6184 mean_circ: 0.950962
Ran for 216050 frames Cell Events: 6204 mean_circ: 0.950988
Ran for 216550 frames Cell Events: 6218 mean_circ: 0.951009
Ran for 217050 frames Cell Events: 6231 mean_circ: 0.951022
Ran for 218050 frames Cell Events: 6263 mean_circ: 0.95106
Ran for 219550 frames Cell Events: 6305 mean_circ: 0.951083
Ran for 220050 frames Cell Events: 6318 mean_circ: 0.951084
Ran for 220550 frames Cell Events: 6335 mean_circ: 0.951085
Ran for 221050 frames Cell Events: 6350 mean_circ: 0.951063
Ran for 221550 frames Cell Events: 6359 mean_circ: 0.951062
Ran for 222050 frames Cell Events: 6373 mean_circ: 0.951053
Ran for 222550 frames Cell Events: 6385 mean_circ: 0.951066
Ran for 223050 frames Cell Events: 6404 mean_circ: 0.951065
Ran for 223550 frames Cell Events: 6421 mean_circ: 0.951046
Ran for 224550 frames Cell Events: 6462 mean_circ: 0.951051
Ran for 225550 frames Cell Events: 6478 mean_circ: 0.951001
Ran for 226050 frames Cell Events: 6493 mean_circ: 0.950998
Ran for 228050 frames Cell Events: 6537 mean_circ: 0.950969
Ran for 229050 frames Cell Events: 6570 mean_circ: 0.950948
Ran for 229550 frames Cell Events: 6583 mean_circ: 0.950957
Ran for 230050 frames Cell Events: 6601 mean_circ: 0.950955
Ran for 231550 frames Cell Events: 6642 mean_circ: 0.950968
Ran for 233050 frames Cell Events: 6687 mean_circ: 0.950925
Ran for 233550 frames Cell Events: 6703 mean_circ: 0.950923
Ran for 235550 frames Cell Events: 6760 mean_circ: 0.950813
Ran for 236050 frames Cell Events: 6778 mean_circ: 0.950843
Ran for 236550 frames Cell Events: 6797 mean_circ: 0.950836
Ran for 237050 frames Cell Events: 6810 mean_circ: 0.950856
Ran for 237550 frames Cell Events: 6832 mean_circ: 0.950868
Ran for 238050 frames Cell Events: 6846 mean_circ: 0.950885
Ran for 240050 frames Cell Events: 6931 mean_circ: 0.950837
Ran for 240550 frames Cell Events: 6961 mean_circ: 0.950848
Ran for 241050 frames Cell Events: 6979 mean_circ: 0.95086
Ran for 242050 frames Cell Events: 7026 mean_circ: 0.950831
Ran for 242550 frames Cell Events: 7039 mean_circ: 0.950845
Ran for 243050 frames Cell Events: 7047 mean_circ: 0.950853
Ran for 244050 frames Cell Events: 7082 mean_circ: 0.950833
Ran for 244550 frames Cell Events: 7090 mean_circ: 0.950821
Ran for 245050 frames Cell Events: 7098 mean_circ: 0.95082
Ran for 245550 frames Cell Events: 7110 mean_circ: 0.950809
Ran for 246550 frames Cell Events: 7143 mean_circ: 0.950814
Ran for 247050 frames Cell Events: 7159 mean_circ: 0.950799
Ran for 247550 frames Cell Events: 7171 mean_circ: 0.950782
Ran for 248050 frames Cell Events: 7182 mean_circ: 0.950721
Ran for 248550 frames Cell Events: 7197 mean_circ: 0.95072
Ran for 249550 frames Cell Events: 7234 mean_circ: 0.950739
Ran for 250050 frames Cell Events: 7251 mean_circ: 0.950732
Ran for 250550 frames Cell Events: 7271 mean_circ: 0.950761
Ran for 251050 frames Cell Events: 7288 mean_circ: 0.950743
Ran for 252050 frames Cell Events: 7328 mean_circ: 0.950793
Ran for 252550 frames Cell Events: 7346 mean_circ: 0.950782
Ran for 253550 frames Cell Events: 7384 mean_circ: 0.950803
Ran for 254550 frames Cell Events: 7407 mean_circ: 0.950811
Ran for 255050 frames Cell Events: 7424 mean_circ: 0.950814
Ran for 256050 frames Cell Events: 7467 mean_circ: 0.950841
Ran for 256550 frames Cell Events: 7484 mean_circ: 0.950811
Ran for 259550 frames Cell Events: 7587 mean_circ: 0.950833
Ran for 260050 frames Cell Events: 7603 mean_circ: 0.950787
Ran for 260550 frames Cell Events: 7615 mean_circ: 0.950782
Ran for 261050 frames Cell Events: 7627 mean_circ: 0.950773
Ran for 262050 frames Cell Events: 7653 mean_circ: 0.950804
Ran for 263550 frames Cell Events: 7706 mean_circ: 0.950812
Ran for 265550 frames Cell Events: 7773 mean_circ: 0.950841
Ran for 266050 frames Cell Events: 7791 mean_circ: 0.950831
Ran for 267050 frames Cell Events: 7824 mean_circ: 0.950828
Ran for 267550 frames Cell Events: 7842 mean_circ: 0.950833
Ran for 268050 frames Cell Events: 7856 mean_circ: 0.950836
Ran for 269050 frames Cell Events: 7879 mean_circ: 0.950844
Ran for 269550 frames Cell Events: 7894 mean_circ: 0.950864
Ran for 270550 frames Cell Events: 7932 mean_circ: 0.950889
Ran for 271050 frames Cell Events: 7942 mean_circ: 0.950907
Ran for 271550 frames Cell Events: 7952 mean_circ: 0.9509
Ran for 272050 frames Cell Events: 7964 mean_circ: 0.950868
Ran for 273050 frames Cell Events: 7998 mean_circ: 0.950883
Ran for 273550 frames Cell Events: 8013 mean_circ: 0.950872
Ran for 274050 frames Cell Events: 8029 mean_circ: 0.950894
Ran for 274550 frames Cell Events: 8044 mean_circ: 0.950907
Ran for 275050 frames Cell Events: 8058 mean_circ: 0.950917
Ran for 276050 frames Cell Events: 8094 mean_circ: 0.95088
Ran for 276550 frames Cell Events: 8109 mean_circ: 0.95087
Ran for 277550 frames Cell Events: 8146 mean_circ: 0.95087
Ran for 278050 frames Cell Events: 8162 mean_circ: 0.950844
Ran for 278550 frames Cell Events: 8192 mean_circ: 0.950867
Ran for 279050 frames Cell Events: 8206 mean_circ: 0.950846
Ran for 279550 frames Cell Events: 8229 mean_circ: 0.950859
Ran for 280050 frames Cell Events: 8247 mean_circ: 0.950845
Ran for 280550 frames Cell Events: 8267 mean_circ: 0.95086
Ran for 281050 frames Cell Events: 8288 mean_circ: 0.95083
Ran for 281550 frames Cell Events: 8297 mean_circ: 0.950817
Ran for 282050 frames Cell Events: 8310 mean_circ: 0.950791
Ran for 283050 frames Cell Events: 8337 mean_circ: 0.950798
Ran for 283550 frames Cell Events: 8347 mean_circ: 0.950808
Ran for 285050 frames Cell Events: 8419 mean_circ: 0.950819
Ran for 285550 frames Cell Events: 8428 mean_circ: 0.950819
Ran for 286050 frames Cell Events: 8450 mean_circ: 0.950829
Ran for 286550 frames Cell Events: 8462 mean_circ: 0.950783
Ran for 287050 frames Cell Events: 8487 mean_circ: 0.950797
Ran for 287550 frames Cell Events: 8501 mean_circ: 0.950817
Ran for 288050 frames Cell Events: 8512 mean_circ: 0.950804
Ran for 288550 frames Cell Events: 8523 mean_circ: 0.950805
Ran for 289050 frames Cell Events: 8541 mean_circ: 0.950811
Ran for 289550 frames Cell Events: 8554 mean_circ: 0.950819
End this measurment..
Stopping time: 2.45787e+009
****************************************
Measurement finished
Mean Circularitiy: 0.950821
Mean Area: 600.221
Mean FL-1 intensity: 3070.86
Mean FL-2 intensity: 3736.53
Mean FL-3 intensity: 0
frames processed: 289541
Total Time: 144934ms
Number of Runs (new bg img) 0
Frames collected: 289712
Skipped frames: 25380
Rescued Frames: 2909692
Samples DAQ: 72429698
Samples written: 144855758
Samples per Channel: 72427879
FPS: 1998.93
Samples per second: 499731
Expected samples/s: 500000
Events: 8563
Events per second: 59.0822
jumped back (PMT): 5214
#Frames read, frequency
# 0 frames :411956
# 1 frames :146830
# 2 frames :5433
# 3 frames :2467
# 4 frames :1367
# 5 frames :714
# 6 frames :956
# 7 frames :1828
# 8 frames :1320
# 9 frames :912
# 10 frames :818
# 11 frames :1025
# 12 frames :771
# 13 frames :591
# 14 frames :351
# 15 frames :280
# 16 frames :224
# 17 frames :227
# 18 frames :170
# 19 frames :183
# 20 frames :150
# 21 frames :120
# 22 frames :95
# 23 frames :61
# 24 frames :55
# 25 frames :49
# 26 frames :29
# 27 frames :34
# 28 frames :23
# 29 frames :28
# 30 frames :20
# 31 frames :12
# 32 frames :6
# 33 frames :9
# 34 frames :6
# 35 frames :4
# 36 frames :9
# 37 frames :6
# 38 frames :10
# 39 frames :3
# 40 frames :2
# 41 frames :1
# 42 frames :2
# 43 frames :3
# 44 frames :2
# 45 frames :2
# 46 frames :1
# 47 frames :3
# 48 frames :4
# 49 frames :3
# 50 frames :1
# 53 frames :1
# 55 frames :1
# 63 frames :1
M1_para.ini
[General]
Measurement Number = 1
Flow Rate [ul/s] = 0.04
Region = "Channel"
Channel width = 20
Current LED = 100
[Image]
Setup = Cell_Flow_2 + Fluor
Bin Ops = 5
Blur = 0
Trig Thresh = 50
t1 = -256
t2 = -6
Pix Size = 0.34
Cell Min = 6
Cell Max = 50
Thresh = 6
Diff_Method = 1
Margin = 0
#[FLUOR]
#fRT-DC V1.06170206
#Samplerate = 500000
#Bitdepthraw = 16
#Format = int16
#ADCmin = -1
#ADCmax = 1
#FL-Channels = 2
Laser Power 488 [mW] = 10
Laser Power 561 [mW] = 35
Laser Power 640 [mW] = 0
Ambient Temp. [C] = 24.8382
parameters.txt
#fRT-DC Configuration file
# You may change the values here before a measurement.
debug 0
hull 1
x_size 256
y_size 96
x_pos 504
y_pos 464
pix_size 0.34
cell_min 6
cell_max_x 50
cell_max_y 50
cell_aspect_min 0
cell_aspect_max 10
threshold1 -256
threshold2 -6
trig_threshold 50
MARGIN 0
write_videos 0
write_phot_det 0
show_video 1
write_events 1
fps 2000
samplesperframe 300
Vmin -1
Vmax 1
invertCh1 1
invertCh2 1
invertCh3 1
invertChX 1
samplerate 500000
bg_img 100
channel_width 20
current_led 100
pulse_led 2
binary_ops 5
blur 0
median_pmt 5
software_binops 1
flowctrl 0
flowwait 60
numberofchannels 2
firstchannel 4
secondchannel 5
thirdchannel -6
laser488 10
laser561 35
laser640 0
peakcountthreshold 1000
peakDipRatio 0.8
offsetFL1 0
offsetFL2 0
offsetFL3 0
rollingAverage 100
stopCell 10000
stopTime 0
minFL1 400
minFL2 668
minFL3 -32768
maxFL1 32767
maxFL2 32767
maxFL3 32767
setTimingAutomatic 1
plotWidth 0
getBrightness 0
intellPeak 0